Name: rs58730491
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs58730491

Current Build 156

Released September 21, 2022

Organism
Position: chr2:238384381-238384395 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delATAT / delAT / dupAT / dupATAT …
delATAT / delAT / dupAT / dupATAT / dup(AT)₃ / dup(AT)₄
Variation Type: Indel Insertion and Deletion
Frequency: dupAT=0.03037 (425/13993, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: TRAF3IP1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	13993	TATATATATATATAT=0.96513	TATATATATAT=0.00000, TATATATATATAT=0.00000, TATATATATATATATAT=0.03037, TATATATATATATATATATAT=0.00450, TATATATATATATATATAT=0.00000, TATATATATATATATATATATAT=0.00000	0.955525	0.00425	0.040225	32
European	Sub	10177	TATATATATATATAT=0.95225	TATATATATAT=0.00000, TATATATATATAT=0.00000, TATATATATATATATAT=0.04156, TATATATATATATATATATAT=0.00619, TATATATATATATATATAT=0.00000, TATATATATATATATATATATAT=0.00000	0.937821	0.005983	0.056197	32
African	Sub	2518	TATATATATATATAT=1.0000	TATATATATAT=0.0000, TATATATATATAT=0.0000, TATATATATATATATAT=0.0000, TATATATATATATATATATAT=0.0000, TATATATATATATATATAT=0.0000, TATATATATATATATATATATAT=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	106	TATATATATATATAT=1.000	TATATATATAT=0.000, TATATATATATAT=0.000, TATATATATATATATAT=0.000, TATATATATATATATATATAT=0.000, TATATATATATATATATAT=0.000, TATATATATATATATATATATAT=0.000	1.0	0.0	0.0	N/A
African American	Sub	2412	TATATATATATATAT=1.0000	TATATATATAT=0.0000, TATATATATATAT=0.0000, TATATATATATATATAT=0.0000, TATATATATATATATATATAT=0.0000, TATATATATATATATATAT=0.0000, TATATATATATATATATATATAT=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	100	TATATATATATATAT=1.00	TATATATATAT=0.00, TATATATATATAT=0.00, TATATATATATATATAT=0.00, TATATATATATATATATATAT=0.00, TATATATATATATATATAT=0.00, TATATATATATATATATATATAT=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	76	TATATATATATATAT=1.00	TATATATATAT=0.00, TATATATATATAT=0.00, TATATATATATATATAT=0.00, TATATATATATATATATATAT=0.00, TATATATATATATATATAT=0.00, TATATATATATATATATATATAT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	24	TATATATATATATAT=1.00	TATATATATAT=0.00, TATATATATATAT=0.00, TATATATATATATATAT=0.00, TATATATATATATATATATAT=0.00, TATATATATATATATATAT=0.00, TATATATATATATATATATATAT=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	140	TATATATATATATAT=1.000	TATATATATAT=0.000, TATATATATATAT=0.000, TATATATATATATATAT=0.000, TATATATATATATATATATAT=0.000, TATATATATATATATATAT=0.000, TATATATATATATATATATATAT=0.000	1.0	0.0	0.0	N/A
Latin American 2	Sub	570	TATATATATATATAT=1.000	TATATATATAT=0.000, TATATATATATAT=0.000, TATATATATATATATAT=0.000, TATATATATATATATATATAT=0.000, TATATATATATATATATAT=0.000, TATATATATATATATATATATAT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	74	TATATATATATATAT=1.00	TATATATATAT=0.00, TATATATATATAT=0.00, TATATATATATATATAT=0.00, TATATATATATATATATATAT=0.00, TATATATATATATATATAT=0.00, TATATATATATATATATATATAT=0.00	1.0	0.0	0.0	N/A
Other	Sub	414	TATATATATATATAT=0.995	TATATATATAT=0.000, TATATATATATAT=0.000, TATATATATATATATAT=0.005, TATATATATATATATATATAT=0.000, TATATATATATATATATAT=0.000, TATATATATATATATATATATAT=0.000	0.990338	0.0	0.009662	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	13993	(TA)₇T=0.96513	delATAT=0.00000, delAT=0.00000, dupAT=0.03037, dupATAT=0.00000, dup(AT)₃=0.00450, dup(AT)₄=0.00000
Allele Frequency Aggregator	European	Sub	10177	(TA)₇T=0.95225	delATAT=0.00000, delAT=0.00000, dupAT=0.04156, dupATAT=0.00000, dup(AT)₃=0.00619, dup(AT)₄=0.00000
Allele Frequency Aggregator	African	Sub	2518	(TA)₇T=1.0000	delATAT=0.0000, delAT=0.0000, dupAT=0.0000, dupATAT=0.0000, dup(AT)₃=0.0000, dup(AT)₄=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	570	(TA)₇T=1.000	delATAT=0.000, delAT=0.000, dupAT=0.000, dupATAT=0.000, dup(AT)₃=0.000, dup(AT)₄=0.000
Allele Frequency Aggregator	Other	Sub	414	(TA)₇T=0.995	delATAT=0.000, delAT=0.000, dupAT=0.005, dupATAT=0.000, dup(AT)₃=0.000, dup(AT)₄=0.000
Allele Frequency Aggregator	Latin American 1	Sub	140	(TA)₇T=1.000	delATAT=0.000, delAT=0.000, dupAT=0.000, dupATAT=0.000, dup(AT)₃=0.000, dup(AT)₄=0.000
Allele Frequency Aggregator	Asian	Sub	100	(TA)₇T=1.00	delATAT=0.00, delAT=0.00, dupAT=0.00, dupATAT=0.00, dup(AT)₃=0.00, dup(AT)₄=0.00
Allele Frequency Aggregator	South Asian	Sub	74	(TA)₇T=1.00	delATAT=0.00, delAT=0.00, dupAT=0.00, dupATAT=0.00, dup(AT)₃=0.00, dup(AT)₄=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 2	NC_000002.12:g.238384382AT[5]
GRCh38.p14 chr 2	NC_000002.12:g.238384382AT[6]
GRCh38.p14 chr 2	NC_000002.12:g.238384382AT[8]
GRCh38.p14 chr 2	NC_000002.12:g.238384382AT[9]
GRCh38.p14 chr 2	NC_000002.12:g.238384382AT[10]
GRCh38.p14 chr 2	NC_000002.12:g.238384382AT[11]
GRCh37.p13 chr 2	NC_000002.11:g.239293023AT[5]
GRCh37.p13 chr 2	NC_000002.11:g.239293023AT[6]
GRCh37.p13 chr 2	NC_000002.11:g.239293023AT[8]
GRCh37.p13 chr 2	NC_000002.11:g.239293023AT[9]
GRCh37.p13 chr 2	NC_000002.11:g.239293023AT[10]
GRCh37.p13 chr 2	NC_000002.11:g.239293023AT[11]
TRAF3IP1 RefSeqGene	NG_053055.1:g.68894AT[5]
TRAF3IP1 RefSeqGene	NG_053055.1:g.68894AT[6]
TRAF3IP1 RefSeqGene	NG_053055.1:g.68894AT[8]
TRAF3IP1 RefSeqGene	NG_053055.1:g.68894AT[9]
TRAF3IP1 RefSeqGene	NG_053055.1:g.68894AT[10]
TRAF3IP1 RefSeqGene	NG_053055.1:g.68894AT[11]

Gene: TRAF3IP1, TRAF3 interacting protein 1 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
TRAF3IP1 transcript variant 2	NM_001139490.1:c.1492-130… NM_001139490.1:c.1492-13078TA[5]	N/A	Intron Variant
TRAF3IP1 transcript variant 1	NM_015650.4:c.1690-13078T… NM_015650.4:c.1690-13078TA[5]	N/A	Intron Variant
TRAF3IP1 transcript variant X6	XM_006712414.3:c.1489-130… XM_006712414.3:c.1489-13078TA[5]	N/A	Intron Variant
TRAF3IP1 transcript variant X1	XM_011510944.3:c.1792-130… XM_011510944.3:c.1792-13078TA[5]	N/A	Intron Variant
TRAF3IP1 transcript variant X3	XM_011510945.3:c.1753-130… XM_011510945.3:c.1753-13078TA[5]	N/A	Intron Variant
TRAF3IP1 transcript variant X4	XM_011510946.3:c.1720-130… XM_011510946.3:c.1720-13078TA[5]	N/A	Intron Variant
TRAF3IP1 transcript variant X5	XM_011510948.3:c.1594-130… XM_011510948.3:c.1594-13078TA[5]	N/A	Intron Variant
TRAF3IP1 transcript variant X9	XM_011510950.3:c.658-1307… XM_011510950.3:c.658-13078TA[5]	N/A	Intron Variant
TRAF3IP1 transcript variant X2	XM_017003789.2:c.1789-130… XM_017003789.2:c.1789-13078TA[5]	N/A	Intron Variant
TRAF3IP1 transcript variant X7	XM_047443898.1:c.1420-130… XM_047443898.1:c.1420-13078TA[5]	N/A	Intron Variant
TRAF3IP1 transcript variant X8	XR_922902.3:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(TA)₇T=	delATAT	delAT	dupAT	dupATAT	dup(AT)₃	dup(AT)₄
GRCh38.p14 chr 2	NC_000002.12:g.238384381_238384395=	NC_000002.12:g.238384382AT[5]	NC_000002.12:g.238384382AT[6]	NC_000002.12:g.238384382AT[8]	NC_000002.12:g.238384382AT[9]	NC_000002.12:g.238384382AT[10]	NC_000002.12:g.238384382AT[11]
GRCh37.p13 chr 2	NC_000002.11:g.239293022_239293036=	NC_000002.11:g.239293023AT[5]	NC_000002.11:g.239293023AT[6]	NC_000002.11:g.239293023AT[8]	NC_000002.11:g.239293023AT[9]	NC_000002.11:g.239293023AT[10]	NC_000002.11:g.239293023AT[11]
TRAF3IP1 RefSeqGene	NG_053055.1:g.68893_68907=	NG_053055.1:g.68894AT[5]	NG_053055.1:g.68894AT[6]	NG_053055.1:g.68894AT[8]	NG_053055.1:g.68894AT[9]	NG_053055.1:g.68894AT[10]	NG_053055.1:g.68894AT[11]
TRAF3IP1 transcript variant 2	NM_001139490.1:c.1492-13078=	NM_001139490.1:c.1492-13078TA[5]	NM_001139490.1:c.1492-13078TA[6]	NM_001139490.1:c.1492-13078TA[8]	NM_001139490.1:c.1492-13078TA[9]	NM_001139490.1:c.1492-13078TA[10]	NM_001139490.1:c.1492-13078TA[11]
TRAF3IP1 transcript variant 1	NM_015650.3:c.1690-13078=	NM_015650.3:c.1690-13078TA[5]	NM_015650.3:c.1690-13078TA[6]	NM_015650.3:c.1690-13078TA[8]	NM_015650.3:c.1690-13078TA[9]	NM_015650.3:c.1690-13078TA[10]	NM_015650.3:c.1690-13078TA[11]
TRAF3IP1 transcript variant 1	NM_015650.4:c.1690-13078=	NM_015650.4:c.1690-13078TA[5]	NM_015650.4:c.1690-13078TA[6]	NM_015650.4:c.1690-13078TA[8]	NM_015650.4:c.1690-13078TA[9]	NM_015650.4:c.1690-13078TA[10]	NM_015650.4:c.1690-13078TA[11]
TRAF3IP1 transcript variant X1	XM_005246070.1:c.1420-13078=	XM_005246070.1:c.1420-13078TA[5]	XM_005246070.1:c.1420-13078TA[6]	XM_005246070.1:c.1420-13078TA[8]	XM_005246070.1:c.1420-13078TA[9]	XM_005246070.1:c.1420-13078TA[10]	XM_005246070.1:c.1420-13078TA[11]
TRAF3IP1 transcript variant X6	XM_006712414.3:c.1489-13078=	XM_006712414.3:c.1489-13078TA[5]	XM_006712414.3:c.1489-13078TA[6]	XM_006712414.3:c.1489-13078TA[8]	XM_006712414.3:c.1489-13078TA[9]	XM_006712414.3:c.1489-13078TA[10]	XM_006712414.3:c.1489-13078TA[11]
TRAF3IP1 transcript variant X1	XM_011510944.3:c.1792-13078=	XM_011510944.3:c.1792-13078TA[5]	XM_011510944.3:c.1792-13078TA[6]	XM_011510944.3:c.1792-13078TA[8]	XM_011510944.3:c.1792-13078TA[9]	XM_011510944.3:c.1792-13078TA[10]	XM_011510944.3:c.1792-13078TA[11]
TRAF3IP1 transcript variant X3	XM_011510945.3:c.1753-13078=	XM_011510945.3:c.1753-13078TA[5]	XM_011510945.3:c.1753-13078TA[6]	XM_011510945.3:c.1753-13078TA[8]	XM_011510945.3:c.1753-13078TA[9]	XM_011510945.3:c.1753-13078TA[10]	XM_011510945.3:c.1753-13078TA[11]
TRAF3IP1 transcript variant X4	XM_011510946.3:c.1720-13078=	XM_011510946.3:c.1720-13078TA[5]	XM_011510946.3:c.1720-13078TA[6]	XM_011510946.3:c.1720-13078TA[8]	XM_011510946.3:c.1720-13078TA[9]	XM_011510946.3:c.1720-13078TA[10]	XM_011510946.3:c.1720-13078TA[11]
TRAF3IP1 transcript variant X5	XM_011510948.3:c.1594-13078=	XM_011510948.3:c.1594-13078TA[5]	XM_011510948.3:c.1594-13078TA[6]	XM_011510948.3:c.1594-13078TA[8]	XM_011510948.3:c.1594-13078TA[9]	XM_011510948.3:c.1594-13078TA[10]	XM_011510948.3:c.1594-13078TA[11]
TRAF3IP1 transcript variant X9	XM_011510950.3:c.658-13078=	XM_011510950.3:c.658-13078TA[5]	XM_011510950.3:c.658-13078TA[6]	XM_011510950.3:c.658-13078TA[8]	XM_011510950.3:c.658-13078TA[9]	XM_011510950.3:c.658-13078TA[10]	XM_011510950.3:c.658-13078TA[11]
TRAF3IP1 transcript variant X2	XM_017003789.2:c.1789-13078=	XM_017003789.2:c.1789-13078TA[5]	XM_017003789.2:c.1789-13078TA[6]	XM_017003789.2:c.1789-13078TA[8]	XM_017003789.2:c.1789-13078TA[9]	XM_017003789.2:c.1789-13078TA[10]	XM_017003789.2:c.1789-13078TA[11]
TRAF3IP1 transcript variant X7	XM_047443898.1:c.1420-13078=	XM_047443898.1:c.1420-13078TA[5]	XM_047443898.1:c.1420-13078TA[6]	XM_047443898.1:c.1420-13078TA[8]	XM_047443898.1:c.1420-13078TA[9]	XM_047443898.1:c.1420-13078TA[10]	XM_047443898.1:c.1420-13078TA[11]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

22 SubSNP, 16 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HGSV	ss81815147	Dec 15, 2007 (129)
2	HUMANGENOME_JCVI	ss96738829	Feb 13, 2009 (130)
3	SWEGEN	ss2991617856	Nov 08, 2017 (151)
4	SWEGEN	ss2991617858	Nov 08, 2017 (151)
5	KOGIC	ss3950413000	Apr 25, 2020 (154)
6	KOGIC	ss3950413001	Apr 25, 2020 (154)
7	KOGIC	ss3950413004	Apr 25, 2020 (154)
8	GNOMAD	ss4063781668	Apr 26, 2021 (155)
9	GNOMAD	ss4063781669	Apr 26, 2021 (155)
10	GNOMAD	ss4063781670	Apr 26, 2021 (155)
11	GNOMAD	ss4063781671	Apr 26, 2021 (155)
12	GNOMAD	ss4063781683	Apr 26, 2021 (155)
13	GNOMAD	ss4063781684	Apr 26, 2021 (155)
14	TOMMO_GENOMICS	ss5157219996	Apr 26, 2021 (155)
15	TOMMO_GENOMICS	ss5157219998	Apr 26, 2021 (155)
16	TOMMO_GENOMICS	ss5157220000	Apr 26, 2021 (155)
17	1000G_HIGH_COVERAGE	ss5252593853	Oct 12, 2022 (156)
18	HUGCELL_USP	ss5452150082	Oct 12, 2022 (156)
19	HUGCELL_USP	ss5452150086	Oct 12, 2022 (156)
20	TOMMO_GENOMICS	ss5688319598	Oct 12, 2022 (156)
21	TOMMO_GENOMICS	ss5688319600	Oct 12, 2022 (156)
22	TOMMO_GENOMICS	ss5688319601	Oct 12, 2022 (156)
23	gnomAD - Genomes Submission ignored due to conflicting rows: Row 95468628 (NC_000002.12:238384380::TA 9907/131442) Row 95468629 (NC_000002.12:238384380::TATA 21/131708) Row 95468630 (NC_000002.12:238384380::TATATA 562/131710)...	-	Apr 26, 2021 (155)
24	gnomAD - Genomes Submission ignored due to conflicting rows: Row 95468628 (NC_000002.12:238384380::TA 9907/131442) Row 95468629 (NC_000002.12:238384380::TATA 21/131708) Row 95468630 (NC_000002.12:238384380::TATATA 562/131710)...	-	Apr 26, 2021 (155)
25	gnomAD - Genomes Submission ignored due to conflicting rows: Row 95468628 (NC_000002.12:238384380::TA 9907/131442) Row 95468629 (NC_000002.12:238384380::TATA 21/131708) Row 95468630 (NC_000002.12:238384380::TATATA 562/131710)...	-	Apr 26, 2021 (155)
26	gnomAD - Genomes Submission ignored due to conflicting rows: Row 95468628 (NC_000002.12:238384380::TA 9907/131442) Row 95468629 (NC_000002.12:238384380::TATA 21/131708) Row 95468630 (NC_000002.12:238384380::TATATA 562/131710)...	-	Apr 26, 2021 (155)
27	gnomAD - Genomes Submission ignored due to conflicting rows: Row 95468628 (NC_000002.12:238384380::TA 9907/131442) Row 95468629 (NC_000002.12:238384380::TATA 21/131708) Row 95468630 (NC_000002.12:238384380::TATATA 562/131710)...	-	Apr 26, 2021 (155)
28	gnomAD - Genomes Submission ignored due to conflicting rows: Row 95468628 (NC_000002.12:238384380::TA 9907/131442) Row 95468629 (NC_000002.12:238384380::TATA 21/131708) Row 95468630 (NC_000002.12:238384380::TATATA 562/131710)...	-	Apr 26, 2021 (155)
29	Korean Genome Project Submission ignored due to conflicting rows: Row 6791001 (NC_000002.12:238384380:TA: 12/1832) Row 6791002 (NC_000002.12:238384382::TA 69/1832) Row 6791005 (NC_000002.12:238384382::TATATA 2/1832)	-	Apr 25, 2020 (154)
30	Korean Genome Project Submission ignored due to conflicting rows: Row 6791001 (NC_000002.12:238384380:TA: 12/1832) Row 6791002 (NC_000002.12:238384382::TA 69/1832) Row 6791005 (NC_000002.12:238384382::TATATA 2/1832)	-	Apr 25, 2020 (154)
31	Korean Genome Project Submission ignored due to conflicting rows: Row 6791001 (NC_000002.12:238384380:TA: 12/1832) Row 6791002 (NC_000002.12:238384382::TA 69/1832) Row 6791005 (NC_000002.12:238384382::TATATA 2/1832)	-	Apr 25, 2020 (154)
32	8.3KJPN Submission ignored due to conflicting rows: Row 15189303 (NC_000002.11:239293021::TA 394/16760) Row 15189305 (NC_000002.11:239293021::TATATA 97/16760) Row 15189307 (NC_000002.11:239293021::TATA 11/16760)	-	Apr 26, 2021 (155)
33	8.3KJPN Submission ignored due to conflicting rows: Row 15189303 (NC_000002.11:239293021::TA 394/16760) Row 15189305 (NC_000002.11:239293021::TATATA 97/16760) Row 15189307 (NC_000002.11:239293021::TATA 11/16760)	-	Apr 26, 2021 (155)
34	8.3KJPN Submission ignored due to conflicting rows: Row 15189303 (NC_000002.11:239293021::TA 394/16760) Row 15189305 (NC_000002.11:239293021::TATATA 97/16760) Row 15189307 (NC_000002.11:239293021::TATA 11/16760)	-	Apr 26, 2021 (155)
35	14KJPN Submission ignored due to conflicting rows: Row 22156702 (NC_000002.12:238384380::TA 629/28256) Row 22156704 (NC_000002.12:238384380::TATA 19/28256) Row 22156705 (NC_000002.12:238384380::TATATA 150/28256)	-	Oct 12, 2022 (156)
36	14KJPN Submission ignored due to conflicting rows: Row 22156702 (NC_000002.12:238384380::TA 629/28256) Row 22156704 (NC_000002.12:238384380::TATA 19/28256) Row 22156705 (NC_000002.12:238384380::TATATA 150/28256)	-	Oct 12, 2022 (156)
37	14KJPN Submission ignored due to conflicting rows: Row 22156702 (NC_000002.12:238384380::TA 629/28256) Row 22156704 (NC_000002.12:238384380::TATA 19/28256) Row 22156705 (NC_000002.12:238384380::TATATA 150/28256)	-	Oct 12, 2022 (156)
38	ALFA	NC_000002.12 - 238384381	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4063781684, ss5452150086	NC_000002.12:238384380:TATA:	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATAT	(self)
6843740768	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATAT	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATAT	(self)
ss3950413000, ss4063781683	NC_000002.12:238384380:TA:	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATAT	(self)
6843740768	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATAT	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATAT	(self)
ss2991617856, ss5157219996	NC_000002.11:239293021::TA	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATAT	(self)
ss4063781668, ss5252593853, ss5452150082, ss5688319598	NC_000002.12:238384380::TA	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATAT	(self)
6843740768	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATAT	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATAT	(self)
ss3950413001	NC_000002.12:238384382::TA	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATAT	(self)
ss96738829	NT_005120.16:5239280::TA	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATAT	(self)
ss81815147	NT_005120.16:5239295::AT	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATAT	(self)
ss5157220000	NC_000002.11:239293021::TATA	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATATAT	(self)
ss4063781669, ss5688319600	NC_000002.12:238384380::TATA	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATATAT	(self)
6843740768	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATATAT	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATATAT	(self)
ss2991617858, ss5157219998	NC_000002.11:239293021::TATATA	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATATATAT	(self)
ss4063781670, ss5688319601	NC_000002.12:238384380::TATATA	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATATATAT	(self)
6843740768	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATATATAT	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATATATAT	(self)
ss3950413004	NC_000002.12:238384382::TATATA	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATATATAT	(self)
ss4063781671	NC_000002.12:238384380::TATATATA	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATATATATAT	(self)
6843740768	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATATATATAT	NC_000002.12:238384380:TATATATATAT… NC_000002.12:238384380:TATATATATATATAT:TATATATATATATATATATATAT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs58730491

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs58730491