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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs5826845

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr19:4407248-4407256 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
delAA / delA / dupA / dupAA / dupA…

delAA / delA / dupA / dupAA / dupAAA / dup(A)4

Variation Type
Indel Insertion and Deletion
Frequency
delA=0.4291 (2259/5265, ALFA)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
CHAF1A : Intron Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 5265 AAAAAAAAA=0.5656 AAAAAAA=0.0000, AAAAAAAA=0.4291, AAAAAAAAAA=0.0000, AAAAAAAAAAA=0.0038, AAAAAAAAAAAA=0.0015 0.704942 0.281008 0.01405 32
European Sub 4117 AAAAAAAAA=0.4460 AAAAAAA=0.0000, AAAAAAAA=0.5472, AAAAAAAAAA=0.0000, AAAAAAAAAAA=0.0049, AAAAAAAAAAAA=0.0019 0.592891 0.387659 0.01945 32
African Sub 942 AAAAAAAAA=1.000 AAAAAAA=0.000, AAAAAAAA=0.000, AAAAAAAAAA=0.000, AAAAAAAAAAA=0.000, AAAAAAAAAAAA=0.000 1.0 0.0 0.0 N/A
African Others Sub 40 AAAAAAAAA=1.00 AAAAAAA=0.00, AAAAAAAA=0.00, AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00 1.0 0.0 0.0 N/A
African American Sub 902 AAAAAAAAA=1.000 AAAAAAA=0.000, AAAAAAAA=0.000, AAAAAAAAAA=0.000, AAAAAAAAAAA=0.000, AAAAAAAAAAAA=0.000 1.0 0.0 0.0 N/A
Asian Sub 14 AAAAAAAAA=1.00 AAAAAAA=0.00, AAAAAAAA=0.00, AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00 1.0 0.0 0.0 N/A
East Asian Sub 10 AAAAAAAAA=1.0 AAAAAAA=0.0, AAAAAAAA=0.0, AAAAAAAAAA=0.0, AAAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0 1.0 0.0 0.0 N/A
Other Asian Sub 4 AAAAAAAAA=1.0 AAAAAAA=0.0, AAAAAAAA=0.0, AAAAAAAAAA=0.0, AAAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0 1.0 0.0 0.0 N/A
Latin American 1 Sub 30 AAAAAAAAA=1.00 AAAAAAA=0.00, AAAAAAAA=0.00, AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00 1.0 0.0 0.0 N/A
Latin American 2 Sub 40 AAAAAAAAA=1.00 AAAAAAA=0.00, AAAAAAAA=0.00, AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00 1.0 0.0 0.0 N/A
South Asian Sub 14 AAAAAAAAA=1.00 AAAAAAA=0.00, AAAAAAAA=0.00, AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00 1.0 0.0 0.0 N/A
Other Sub 108 AAAAAAAAA=0.944 AAAAAAA=0.000, AAAAAAAA=0.056, AAAAAAAAAA=0.000, AAAAAAAAAAA=0.000, AAAAAAAAAAAA=0.000 0.962264 0.037736 0.0 28


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 5265 (A)9=0.5656 delAA=0.0000, delA=0.4291, dupA=0.0000, dupAA=0.0038, dupAAA=0.0015
Allele Frequency Aggregator European Sub 4117 (A)9=0.4460 delAA=0.0000, delA=0.5472, dupA=0.0000, dupAA=0.0049, dupAAA=0.0019
Allele Frequency Aggregator African Sub 942 (A)9=1.000 delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000, dupAAA=0.000
Allele Frequency Aggregator Other Sub 108 (A)9=0.944 delAA=0.000, delA=0.056, dupA=0.000, dupAA=0.000, dupAAA=0.000
Allele Frequency Aggregator Latin American 2 Sub 40 (A)9=1.00 delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00
Allele Frequency Aggregator Latin American 1 Sub 30 (A)9=1.00 delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00
Allele Frequency Aggregator South Asian Sub 14 (A)9=1.00 delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00
Allele Frequency Aggregator Asian Sub 14 (A)9=1.00 delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 19 NC_000019.10:g.4407255_4407256del
GRCh38.p14 chr 19 NC_000019.10:g.4407256del
GRCh38.p14 chr 19 NC_000019.10:g.4407256dup
GRCh38.p14 chr 19 NC_000019.10:g.4407255_4407256dup
GRCh38.p14 chr 19 NC_000019.10:g.4407254_4407256dup
GRCh38.p14 chr 19 NC_000019.10:g.4407253_4407256dup
GRCh37.p13 chr 19 NC_000019.9:g.4407252_4407253del
GRCh37.p13 chr 19 NC_000019.9:g.4407253del
GRCh37.p13 chr 19 NC_000019.9:g.4407253dup
GRCh37.p13 chr 19 NC_000019.9:g.4407252_4407253dup
GRCh37.p13 chr 19 NC_000019.9:g.4407251_4407253dup
GRCh37.p13 chr 19 NC_000019.9:g.4407250_4407253dup
Gene: CHAF1A, chromatin assembly factor 1 subunit A (plus strand)
Molecule type Change Amino acid[Codon] SO Term
CHAF1A transcript NM_005483.3:c.103+1293_10…

NM_005483.3:c.103+1293_103+1294del

N/A Intron Variant
CHAF1A transcript variant X1 XM_011527605.3:c.103+1293…

XM_011527605.3:c.103+1293_103+1294del

N/A Intron Variant
CHAF1A transcript variant X4 XM_011527607.3:c.103+1293…

XM_011527607.3:c.103+1293_103+1294del

N/A Intron Variant
CHAF1A transcript variant X6 XM_047438011.1:c.-469+129…

XM_047438011.1:c.-469+1293_-469+1294del

N/A Intron Variant
CHAF1A transcript variant X7 XM_047438012.1:c.-469+444…

XM_047438012.1:c.-469+4441_-469+4442del

N/A Intron Variant
CHAF1A transcript variant X8 XM_047438013.1:c. N/A Genic Upstream Transcript Variant
CHAF1A transcript variant X3 XR_007066505.1:n. N/A Intron Variant
CHAF1A transcript variant X5 XR_007066507.1:n. N/A Intron Variant
CHAF1A transcript variant X2 XR_936135.3:n. N/A Intron Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement (A)9= delAA delA dupA dupAA dupAAA dup(A)4
GRCh38.p14 chr 19 NC_000019.10:g.4407248_4407256= NC_000019.10:g.4407255_4407256del NC_000019.10:g.4407256del NC_000019.10:g.4407256dup NC_000019.10:g.4407255_4407256dup NC_000019.10:g.4407254_4407256dup NC_000019.10:g.4407253_4407256dup
GRCh37.p13 chr 19 NC_000019.9:g.4407245_4407253= NC_000019.9:g.4407252_4407253del NC_000019.9:g.4407253del NC_000019.9:g.4407253dup NC_000019.9:g.4407252_4407253dup NC_000019.9:g.4407251_4407253dup NC_000019.9:g.4407250_4407253dup
CHAF1A transcript NM_005483.2:c.103+1286= NM_005483.2:c.103+1293_103+1294del NM_005483.2:c.103+1294del NM_005483.2:c.103+1294dup NM_005483.2:c.103+1293_103+1294dup NM_005483.2:c.103+1292_103+1294dup NM_005483.2:c.103+1291_103+1294dup
CHAF1A transcript NM_005483.3:c.103+1286= NM_005483.3:c.103+1293_103+1294del NM_005483.3:c.103+1294del NM_005483.3:c.103+1294dup NM_005483.3:c.103+1293_103+1294dup NM_005483.3:c.103+1292_103+1294dup NM_005483.3:c.103+1291_103+1294dup
CHAF1A transcript variant X1 XM_011527605.3:c.103+1286= XM_011527605.3:c.103+1293_103+1294del XM_011527605.3:c.103+1294del XM_011527605.3:c.103+1294dup XM_011527605.3:c.103+1293_103+1294dup XM_011527605.3:c.103+1292_103+1294dup XM_011527605.3:c.103+1291_103+1294dup
CHAF1A transcript variant X4 XM_011527607.3:c.103+1286= XM_011527607.3:c.103+1293_103+1294del XM_011527607.3:c.103+1294del XM_011527607.3:c.103+1294dup XM_011527607.3:c.103+1293_103+1294dup XM_011527607.3:c.103+1292_103+1294dup XM_011527607.3:c.103+1291_103+1294dup
CHAF1A transcript variant X6 XM_047438011.1:c.-469+1286= XM_047438011.1:c.-469+1293_-469+1294del XM_047438011.1:c.-469+1294del XM_047438011.1:c.-469+1294dup XM_047438011.1:c.-469+1293_-469+1294dup XM_047438011.1:c.-469+1292_-469+1294dup XM_047438011.1:c.-469+1291_-469+1294dup
CHAF1A transcript variant X7 XM_047438012.1:c.-469+4434= XM_047438012.1:c.-469+4441_-469+4442del XM_047438012.1:c.-469+4442del XM_047438012.1:c.-469+4442dup XM_047438012.1:c.-469+4441_-469+4442dup XM_047438012.1:c.-469+4440_-469+4442dup XM_047438012.1:c.-469+4439_-469+4442dup
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

38 SubSNP, 14 Frequency submissions
No Submitter Submission ID Date (Build)
1 DEVINE_LAB ss8089348 Mar 15, 2016 (147)
2 HGSV ss77932442 Sep 08, 2015 (146)
3 HGSV ss81623267 Sep 08, 2015 (146)
4 HGSV ss81862945 Sep 08, 2015 (146)
5 HUMANGENOME_JCVI ss95720005 Feb 06, 2009 (130)
6 BUSHMAN ss193494355 Jul 04, 2010 (137)
7 GMI ss289373072 May 04, 2012 (137)
8 PJP ss294951786 May 09, 2011 (137)
9 1000GENOMES ss327877980 May 09, 2011 (137)
10 LUNTER ss553653218 Apr 25, 2013 (138)
11 SSMP ss664445287 Apr 01, 2015 (144)
12 BILGI_BIOE ss666722568 Apr 25, 2013 (138)
13 DDI ss1536882341 Apr 01, 2015 (144)
14 HAMMER_LAB ss1809183723 Sep 08, 2015 (146)
15 BEROUKHIMLAB ss3644431920 Oct 12, 2018 (152)
16 BIOINF_KMB_FNS_UNIBA ss3645505030 Oct 12, 2018 (152)
17 EVA_DECODE ss3702237342 Jul 13, 2019 (153)
18 EVA_DECODE ss3702237343 Jul 13, 2019 (153)
19 EVA_DECODE ss3702237344 Jul 13, 2019 (153)
20 EVA_DECODE ss3702237345 Jul 13, 2019 (153)
21 EVA ss3835323263 Apr 27, 2020 (154)
22 EVA ss3841283895 Apr 27, 2020 (154)
23 KOGIC ss3980710660 Apr 27, 2020 (154)
24 KOGIC ss3980710661 Apr 27, 2020 (154)
25 GNOMAD ss4326790717 Apr 26, 2021 (155)
26 GNOMAD ss4326790718 Apr 26, 2021 (155)
27 GNOMAD ss4326790719 Apr 26, 2021 (155)
28 GNOMAD ss4326790720 Apr 26, 2021 (155)
29 TOMMO_GENOMICS ss5226484858 Apr 26, 2021 (155)
30 TOMMO_GENOMICS ss5226484859 Apr 26, 2021 (155)
31 TOMMO_GENOMICS ss5226484860 Apr 26, 2021 (155)
32 1000G_HIGH_COVERAGE ss5306305931 Oct 16, 2022 (156)
33 HUGCELL_USP ss5498961329 Oct 16, 2022 (156)
34 TOMMO_GENOMICS ss5784676170 Oct 16, 2022 (156)
35 TOMMO_GENOMICS ss5784676171 Oct 16, 2022 (156)
36 TOMMO_GENOMICS ss5784676172 Oct 16, 2022 (156)
37 EVA ss5840182873 Oct 16, 2022 (156)
38 EVA ss5927103810 Oct 16, 2022 (156)
39 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 532640811 (NC_000019.10:4407247::A 5/132204)
Row 532640812 (NC_000019.10:4407247::AA 2/132200)
Row 532640813 (NC_000019.10:4407247::AAA 37/132106)...

- Apr 26, 2021 (155)
40 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 532640811 (NC_000019.10:4407247::A 5/132204)
Row 532640812 (NC_000019.10:4407247::AA 2/132200)
Row 532640813 (NC_000019.10:4407247::AAA 37/132106)...

- Apr 26, 2021 (155)
41 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 532640811 (NC_000019.10:4407247::A 5/132204)
Row 532640812 (NC_000019.10:4407247::AA 2/132200)
Row 532640813 (NC_000019.10:4407247::AAA 37/132106)...

- Apr 26, 2021 (155)
42 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 532640811 (NC_000019.10:4407247::A 5/132204)
Row 532640812 (NC_000019.10:4407247::AA 2/132200)
Row 532640813 (NC_000019.10:4407247::AAA 37/132106)...

- Apr 26, 2021 (155)
43 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 532640811 (NC_000019.10:4407247::A 5/132204)
Row 532640812 (NC_000019.10:4407247::AA 2/132200)
Row 532640813 (NC_000019.10:4407247::AAA 37/132106)...

- Apr 26, 2021 (155)
44 Korean Genome Project

Submission ignored due to conflicting rows:
Row 37088661 (NC_000019.10:4407247:A: 1097/1832)
Row 37088662 (NC_000019.10:4407248::AAA 10/1832)

- Apr 27, 2020 (154)
45 Korean Genome Project

Submission ignored due to conflicting rows:
Row 37088661 (NC_000019.10:4407247:A: 1097/1832)
Row 37088662 (NC_000019.10:4407248::AAA 10/1832)

- Apr 27, 2020 (154)
46 8.3KJPN

Submission ignored due to conflicting rows:
Row 84454165 (NC_000019.9:4407244:A: 10337/16754)
Row 84454166 (NC_000019.9:4407244::AA 6/16754)
Row 84454167 (NC_000019.9:4407244::AAA 5/16754)

- Apr 26, 2021 (155)
47 8.3KJPN

Submission ignored due to conflicting rows:
Row 84454165 (NC_000019.9:4407244:A: 10337/16754)
Row 84454166 (NC_000019.9:4407244::AA 6/16754)
Row 84454167 (NC_000019.9:4407244::AAA 5/16754)

- Apr 26, 2021 (155)
48 8.3KJPN

Submission ignored due to conflicting rows:
Row 84454165 (NC_000019.9:4407244:A: 10337/16754)
Row 84454166 (NC_000019.9:4407244::AA 6/16754)
Row 84454167 (NC_000019.9:4407244::AAA 5/16754)

- Apr 26, 2021 (155)
49 14KJPN

Submission ignored due to conflicting rows:
Row 118513274 (NC_000019.10:4407247::AA 6/28256)
Row 118513275 (NC_000019.10:4407247:A: 17379/28256)
Row 118513276 (NC_000019.10:4407247::AAA 4/28256)

- Oct 16, 2022 (156)
50 14KJPN

Submission ignored due to conflicting rows:
Row 118513274 (NC_000019.10:4407247::AA 6/28256)
Row 118513275 (NC_000019.10:4407247:A: 17379/28256)
Row 118513276 (NC_000019.10:4407247::AAA 4/28256)

- Oct 16, 2022 (156)
51 14KJPN

Submission ignored due to conflicting rows:
Row 118513274 (NC_000019.10:4407247::AA 6/28256)
Row 118513275 (NC_000019.10:4407247:A: 17379/28256)
Row 118513276 (NC_000019.10:4407247::AAA 4/28256)

- Oct 16, 2022 (156)
52 ALFA NC_000019.10 - 4407248 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs869093420 Jul 19, 2016 (147)
rs34816806 May 23, 2006 (127)
rs60786273 May 26, 2008 (130)
rs67691064 May 11, 2012 (137)
rs67691065 Feb 27, 2009 (130)
rs67691066 Feb 27, 2009 (130)
rs149357316 May 04, 2012 (137)
rs377458983 May 13, 2013 (138)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
10143172150 NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAA

NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAA

(self)
ss289373072, ss294951786, ss327877980, ss553653218 NC_000019.8:4358244:A: NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAA

(self)
ss77932442, ss81623267, ss81862945 NC_000019.8:4358252:A: NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAA

(self)
ss664445287, ss666722568, ss1536882341, ss1809183723, ss3644431920, ss3835323263, ss3841283895, ss5226484858, ss5840182873 NC_000019.9:4407244:A: NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAA

(self)
ss3645505030, ss3702237345, ss3980710660, ss5306305931, ss5498961329, ss5784676171, ss5927103810 NC_000019.10:4407247:A: NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAA

(self)
10143172150 NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAA

NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAA

(self)
ss8089348, ss95720005 NT_011255.14:4347252:A: NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAA

(self)
ss193494355 NT_011295.12:4347247:A: NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAA

(self)
ss4326790717 NC_000019.10:4407247::A NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAAAA

(self)
10143172150 NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAAAA

NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAAAA

(self)
ss3702237344 NC_000019.10:4407248::A NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAAAA

(self)
ss5226484859 NC_000019.9:4407244::AA NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAAAAA

(self)
ss4326790718, ss5784676170 NC_000019.10:4407247::AA NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAAAAA

(self)
10143172150 NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAAAAA

NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAAAAA

(self)
ss3702237343 NC_000019.10:4407248::AA NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAAAAA

(self)
ss5226484860 NC_000019.9:4407244::AAA NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAAAAAA

(self)
ss4326790719, ss5784676172 NC_000019.10:4407247::AAA NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAAAAAA

(self)
10143172150 NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAAAAAA

NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAAAAAA

(self)
ss3702237342, ss3980710661 NC_000019.10:4407248::AAA NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAAAAAA

(self)
ss4326790720 NC_000019.10:4407247::AAAA NC_000019.10:4407247:AAAAAAAAA:AAA…

NC_000019.10:4407247:AAAAAAAAA:AAAAAAAAAAAAA

(self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs5826845

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d