Name: rs60282843
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs60282843

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr7:155073831-155073841 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delCA / dupCA / dupCACA / dup(CA)₃…
delCA / dupCA / dupCACA / dup(CA)₃ / dup(CA)₄
Variation Type: Indel Insertion and Deletion
Frequency: (AC)₅A=0.1030 (516/5008, 1000G)
(AC)₅A=0.0697 (328/4706, ALFA)
(AC)₅A=0.00 (0/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: HTR5A : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	4706	ACACACACACA=0.0697	ACACACACA=0.0000, ACACACACACACA=0.0000, ACACACACACACACA=0.9256, ACACACACACACACACA=0.0047, ACACACACACACACACACA=0.0000	0.070326	0.929674	0.0	32
European	Sub	4370	ACACACACACA=0.0000	ACACACACA=0.0000, ACACACACACACA=0.0000, ACACACACACACACA=0.9950, ACACACACACACACACA=0.0050, ACACACACACACACACACA=0.0000	0.0	1.0	0.0	N/A
African	Sub	320	ACACACACACA=1.000	ACACACACA=0.000, ACACACACACACA=0.000, ACACACACACACACA=0.000, ACACACACACACACACA=0.000, ACACACACACACACACACA=0.000	1.0	0.0	0.0	N/A
African Others	Sub	14	ACACACACACA=1.00	ACACACACA=0.00, ACACACACACACA=0.00, ACACACACACACACA=0.00, ACACACACACACACACA=0.00, ACACACACACACACACACA=0.00	1.0	0.0	0.0	N/A
African American	Sub	306	ACACACACACA=1.000	ACACACACA=0.000, ACACACACACACA=0.000, ACACACACACACACA=0.000, ACACACACACACACACA=0.000, ACACACACACACACACACA=0.000	1.0	0.0	0.0	N/A
Asian	Sub	0	ACACACACACA=0	ACACACACA=0, ACACACACACACA=0, ACACACACACACACA=0, ACACACACACACACACA=0, ACACACACACACACACACA=0	0	0	0	N/A
East Asian	Sub	0	ACACACACACA=0	ACACACACA=0, ACACACACACACA=0, ACACACACACACACA=0, ACACACACACACACACA=0, ACACACACACACACACACA=0	0	0	0	N/A
Other Asian	Sub	0	ACACACACACA=0	ACACACACA=0, ACACACACACACA=0, ACACACACACACACA=0, ACACACACACACACACA=0, ACACACACACACACACACA=0	0	0	0	N/A
Latin American 1	Sub	0	ACACACACACA=0	ACACACACA=0, ACACACACACACA=0, ACACACACACACACA=0, ACACACACACACACACA=0, ACACACACACACACACACA=0	0	0	0	N/A
Latin American 2	Sub	0	ACACACACACA=0	ACACACACA=0, ACACACACACACA=0, ACACACACACACACA=0, ACACACACACACACACA=0, ACACACACACACACACACA=0	0	0	0	N/A
South Asian	Sub	0	ACACACACACA=0	ACACACACA=0, ACACACACACACA=0, ACACACACACACACA=0, ACACACACACACACACA=0, ACACACACACACACACACA=0	0	0	0	N/A
Other	Sub	16	ACACACACACA=0.50	ACACACACA=0.00, ACACACACACACA=0.00, ACACACACACACACA=0.50, ACACACACACACACACA=0.00, ACACACACACACACACACA=0.00	0.5	0.5	0.0	5

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
1000Genomes	Global	Study-wide	5008	- No frequency provided	dupCACA=0.8970
1000Genomes	African	Sub	1322	- No frequency provided	dupCACA=0.6475
1000Genomes	East Asian	Sub	1008	- No frequency provided	dupCACA=0.9940
1000Genomes	Europe	Sub	1006	- No frequency provided	dupCACA=0.9930
1000Genomes	South Asian	Sub	978	- No frequency provided	dupCACA=0.997
1000Genomes	American	Sub	694	- No frequency provided	dupCACA=0.951
Allele Frequency Aggregator	Total	Global	4706	(AC)₅A=0.0697	delCA=0.0000, dupCA=0.0000, dupCACA=0.9256, dup(CA)₃=0.0047, dup(CA)₄=0.0000
Allele Frequency Aggregator	European	Sub	4370	(AC)₅A=0.0000	delCA=0.0000, dupCA=0.0000, dupCACA=0.9950, dup(CA)₃=0.0050, dup(CA)₄=0.0000
Allele Frequency Aggregator	African	Sub	320	(AC)₅A=1.000	delCA=0.000, dupCA=0.000, dupCACA=0.000, dup(CA)₃=0.000, dup(CA)₄=0.000
Allele Frequency Aggregator	Other	Sub	16	(AC)₅A=0.50	delCA=0.00, dupCA=0.00, dupCACA=0.50, dup(CA)₃=0.00, dup(CA)₄=0.00
Allele Frequency Aggregator	Latin American 1	Sub	0	(AC)₅A=0	delCA=0, dupCA=0, dupCACA=0, dup(CA)₃=0, dup(CA)₄=0
Allele Frequency Aggregator	Latin American 2	Sub	0	(AC)₅A=0	delCA=0, dupCA=0, dupCACA=0, dup(CA)₃=0, dup(CA)₄=0
Allele Frequency Aggregator	South Asian	Sub	0	(AC)₅A=0	delCA=0, dupCA=0, dupCACA=0, dup(CA)₃=0, dup(CA)₄=0
Allele Frequency Aggregator	Asian	Sub	0	(AC)₅A=0	delCA=0, dupCA=0, dupCACA=0, dup(CA)₃=0, dup(CA)₄=0
The Danish reference pan genome	Danish	Study-wide	40	- No frequency provided	dupCACA=1.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 7	NC_000007.14:g.155073832CA[4]
GRCh38.p14 chr 7	NC_000007.14:g.155073832CA[6]
GRCh38.p14 chr 7	NC_000007.14:g.155073832CA[7]
GRCh38.p14 chr 7	NC_000007.14:g.155073832CA[8]
GRCh38.p14 chr 7	NC_000007.14:g.155073832CA[9]
GRCh37.p13 chr 7	NC_000007.13:g.154865542CA[4]
GRCh37.p13 chr 7	NC_000007.13:g.154865542CA[6]
GRCh37.p13 chr 7	NC_000007.13:g.154865542CA[7]
GRCh37.p13 chr 7	NC_000007.13:g.154865542CA[8]
GRCh37.p13 chr 7	NC_000007.13:g.154865542CA[9]
HTR5A RefSeqGene (LRG_1057)	NG_044997.1:g.8509CA[4]
HTR5A RefSeqGene (LRG_1057)	NG_044997.1:g.8509CA[6]
HTR5A RefSeqGene (LRG_1057)	NG_044997.1:g.8509CA[7]
HTR5A RefSeqGene (LRG_1057)	NG_044997.1:g.8509CA[8]
HTR5A RefSeqGene (LRG_1057)	NG_044997.1:g.8509CA[9]

Gene: HTR5A, 5-hydroxytryptamine receptor 5A (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
HTR5A transcript	NM_024012.4:c.741+2191AC[… NM_024012.4:c.741+2191AC[4]	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(AC)₅A=	delCA	dupCA	dupCACA	dup(CA)₃	dup(CA)₄
GRCh38.p14 chr 7	NC_000007.14:g.155073831_155073841=	NC_000007.14:g.155073832CA[4]	NC_000007.14:g.155073832CA[6]	NC_000007.14:g.155073832CA[7]	NC_000007.14:g.155073832CA[8]	NC_000007.14:g.155073832CA[9]
GRCh37.p13 chr 7	NC_000007.13:g.154865541_154865551=	NC_000007.13:g.154865542CA[4]	NC_000007.13:g.154865542CA[6]	NC_000007.13:g.154865542CA[7]	NC_000007.13:g.154865542CA[8]	NC_000007.13:g.154865542CA[9]
HTR5A RefSeqGene (LRG_1057)	NG_044997.1:g.8508_8518=	NG_044997.1:g.8509CA[4]	NG_044997.1:g.8509CA[6]	NG_044997.1:g.8509CA[7]	NG_044997.1:g.8509CA[8]	NG_044997.1:g.8509CA[9]
HTR5A transcript	NM_024012.3:c.741+2191=	NM_024012.3:c.741+2191AC[4]	NM_024012.3:c.741+2191AC[6]	NM_024012.3:c.741+2191AC[7]	NM_024012.3:c.741+2191AC[8]	NM_024012.3:c.741+2191AC[9]
HTR5A transcript	NM_024012.4:c.741+2191=	NM_024012.4:c.741+2191AC[4]	NM_024012.4:c.741+2191AC[6]	NM_024012.4:c.741+2191AC[7]	NM_024012.4:c.741+2191AC[8]	NM_024012.4:c.741+2191AC[9]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

60 SubSNP, 20 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HGSV	ss80379841	Dec 03, 2013 (142)
2	HGSV	ss81973827	Dec 04, 2013 (142)
3	HUMANGENOME_JCVI	ss95480512	Feb 06, 2009 (130)
4	GMI	ss288883129	May 04, 2012 (137)
5	1000GENOMES	ss327066258	May 09, 2011 (134)
6	1000GENOMES	ss327377070	May 09, 2011 (134)
7	LUNTER	ss551804696	Apr 25, 2013 (138)
8	LUNTER	ss552018982	Apr 25, 2013 (138)
9	LUNTER	ss553324857	Apr 25, 2013 (138)
10	BILGI_BIOE	ss666423400	Apr 25, 2013 (138)
11	1000GENOMES	ss1367798068	Aug 21, 2014 (142)
12	DDI	ss1536570755	Apr 01, 2015 (144)
13	EVA_GENOME_DK	ss1577122393	Apr 01, 2015 (144)
14	EVA_UK10K_ALSPAC	ss1705899597	Apr 01, 2015 (144)
15	EVA_UK10K_ALSPAC	ss1705899599	Apr 01, 2015 (144)
16	EVA_UK10K_TWINSUK	ss1705899694	Apr 01, 2015 (144)
17	EVA_UK10K_TWINSUK	ss1705899695	Apr 01, 2015 (144)
18	JJLAB	ss2030883174	Sep 14, 2016 (149)
19	SWEGEN	ss3002353483	Nov 08, 2017 (151)
20	SWEGEN	ss3002353484	Nov 08, 2017 (151)
21	SWEGEN	ss3002353485	Nov 08, 2017 (151)
22	MCHAISSO	ss3064282600	Nov 08, 2017 (151)
23	MCHAISSO	ss3064282601	Nov 08, 2017 (151)
24	MCHAISSO	ss3064282602	Nov 08, 2017 (151)
25	MCHAISSO	ss3065167309	Nov 08, 2017 (151)
26	BEROUKHIMLAB	ss3644252566	Oct 12, 2018 (152)
27	BIOINF_KMB_FNS_UNIBA	ss3646068970	Oct 12, 2018 (152)
28	URBANLAB	ss3648798574	Oct 12, 2018 (152)
29	EVA_DECODE	ss3721057963	Jul 13, 2019 (153)
30	EVA_DECODE	ss3721057964	Jul 13, 2019 (153)
31	ACPOP	ss3735231773	Jul 13, 2019 (153)
32	ACPOP	ss3735231774	Jul 13, 2019 (153)
33	PACBIO	ss3786011595	Jul 13, 2019 (153)
34	PACBIO	ss3791282454	Jul 13, 2019 (153)
35	PACBIO	ss3796162830	Jul 13, 2019 (153)
36	KHV_HUMAN_GENOMES	ss3810554472	Jul 13, 2019 (153)
37	EVA	ss3830913846	Apr 26, 2020 (154)
38	EVA	ss3838958491	Apr 26, 2020 (154)
39	EVA	ss3844416260	Apr 26, 2020 (154)
40	GNOMAD	ss4176303019	Apr 26, 2021 (155)
41	GNOMAD	ss4176303020	Apr 26, 2021 (155)
42	GNOMAD	ss4176303021	Apr 26, 2021 (155)
43	GNOMAD	ss4176303022	Apr 26, 2021 (155)
44	GNOMAD	ss4176303023	Apr 26, 2021 (155)
45	TOMMO_GENOMICS	ss5186436218	Apr 26, 2021 (155)
46	TOMMO_GENOMICS	ss5186436219	Apr 26, 2021 (155)
47	TOMMO_GENOMICS	ss5186436220	Apr 26, 2021 (155)
48	1000G_HIGH_COVERAGE	ss5275405785	Oct 17, 2022 (156)
49	1000G_HIGH_COVERAGE	ss5275405786	Oct 17, 2022 (156)
50	1000G_HIGH_COVERAGE	ss5275405787	Oct 17, 2022 (156)
51	HUGCELL_USP	ss5472197155	Oct 17, 2022 (156)
52	HUGCELL_USP	ss5472197156	Oct 17, 2022 (156)
53	TOMMO_GENOMICS	ss5727700281	Oct 17, 2022 (156)
54	TOMMO_GENOMICS	ss5727700282	Oct 17, 2022 (156)
55	TOMMO_GENOMICS	ss5727700283	Oct 17, 2022 (156)
56	YY_MCH	ss5809263678	Oct 17, 2022 (156)
57	EVA	ss5823783209	Oct 17, 2022 (156)
58	EVA	ss5823783210	Oct 17, 2022 (156)
59	EVA	ss5856171057	Oct 17, 2022 (156)
60	EVA	ss5861612070	Oct 17, 2022 (156)
61	1000Genomes	NC_000007.13 - 154865541	Oct 12, 2018 (152)
62	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 22220047 (NC_000007.13:154865540::ACAC 3823/3854) Row 22220048 (NC_000007.13:154865540::AC 26/3854)	-	Oct 12, 2018 (152)
63	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 22220047 (NC_000007.13:154865540::ACAC 3823/3854) Row 22220048 (NC_000007.13:154865540::AC 26/3854)	-	Oct 12, 2018 (152)
64	The Danish reference pan genome	NC_000007.13 - 154865541	Apr 26, 2020 (154)
65	gnomAD - Genomes Submission ignored due to conflicting rows: Row 281977353 (NC_000007.14:155073830::AC 19/124606) Row 281977354 (NC_000007.14:155073830::ACAC 111243/124496) Row 281977355 (NC_000007.14:155073830::ACACAC 1754/124630)...	-	Apr 26, 2021 (155)
66	gnomAD - Genomes Submission ignored due to conflicting rows: Row 281977353 (NC_000007.14:155073830::AC 19/124606) Row 281977354 (NC_000007.14:155073830::ACAC 111243/124496) Row 281977355 (NC_000007.14:155073830::ACACAC 1754/124630)...	-	Apr 26, 2021 (155)
67	gnomAD - Genomes Submission ignored due to conflicting rows: Row 281977353 (NC_000007.14:155073830::AC 19/124606) Row 281977354 (NC_000007.14:155073830::ACAC 111243/124496) Row 281977355 (NC_000007.14:155073830::ACACAC 1754/124630)...	-	Apr 26, 2021 (155)
68	gnomAD - Genomes Submission ignored due to conflicting rows: Row 281977353 (NC_000007.14:155073830::AC 19/124606) Row 281977354 (NC_000007.14:155073830::ACAC 111243/124496) Row 281977355 (NC_000007.14:155073830::ACACAC 1754/124630)...	-	Apr 26, 2021 (155)
69	gnomAD - Genomes Submission ignored due to conflicting rows: Row 281977353 (NC_000007.14:155073830::AC 19/124606) Row 281977354 (NC_000007.14:155073830::ACAC 111243/124496) Row 281977355 (NC_000007.14:155073830::ACACAC 1754/124630)...	-	Apr 26, 2021 (155)
70	Northern Sweden Submission ignored due to conflicting rows: Row 8516638 (NC_000007.13:154865540::ACAC 592/598) Row 8516639 (NC_000007.13:154865540::ACACAC 4/598)	-	Jul 13, 2019 (153)
71	Northern Sweden Submission ignored due to conflicting rows: Row 8516638 (NC_000007.13:154865540::ACAC 592/598) Row 8516639 (NC_000007.13:154865540::ACACAC 4/598)	-	Jul 13, 2019 (153)
72	8.3KJPN Submission ignored due to conflicting rows: Row 44405525 (NC_000007.13:154865540::ACAC 16722/16734) Row 44405526 (NC_000007.13:154865540::AC 4/16734) Row 44405527 (NC_000007.13:154865540::ACACAC 5/16734)	-	Apr 26, 2021 (155)
73	8.3KJPN Submission ignored due to conflicting rows: Row 44405525 (NC_000007.13:154865540::ACAC 16722/16734) Row 44405526 (NC_000007.13:154865540::AC 4/16734) Row 44405527 (NC_000007.13:154865540::ACACAC 5/16734)	-	Apr 26, 2021 (155)
74	8.3KJPN Submission ignored due to conflicting rows: Row 44405525 (NC_000007.13:154865540::ACAC 16722/16734) Row 44405526 (NC_000007.13:154865540::AC 4/16734) Row 44405527 (NC_000007.13:154865540::ACACAC 5/16734)	-	Apr 26, 2021 (155)
75	14KJPN Submission ignored due to conflicting rows: Row 61537385 (NC_000007.14:155073830::ACAC 28189/28240) Row 61537386 (NC_000007.14:155073830::AC 7/28240) Row 61537387 (NC_000007.14:155073830::ACACAC 6/28240)	-	Oct 17, 2022 (156)
76	14KJPN Submission ignored due to conflicting rows: Row 61537385 (NC_000007.14:155073830::ACAC 28189/28240) Row 61537386 (NC_000007.14:155073830::AC 7/28240) Row 61537387 (NC_000007.14:155073830::ACACAC 6/28240)	-	Oct 17, 2022 (156)
77	14KJPN Submission ignored due to conflicting rows: Row 61537385 (NC_000007.14:155073830::ACAC 28189/28240) Row 61537386 (NC_000007.14:155073830::AC 7/28240) Row 61537387 (NC_000007.14:155073830::ACACAC 6/28240)	-	Oct 17, 2022 (156)
78	UK 10K study - Twins Submission ignored due to conflicting rows: Row 22220047 (NC_000007.13:154865540::ACAC 3677/3708) Row 22220048 (NC_000007.13:154865540::AC 20/3708)	-	Oct 12, 2018 (152)
79	UK 10K study - Twins Submission ignored due to conflicting rows: Row 22220047 (NC_000007.13:154865540::ACAC 3677/3708) Row 22220048 (NC_000007.13:154865540::AC 20/3708)	-	Oct 12, 2018 (152)
80	ALFA	NC_000007.14 - 155073831	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs397781967	Aug 21, 2014 (142)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4176303023	NC_000007.14:155073830:AC:	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACA	(self)
12425583767	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACA	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACA	(self)
ss1705899599, ss1705899695, ss3002353484, ss5186436219, ss5823783210	NC_000007.13:154865540::AC	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACA	(self)
ss3721057964, ss4176303019, ss5727700282	NC_000007.14:155073830::AC	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACA	(self)
12425583767	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACA	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACA	(self)
ss327066258, ss327377070, ss551804696, ss552018982, ss553324857	NC_000007.12:154496473::ACAC	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACACA	(self)
ss288883129	NC_000007.12:154496484::CACA	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACACA	(self)
39939422, 1195240, ss666423400, ss1367798068, ss1536570755, ss1577122393, ss1705899597, ss1705899694, ss2030883174, ss3002353483, ss3644252566, ss3735231773, ss3786011595, ss3791282454, ss3796162830, ss3830913846, ss3838958491, ss5186436218, ss5823783209	NC_000007.13:154865540::ACAC	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACACA	(self)
ss3064282600, ss3064282601, ss3064282602, ss3065167309, ss3646068970, ss3648798574, ss3721057963, ss3810554472, ss3844416260, ss4176303020, ss5275405785, ss5472197155, ss5727700281, ss5809263678, ss5856171057, ss5861612070	NC_000007.14:155073830::ACAC	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACACA	(self)
12425583767	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACACA	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACACA	(self)
ss80379841, ss81973827, ss95480512	NT_007741.14:494917::CACA	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACACA	(self)
ss3002353485, ss3735231774, ss5186436220	NC_000007.13:154865540::ACACAC	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACACACA	(self)
ss4176303021, ss5275405786, ss5472197156, ss5727700283	NC_000007.14:155073830::ACACAC	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACACACA	(self)
12425583767	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACACACA	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACACACA	(self)
ss4176303022, ss5275405787	NC_000007.14:155073830::ACACACAC	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACACACACA	(self)
12425583767	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACACACACA	NC_000007.14:155073830:ACACACACACA… NC_000007.14:155073830:ACACACACACA:ACACACACACACACACACA	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs60282843

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs60282843