Name: rs5877122
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs5877122

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr6:68055831-68055845 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(A)₄ / delAAA / delAA / delA / …
del(A)₄ / delAAA / delAA / delA / dupA / dupAA / dupAAA / dup(A)₅ / dup(A)₁₃ / dup(A)₁₄ / dup(A)₁₅ / ins(A)₁₆
Variation Type: Indel Insertion and Deletion
Frequency: (A)₁₅=0.4201 (2104/5008, 1000G)
del(A)₄=0.0000 (0/1824, ALFA)
delAAA=0.0000 (0/1824, ALFA) (+ 5 more)
delAA=0.0000 (0/1824, ALFA)
delA=0.0000 (0/1824, ALFA)
dupA=0.0000 (0/1824, ALFA)
dupAA=0.0000 (0/1824, ALFA)
(A)₁₅=0.35 (14/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: LOC102723883 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	1824	AAAAAAAAAAAAAAA=1.0000	AAAAAAAAAAA=0.0000, AAAAAAAAAAAA=0.0000, AAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000	1.0	0.0	0.0	N/A
European	Sub	776	AAAAAAAAAAAAAAA=1.000	AAAAAAAAAAA=0.000, AAAAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
African	Sub	924	AAAAAAAAAAAAAAA=1.000	AAAAAAAAAAA=0.000, AAAAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
African Others	Sub	50	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
African American	Sub	874	AAAAAAAAAAAAAAA=1.000	AAAAAAAAAAA=0.000, AAAAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
Asian	Sub	0	AAAAAAAAAAAAAAA=0	AAAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0	0	0	0	N/A
East Asian	Sub	0	AAAAAAAAAAAAAAA=0	AAAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0	0	0	0	N/A
Other Asian	Sub	0	AAAAAAAAAAAAAAA=0	AAAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0	0	0	0	N/A
Latin American 1	Sub	16	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	38	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
South Asian	Sub	18	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
Other	Sub	52	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
1000Genomes	Global	Study-wide	5008	- No frequency provided	dupA=0.5799
1000Genomes	African	Sub	1322	- No frequency provided	dupA=0.3820
1000Genomes	East Asian	Sub	1008	- No frequency provided	dupA=0.7411
1000Genomes	Europe	Sub	1006	- No frequency provided	dupA=0.6173
1000Genomes	South Asian	Sub	978	- No frequency provided	dupA=0.579
1000Genomes	American	Sub	694	- No frequency provided	dupA=0.670
Allele Frequency Aggregator	Total	Global	1824	(A)₁₅=1.0000	del(A)₄=0.0000, delAAA=0.0000, delAA=0.0000, delA=0.0000, dupA=0.0000, dupAA=0.0000
Allele Frequency Aggregator	African	Sub	924	(A)₁₅=1.000	del(A)₄=0.000, delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000
Allele Frequency Aggregator	European	Sub	776	(A)₁₅=1.000	del(A)₄=0.000, delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000
Allele Frequency Aggregator	Other	Sub	52	(A)₁₅=1.00	del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	Latin American 2	Sub	38	(A)₁₅=1.00	del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	South Asian	Sub	18	(A)₁₅=1.00	del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	Latin American 1	Sub	16	(A)₁₅=1.00	del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	Asian	Sub	0	(A)₁₅=0	del(A)₄=0, delAAA=0, delAA=0, delA=0, dupA=0, dupAA=0
The Danish reference pan genome	Danish	Study-wide	40	- No frequency provided	dupA=0.65

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 6	NC_000006.12:g.68055842_68055845del
GRCh38.p14 chr 6	NC_000006.12:g.68055843_68055845del
GRCh38.p14 chr 6	NC_000006.12:g.68055844_68055845del
GRCh38.p14 chr 6	NC_000006.12:g.68055845del
GRCh38.p14 chr 6	NC_000006.12:g.68055845dup
GRCh38.p14 chr 6	NC_000006.12:g.68055844_68055845dup
GRCh38.p14 chr 6	NC_000006.12:g.68055843_68055845dup
GRCh38.p14 chr 6	NC_000006.12:g.68055841_68055845dup
GRCh38.p14 chr 6	NC_000006.12:g.68055833_68055845dup
GRCh38.p14 chr 6	NC_000006.12:g.68055832_68055845dup
GRCh38.p14 chr 6	NC_000006.12:g.68055831_68055845dup
GRCh38.p14 chr 6	NC_000006.12:g.68055845_68055846insAAAAAAAAAAAAAAAA
GRCh37.p13 chr 6	NC_000006.11:g.68765734_68765737del
GRCh37.p13 chr 6	NC_000006.11:g.68765735_68765737del
GRCh37.p13 chr 6	NC_000006.11:g.68765736_68765737del
GRCh37.p13 chr 6	NC_000006.11:g.68765737del
GRCh37.p13 chr 6	NC_000006.11:g.68765737dup
GRCh37.p13 chr 6	NC_000006.11:g.68765736_68765737dup
GRCh37.p13 chr 6	NC_000006.11:g.68765735_68765737dup
GRCh37.p13 chr 6	NC_000006.11:g.68765733_68765737dup
GRCh37.p13 chr 6	NC_000006.11:g.68765725_68765737dup
GRCh37.p13 chr 6	NC_000006.11:g.68765724_68765737dup
GRCh37.p13 chr 6	NC_000006.11:g.68765723_68765737dup
GRCh37.p13 chr 6	NC_000006.11:g.68765737_68765738insAAAAAAAAAAAAAAAA

Gene: LOC102723883, uncharacterized LOC102723883 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LOC102723883 transcript	NR_125869.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(A)₁₅=	del(A)₄	delAAA	delAA	delA	dupA	dupAA	dupAAA	dup(A)₅	dup(A)₁₃	dup(A)₁₄	dup(A)₁₅	ins(A)₁₆
GRCh38.p14 chr 6	NC_000006.12:g.68055831_68055845=	NC_000006.12:g.68055842_68055845del	NC_000006.12:g.68055843_68055845del	NC_000006.12:g.68055844_68055845del	NC_000006.12:g.68055845del	NC_000006.12:g.68055845dup	NC_000006.12:g.68055844_68055845dup	NC_000006.12:g.68055843_68055845dup	NC_000006.12:g.68055841_68055845dup	NC_000006.12:g.68055833_68055845dup	NC_000006.12:g.68055832_68055845dup	NC_000006.12:g.68055831_68055845dup	NC_000006.12:g.68055845_68055846insAAAAAAAAAAAAAAAA
GRCh37.p13 chr 6	NC_000006.11:g.68765723_68765737=	NC_000006.11:g.68765734_68765737del	NC_000006.11:g.68765735_68765737del	NC_000006.11:g.68765736_68765737del	NC_000006.11:g.68765737del	NC_000006.11:g.68765737dup	NC_000006.11:g.68765736_68765737dup	NC_000006.11:g.68765735_68765737dup	NC_000006.11:g.68765733_68765737dup	NC_000006.11:g.68765725_68765737dup	NC_000006.11:g.68765724_68765737dup	NC_000006.11:g.68765723_68765737dup	NC_000006.11:g.68765737_68765738insAAAAAAAAAAAAAAAA

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

57 SubSNP, 26 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss42813289	Mar 14, 2006 (126)
2	HUMANGENOME_JCVI	ss98455815	Feb 05, 2009 (138)
3	GMI	ss288753238	May 04, 2012 (138)
4	PJP	ss295286645	May 09, 2011 (138)
5	PJP	ss295286646	May 09, 2011 (138)
6	SSMP	ss663710276	Apr 01, 2015 (144)
7	BILGI_BIOE	ss666359545	Apr 25, 2013 (138)
8	SSIP	ss947171678	Oct 12, 2018 (152)
9	1000GENOMES	ss1375632470	Aug 21, 2014 (142)
10	EVA_GENOME_DK	ss1576778846	Apr 01, 2015 (144)
11	EVA_UK10K_ALSPAC	ss1705202202	Apr 01, 2015 (144)
12	EVA_UK10K_ALSPAC	ss1705202204	Apr 01, 2015 (144)
13	EVA_UK10K_TWINSUK	ss1705202408	Apr 01, 2015 (144)
14	EVA_UK10K_TWINSUK	ss1705202409	Apr 01, 2015 (144)
15	SWEGEN	ss2999263612	Nov 08, 2017 (151)
16	URBANLAB	ss3648378483	Oct 12, 2018 (152)
17	EVA_DECODE	ss3717435917	Jul 13, 2019 (153)
18	EVA_DECODE	ss3717435918	Jul 13, 2019 (153)
19	EVA_DECODE	ss3717435919	Jul 13, 2019 (153)
20	INMEGENXS	ss3745684138	Jul 13, 2019 (153)
21	PACBIO	ss3785506342	Jul 13, 2019 (153)
22	PACBIO	ss3790852555	Jul 13, 2019 (153)
23	PACBIO	ss3795731578	Jul 13, 2019 (153)
24	KHV_HUMAN_GENOMES	ss3808303976	Jul 13, 2019 (153)
25	EVA	ss3829982403	Apr 26, 2020 (154)
26	EVA	ss3838471390	Apr 26, 2020 (154)
27	EVA	ss3843918303	Apr 26, 2020 (154)
28	KOGIC	ss3959266905	Apr 26, 2020 (154)
29	KOGIC	ss3959266906	Apr 26, 2020 (154)
30	GNOMAD	ss4143831547	Apr 26, 2021 (155)
31	GNOMAD	ss4143831548	Apr 26, 2021 (155)
32	GNOMAD	ss4143831549	Apr 26, 2021 (155)
33	GNOMAD	ss4143831550	Apr 26, 2021 (155)
34	GNOMAD	ss4143831551	Apr 26, 2021 (155)
35	GNOMAD	ss4143831552	Apr 26, 2021 (155)
36	GNOMAD	ss4143831553	Apr 26, 2021 (155)
37	GNOMAD	ss4143831554	Apr 26, 2021 (155)
38	GNOMAD	ss4143831555	Apr 26, 2021 (155)
39	GNOMAD	ss4143831556	Apr 26, 2021 (155)
40	TOMMO_GENOMICS	ss5178009948	Apr 26, 2021 (155)
41	TOMMO_GENOMICS	ss5178009949	Apr 26, 2021 (155)
42	TOMMO_GENOMICS	ss5178009950	Apr 26, 2021 (155)
43	1000G_HIGH_COVERAGE	ss5268854275	Oct 13, 2022 (156)
44	1000G_HIGH_COVERAGE	ss5268854277	Oct 13, 2022 (156)
45	1000G_HIGH_COVERAGE	ss5268854278	Oct 13, 2022 (156)
46	1000G_HIGH_COVERAGE	ss5268854279	Oct 13, 2022 (156)
47	1000G_HIGH_COVERAGE	ss5268854280	Oct 13, 2022 (156)
48	HUGCELL_USP	ss5466459076	Oct 13, 2022 (156)
49	HUGCELL_USP	ss5466459077	Oct 13, 2022 (156)
50	HUGCELL_USP	ss5466459078	Oct 13, 2022 (156)
51	HUGCELL_USP	ss5466459080	Oct 13, 2022 (156)
52	TOMMO_GENOMICS	ss5716345100	Oct 13, 2022 (156)
53	TOMMO_GENOMICS	ss5716345101	Oct 13, 2022 (156)
54	TOMMO_GENOMICS	ss5716345103	Oct 13, 2022 (156)
55	TOMMO_GENOMICS	ss5716345104	Oct 13, 2022 (156)
56	EVA	ss5842408931	Oct 13, 2022 (156)
57	EVA	ss5842408932	Oct 13, 2022 (156)
58	1000Genomes	NC_000006.11 - 68765723	Oct 12, 2018 (152)
59	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 18041597 (NC_000006.11:68765722::A 2512/3854) Row 18041598 (NC_000006.11:68765722::AA 160/3854)	-	Oct 12, 2018 (152)
60	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 18041597 (NC_000006.11:68765722::A 2512/3854) Row 18041598 (NC_000006.11:68765722::AA 160/3854)	-	Oct 12, 2018 (152)
61	The Danish reference pan genome	NC_000006.11 - 68765723	Apr 26, 2020 (154)
62	gnomAD - Genomes Submission ignored due to conflicting rows: Row 228570514 (NC_000006.12:68055830::A 69914/106186) Row 228570515 (NC_000006.12:68055830::AA 1674/106286) Row 228570516 (NC_000006.12:68055830::AAA 7/106350)...	-	Apr 26, 2021 (155)
63	gnomAD - Genomes Submission ignored due to conflicting rows: Row 228570514 (NC_000006.12:68055830::A 69914/106186) Row 228570515 (NC_000006.12:68055830::AA 1674/106286) Row 228570516 (NC_000006.12:68055830::AAA 7/106350)...	-	Apr 26, 2021 (155)
64	gnomAD - Genomes Submission ignored due to conflicting rows: Row 228570514 (NC_000006.12:68055830::A 69914/106186) Row 228570515 (NC_000006.12:68055830::AA 1674/106286) Row 228570516 (NC_000006.12:68055830::AAA 7/106350)...	-	Apr 26, 2021 (155)
65	gnomAD - Genomes Submission ignored due to conflicting rows: Row 228570514 (NC_000006.12:68055830::A 69914/106186) Row 228570515 (NC_000006.12:68055830::AA 1674/106286) Row 228570516 (NC_000006.12:68055830::AAA 7/106350)...	-	Apr 26, 2021 (155)
66	gnomAD - Genomes Submission ignored due to conflicting rows: Row 228570514 (NC_000006.12:68055830::A 69914/106186) Row 228570515 (NC_000006.12:68055830::AA 1674/106286) Row 228570516 (NC_000006.12:68055830::AAA 7/106350)...	-	Apr 26, 2021 (155)
67	gnomAD - Genomes Submission ignored due to conflicting rows: Row 228570514 (NC_000006.12:68055830::A 69914/106186) Row 228570515 (NC_000006.12:68055830::AA 1674/106286) Row 228570516 (NC_000006.12:68055830::AAA 7/106350)...	-	Apr 26, 2021 (155)
68	gnomAD - Genomes Submission ignored due to conflicting rows: Row 228570514 (NC_000006.12:68055830::A 69914/106186) Row 228570515 (NC_000006.12:68055830::AA 1674/106286) Row 228570516 (NC_000006.12:68055830::AAA 7/106350)...	-	Apr 26, 2021 (155)
69	gnomAD - Genomes Submission ignored due to conflicting rows: Row 228570514 (NC_000006.12:68055830::A 69914/106186) Row 228570515 (NC_000006.12:68055830::AA 1674/106286) Row 228570516 (NC_000006.12:68055830::AAA 7/106350)...	-	Apr 26, 2021 (155)
70	gnomAD - Genomes Submission ignored due to conflicting rows: Row 228570514 (NC_000006.12:68055830::A 69914/106186) Row 228570515 (NC_000006.12:68055830::AA 1674/106286) Row 228570516 (NC_000006.12:68055830::AAA 7/106350)...	-	Apr 26, 2021 (155)
71	gnomAD - Genomes Submission ignored due to conflicting rows: Row 228570514 (NC_000006.12:68055830::A 69914/106186) Row 228570515 (NC_000006.12:68055830::AA 1674/106286) Row 228570516 (NC_000006.12:68055830::AAA 7/106350)...	-	Apr 26, 2021 (155)
72	Korean Genome Project Submission ignored due to conflicting rows: Row 15644906 (NC_000006.12:68055830::A 1322/1818) Row 15644907 (NC_000006.12:68055830::AA 157/1818)	-	Apr 26, 2020 (154)
73	Korean Genome Project Submission ignored due to conflicting rows: Row 15644906 (NC_000006.12:68055830::A 1322/1818) Row 15644907 (NC_000006.12:68055830::AA 157/1818)	-	Apr 26, 2020 (154)
74	8.3KJPN Submission ignored due to conflicting rows: Row 35979255 (NC_000006.11:68765722::A 14064/16694) Row 35979256 (NC_000006.11:68765722::AA 255/16694) Row 35979257 (NC_000006.11:68765722:A: 7/16694)	-	Apr 26, 2021 (155)
75	8.3KJPN Submission ignored due to conflicting rows: Row 35979255 (NC_000006.11:68765722::A 14064/16694) Row 35979256 (NC_000006.11:68765722::AA 255/16694) Row 35979257 (NC_000006.11:68765722:A: 7/16694)	-	Apr 26, 2021 (155)
76	8.3KJPN Submission ignored due to conflicting rows: Row 35979255 (NC_000006.11:68765722::A 14064/16694) Row 35979256 (NC_000006.11:68765722::AA 255/16694) Row 35979257 (NC_000006.11:68765722:A: 7/16694)	-	Apr 26, 2021 (155)
77	14KJPN Submission ignored due to conflicting rows: Row 50182204 (NC_000006.12:68055830::A 23756/28256) Row 50182205 (NC_000006.12:68055830::AA 434/28256) Row 50182207 (NC_000006.12:68055830:A: 9/28256)...	-	Oct 13, 2022 (156)
78	14KJPN Submission ignored due to conflicting rows: Row 50182204 (NC_000006.12:68055830::A 23756/28256) Row 50182205 (NC_000006.12:68055830::AA 434/28256) Row 50182207 (NC_000006.12:68055830:A: 9/28256)...	-	Oct 13, 2022 (156)
79	14KJPN Submission ignored due to conflicting rows: Row 50182204 (NC_000006.12:68055830::A 23756/28256) Row 50182205 (NC_000006.12:68055830::AA 434/28256) Row 50182207 (NC_000006.12:68055830:A: 9/28256)...	-	Oct 13, 2022 (156)
80	14KJPN Submission ignored due to conflicting rows: Row 50182204 (NC_000006.12:68055830::A 23756/28256) Row 50182205 (NC_000006.12:68055830::AA 434/28256) Row 50182207 (NC_000006.12:68055830:A: 9/28256)...	-	Oct 13, 2022 (156)
81	UK 10K study - Twins Submission ignored due to conflicting rows: Row 18041597 (NC_000006.11:68765722::A 2460/3708) Row 18041598 (NC_000006.11:68765722::AA 166/3708)	-	Oct 12, 2018 (152)
82	UK 10K study - Twins Submission ignored due to conflicting rows: Row 18041597 (NC_000006.11:68765722::A 2460/3708) Row 18041598 (NC_000006.11:68765722::AA 166/3708)	-	Oct 12, 2018 (152)
83	ALFA	NC_000006.12 - 68055831	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs5877123	May 15, 2013 (138)
rs11441164	May 11, 2012 (137)
rs34201391	May 11, 2012 (137)
rs35971229	May 11, 2012 (137)
rs67768343	May 11, 2012 (137)
rs67768344	Feb 27, 2009 (130)
rs67768345	Feb 27, 2009 (130)
rs140492809	Sep 17, 2011 (135)
rs150468374	Sep 17, 2011 (135)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
8105358899	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAA	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAA	(self)
ss5268854280	NC_000006.12:68055830:AAA:	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAA
8105358899	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAA	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss4143831556, ss5268854279, ss5466459078	NC_000006.12:68055830:AA:	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
8105358899	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss2999263612, ss5178009950	NC_000006.11:68765722:A:	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3717435919, ss4143831555, ss5268854278, ss5466459080, ss5716345103	NC_000006.12:68055830:A:	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
8105358899	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss295286645	NC_000006.10:68822444::A	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss288753238, ss295286646	NC_000006.10:68822458::A	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
32384492, 1081914, ss663710276, ss666359545, ss1375632470, ss1576778846, ss1705202202, ss1705202408, ss3785506342, ss3790852555, ss3795731578, ss3829982403, ss3838471390, ss5178009948, ss5842408931	NC_000006.11:68765722::A	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss947171678	NC_000006.11:68765723::A	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss3648378483, ss3808303976, ss3843918303, ss3959266905, ss4143831547, ss5268854275, ss5466459076, ss5716345100	NC_000006.12:68055830::A	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
8105358899	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss3717435918	NC_000006.12:68055831::A	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss42813289	NT_007299.13:6885556::A	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss98455815	NT_007299.13:6885571::A	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss1705202204, ss1705202409, ss3745684138, ss5178009949, ss5842408932	NC_000006.11:68765722::AA	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3959266906, ss4143831548, ss5268854277, ss5466459077, ss5716345101	NC_000006.12:68055830::AA	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
8105358899	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3717435917	NC_000006.12:68055831::AA	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss4143831549	NC_000006.12:68055830::AAA	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss4143831550	NC_000006.12:68055830::AAAAA	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
ss4143831551	NC_000006.12:68055830::AAAAAAAAAAA… NC_000006.12:68055830::AAAAAAAAAAAAA	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA	(self)
ss4143831552, ss5716345104	NC_000006.12:68055830::AAAAAAAAAAA… NC_000006.12:68055830::AAAAAAAAAAAAAA	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	(self)
ss4143831553	NC_000006.12:68055830::AAAAAAAAAAA… NC_000006.12:68055830::AAAAAAAAAAAAAAA	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	(self)
ss4143831554	NC_000006.12:68055830::AAAAAAAAAAA… NC_000006.12:68055830::AAAAAAAAAAAAAAAA	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss3500604416	NC_000006.12:68055830:AAAA:	NC_000006.12:68055830:AAAAAAAAAAAA… NC_000006.12:68055830:AAAAAAAAAAAAAAA:AAAAAAAAAAA

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs5877122

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs5877122