Name: rs71355710
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs71355710

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr17:51108387-51108404 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(A)₅ / del(A)₄ / delAAA / delAA…
del(A)₅ / del(A)₄ / delAAA / delAA / delA / dupA / dupAA / dupAAA / dup(A)₁₇
Variation Type: Indel Insertion and Deletion
Frequency: delAAA=0.2214 (1109/5008, 1000G)
del(A)₅=0.0000 (0/2570, ALFA)
del(A)₄=0.0000 (0/2570, ALFA) (+ 5 more)
delAAA=0.0000 (0/2570, ALFA)
delAA=0.0000 (0/2570, ALFA)
delA=0.0000 (0/2570, ALFA)
dupA=0.0000 (0/2570, ALFA)
dupAA=0.0000 (0/2570, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SPAG9 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HWEP
Total	Global	2570	AAAAAAAAAAAAAAAAAA=1.0000	AAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
European	Sub	1472	AAAAAAAAAAAAAAAAAA=1.0000	AAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
African	Sub	826	AAAAAAAAAAAAAAAAAA=1.000	AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A
African Others	Sub	28	AAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
African American	Sub	798	AAAAAAAAAAAAAAAAAA=1.000	AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A
Asian	Sub	22	AAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
East Asian	Sub	20	AAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Other Asian	Sub	2	AAAAAAAAAAAAAAAAAA=1.0	AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAA=0.0	1.0	N/A
Latin American 1	Sub	32	AAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Latin American 2	Sub	92	AAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
South Asian	Sub	24	AAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Other	Sub	102	AAAAAAAAAAAAAAAAAA=1.000	AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
1000Genomes	Global	Study-wide	5008	(A)₁₈=0.7786	delAAA=0.2214
1000Genomes	African	Sub	1322	(A)₁₈=0.9206	delAAA=0.0794
1000Genomes	East Asian	Sub	1008	(A)₁₈=0.7718	delAAA=0.2282
1000Genomes	Europe	Sub	1006	(A)₁₈=0.7038	delAAA=0.2962
1000Genomes	South Asian	Sub	978	(A)₁₈=0.756	delAAA=0.244
1000Genomes	American	Sub	694	(A)₁₈=0.659	delAAA=0.341
Allele Frequency Aggregator	Total	Global	2570	(A)₁₈=1.0000	del(A)₅=0.0000, del(A)₄=0.0000, delAAA=0.0000, delAA=0.0000, delA=0.0000, dupA=0.0000, dupAA=0.0000
Allele Frequency Aggregator	European	Sub	1472	(A)₁₈=1.0000	del(A)₅=0.0000, del(A)₄=0.0000, delAAA=0.0000, delAA=0.0000, delA=0.0000, dupA=0.0000, dupAA=0.0000
Allele Frequency Aggregator	African	Sub	826	(A)₁₈=1.000	del(A)₅=0.000, del(A)₄=0.000, delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000
Allele Frequency Aggregator	Other	Sub	102	(A)₁₈=1.000	del(A)₅=0.000, del(A)₄=0.000, delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000
Allele Frequency Aggregator	Latin American 2	Sub	92	(A)₁₈=1.00	del(A)₅=0.00, del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	Latin American 1	Sub	32	(A)₁₈=1.00	del(A)₅=0.00, del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	South Asian	Sub	24	(A)₁₈=1.00	del(A)₅=0.00, del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	Asian	Sub	22	(A)₁₈=1.00	del(A)₅=0.00, del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 17	NC_000017.11:g.51108400_51108404del
GRCh38.p14 chr 17	NC_000017.11:g.51108401_51108404del
GRCh38.p14 chr 17	NC_000017.11:g.51108402_51108404del
GRCh38.p14 chr 17	NC_000017.11:g.51108403_51108404del
GRCh38.p14 chr 17	NC_000017.11:g.51108404del
GRCh38.p14 chr 17	NC_000017.11:g.51108404dup
GRCh38.p14 chr 17	NC_000017.11:g.51108403_51108404dup
GRCh38.p14 chr 17	NC_000017.11:g.51108402_51108404dup
GRCh38.p14 chr 17	NC_000017.11:g.51108388_51108404dup
GRCh37.p13 chr 17	NC_000017.10:g.49185761_49185765del
GRCh37.p13 chr 17	NC_000017.10:g.49185762_49185765del
GRCh37.p13 chr 17	NC_000017.10:g.49185763_49185765del
GRCh37.p13 chr 17	NC_000017.10:g.49185764_49185765del
GRCh37.p13 chr 17	NC_000017.10:g.49185765del
GRCh37.p13 chr 17	NC_000017.10:g.49185765dup
GRCh37.p13 chr 17	NC_000017.10:g.49185764_49185765dup
GRCh37.p13 chr 17	NC_000017.10:g.49185763_49185765dup
GRCh37.p13 chr 17	NC_000017.10:g.49185749_49185765dup
SPAG9 RefSeqGene	NG_029710.1:g.17475_17479del
SPAG9 RefSeqGene	NG_029710.1:g.17476_17479del
SPAG9 RefSeqGene	NG_029710.1:g.17477_17479del
SPAG9 RefSeqGene	NG_029710.1:g.17478_17479del
SPAG9 RefSeqGene	NG_029710.1:g.17479del
SPAG9 RefSeqGene	NG_029710.1:g.17479dup
SPAG9 RefSeqGene	NG_029710.1:g.17478_17479dup
SPAG9 RefSeqGene	NG_029710.1:g.17477_17479dup
SPAG9 RefSeqGene	NG_029710.1:g.17463_17479dup

Gene: SPAG9, sperm associated antigen 9 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SPAG9 transcript variant 2	NM_001130527.3:c.303+1196… NM_001130527.3:c.303+11963_303+11967del	N/A	Intron Variant
SPAG9 transcript variant 1	NM_001130528.3:c.303+1196… NM_001130528.3:c.303+11963_303+11967del	N/A	Intron Variant
SPAG9 transcript variant 3	NM_003971.6:c.303+11963_3… NM_003971.6:c.303+11963_303+11967del	N/A	Intron Variant
SPAG9 transcript variant 4	NM_001251971.2:c.	N/A	Genic Upstream Transcript Variant
SPAG9 transcript variant X1	XM_005257768.3:c.303+1196… XM_005257768.3:c.303+11963_303+11967del	N/A	Intron Variant
SPAG9 transcript variant X2	XM_005257771.4:c.303+1196… XM_005257771.4:c.303+11963_303+11967del	N/A	Intron Variant
SPAG9 transcript variant X5	XM_005257774.5:c.	N/A	Genic Upstream Transcript Variant
SPAG9 transcript variant X3	XM_017025283.3:c.	N/A	Genic Upstream Transcript Variant
SPAG9 transcript variant X4	XM_017025284.3:c.	N/A	Genic Upstream Transcript Variant
SPAG9 transcript variant X6	XM_017025285.3:c.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(A)₁₈=	del(A)₅	del(A)₄	delAAA	delAA	delA	dupA	dupAA	dupAAA	dup(A)₁₇
GRCh38.p14 chr 17	NC_000017.11:g.51108387_51108404=	NC_000017.11:g.51108400_51108404del	NC_000017.11:g.51108401_51108404del	NC_000017.11:g.51108402_51108404del	NC_000017.11:g.51108403_51108404del	NC_000017.11:g.51108404del	NC_000017.11:g.51108404dup	NC_000017.11:g.51108403_51108404dup	NC_000017.11:g.51108402_51108404dup	NC_000017.11:g.51108388_51108404dup
GRCh37.p13 chr 17	NC_000017.10:g.49185748_49185765=	NC_000017.10:g.49185761_49185765del	NC_000017.10:g.49185762_49185765del	NC_000017.10:g.49185763_49185765del	NC_000017.10:g.49185764_49185765del	NC_000017.10:g.49185765del	NC_000017.10:g.49185765dup	NC_000017.10:g.49185764_49185765dup	NC_000017.10:g.49185763_49185765dup	NC_000017.10:g.49185749_49185765dup
SPAG9 RefSeqGene	NG_029710.1:g.17462_17479=	NG_029710.1:g.17475_17479del	NG_029710.1:g.17476_17479del	NG_029710.1:g.17477_17479del	NG_029710.1:g.17478_17479del	NG_029710.1:g.17479del	NG_029710.1:g.17479dup	NG_029710.1:g.17478_17479dup	NG_029710.1:g.17477_17479dup	NG_029710.1:g.17463_17479dup
SPAG9 transcript variant 2	NM_001130527.2:c.303+11967=	NM_001130527.2:c.303+11963_303+11967del	NM_001130527.2:c.303+11964_303+11967del	NM_001130527.2:c.303+11965_303+11967del	NM_001130527.2:c.303+11966_303+11967del	NM_001130527.2:c.303+11967del	NM_001130527.2:c.303+11967dup	NM_001130527.2:c.303+11966_303+11967dup	NM_001130527.2:c.303+11965_303+11967dup	NM_001130527.2:c.303+11951_303+11967dup
SPAG9 transcript variant 2	NM_001130527.3:c.303+11967=	NM_001130527.3:c.303+11963_303+11967del	NM_001130527.3:c.303+11964_303+11967del	NM_001130527.3:c.303+11965_303+11967del	NM_001130527.3:c.303+11966_303+11967del	NM_001130527.3:c.303+11967del	NM_001130527.3:c.303+11967dup	NM_001130527.3:c.303+11966_303+11967dup	NM_001130527.3:c.303+11965_303+11967dup	NM_001130527.3:c.303+11951_303+11967dup
SPAG9 transcript variant 1	NM_001130528.2:c.303+11967=	NM_001130528.2:c.303+11963_303+11967del	NM_001130528.2:c.303+11964_303+11967del	NM_001130528.2:c.303+11965_303+11967del	NM_001130528.2:c.303+11966_303+11967del	NM_001130528.2:c.303+11967del	NM_001130528.2:c.303+11967dup	NM_001130528.2:c.303+11966_303+11967dup	NM_001130528.2:c.303+11965_303+11967dup	NM_001130528.2:c.303+11951_303+11967dup
SPAG9 transcript variant 1	NM_001130528.3:c.303+11967=	NM_001130528.3:c.303+11963_303+11967del	NM_001130528.3:c.303+11964_303+11967del	NM_001130528.3:c.303+11965_303+11967del	NM_001130528.3:c.303+11966_303+11967del	NM_001130528.3:c.303+11967del	NM_001130528.3:c.303+11967dup	NM_001130528.3:c.303+11966_303+11967dup	NM_001130528.3:c.303+11965_303+11967dup	NM_001130528.3:c.303+11951_303+11967dup
SPAG9 transcript variant 3	NM_003971.5:c.303+11967=	NM_003971.5:c.303+11963_303+11967del	NM_003971.5:c.303+11964_303+11967del	NM_003971.5:c.303+11965_303+11967del	NM_003971.5:c.303+11966_303+11967del	NM_003971.5:c.303+11967del	NM_003971.5:c.303+11967dup	NM_003971.5:c.303+11966_303+11967dup	NM_003971.5:c.303+11965_303+11967dup	NM_003971.5:c.303+11951_303+11967dup
SPAG9 transcript variant 3	NM_003971.6:c.303+11967=	NM_003971.6:c.303+11963_303+11967del	NM_003971.6:c.303+11964_303+11967del	NM_003971.6:c.303+11965_303+11967del	NM_003971.6:c.303+11966_303+11967del	NM_003971.6:c.303+11967del	NM_003971.6:c.303+11967dup	NM_003971.6:c.303+11966_303+11967dup	NM_003971.6:c.303+11965_303+11967dup	NM_003971.6:c.303+11951_303+11967dup
SPAG9 transcript variant X1	XM_005257767.1:c.303+11967=	XM_005257767.1:c.303+11963_303+11967del	XM_005257767.1:c.303+11964_303+11967del	XM_005257767.1:c.303+11965_303+11967del	XM_005257767.1:c.303+11966_303+11967del	XM_005257767.1:c.303+11967del	XM_005257767.1:c.303+11967dup	XM_005257767.1:c.303+11966_303+11967dup	XM_005257767.1:c.303+11965_303+11967dup	XM_005257767.1:c.303+11951_303+11967dup
SPAG9 transcript variant X2	XM_005257768.1:c.303+11967=	XM_005257768.1:c.303+11963_303+11967del	XM_005257768.1:c.303+11964_303+11967del	XM_005257768.1:c.303+11965_303+11967del	XM_005257768.1:c.303+11966_303+11967del	XM_005257768.1:c.303+11967del	XM_005257768.1:c.303+11967dup	XM_005257768.1:c.303+11966_303+11967dup	XM_005257768.1:c.303+11965_303+11967dup	XM_005257768.1:c.303+11951_303+11967dup
SPAG9 transcript variant X1	XM_005257768.3:c.303+11967=	XM_005257768.3:c.303+11963_303+11967del	XM_005257768.3:c.303+11964_303+11967del	XM_005257768.3:c.303+11965_303+11967del	XM_005257768.3:c.303+11966_303+11967del	XM_005257768.3:c.303+11967del	XM_005257768.3:c.303+11967dup	XM_005257768.3:c.303+11966_303+11967dup	XM_005257768.3:c.303+11965_303+11967dup	XM_005257768.3:c.303+11951_303+11967dup
SPAG9 transcript variant X3	XM_005257769.1:c.303+11967=	XM_005257769.1:c.303+11963_303+11967del	XM_005257769.1:c.303+11964_303+11967del	XM_005257769.1:c.303+11965_303+11967del	XM_005257769.1:c.303+11966_303+11967del	XM_005257769.1:c.303+11967del	XM_005257769.1:c.303+11967dup	XM_005257769.1:c.303+11966_303+11967dup	XM_005257769.1:c.303+11965_303+11967dup	XM_005257769.1:c.303+11951_303+11967dup
SPAG9 transcript variant X4	XM_005257770.1:c.303+11967=	XM_005257770.1:c.303+11963_303+11967del	XM_005257770.1:c.303+11964_303+11967del	XM_005257770.1:c.303+11965_303+11967del	XM_005257770.1:c.303+11966_303+11967del	XM_005257770.1:c.303+11967del	XM_005257770.1:c.303+11967dup	XM_005257770.1:c.303+11966_303+11967dup	XM_005257770.1:c.303+11965_303+11967dup	XM_005257770.1:c.303+11951_303+11967dup
SPAG9 transcript variant X5	XM_005257771.1:c.303+11967=	XM_005257771.1:c.303+11963_303+11967del	XM_005257771.1:c.303+11964_303+11967del	XM_005257771.1:c.303+11965_303+11967del	XM_005257771.1:c.303+11966_303+11967del	XM_005257771.1:c.303+11967del	XM_005257771.1:c.303+11967dup	XM_005257771.1:c.303+11966_303+11967dup	XM_005257771.1:c.303+11965_303+11967dup	XM_005257771.1:c.303+11951_303+11967dup
SPAG9 transcript variant X2	XM_005257771.4:c.303+11967=	XM_005257771.4:c.303+11963_303+11967del	XM_005257771.4:c.303+11964_303+11967del	XM_005257771.4:c.303+11965_303+11967del	XM_005257771.4:c.303+11966_303+11967del	XM_005257771.4:c.303+11967del	XM_005257771.4:c.303+11967dup	XM_005257771.4:c.303+11966_303+11967dup	XM_005257771.4:c.303+11965_303+11967dup	XM_005257771.4:c.303+11951_303+11967dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

56 SubSNP, 26 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HUMANGENOME_JCVI	ss96568913	Feb 13, 2009 (130)
2	SSMP	ss664362138	Apr 01, 2015 (144)
3	SSIP	ss947370652	Aug 21, 2014 (142)
4	1000GENOMES	ss1376716747	Aug 21, 2014 (142)
5	EVA_UK10K_ALSPAC	ss1708781864	Apr 01, 2015 (144)
6	EVA_UK10K_TWINSUK	ss1708781885	Apr 01, 2015 (144)
7	EVA_UK10K_ALSPAC	ss1710734818	Apr 01, 2015 (144)
8	EVA_UK10K_TWINSUK	ss1710734825	Apr 01, 2015 (144)
9	SYSTEMSBIOZJU	ss2629039748	Nov 08, 2017 (151)
10	SWEGEN	ss3015633093	Nov 08, 2017 (151)
11	MCHAISSO	ss3064713977	Nov 08, 2017 (151)
12	EVA_DECODE	ss3700581275	Jul 13, 2019 (153)
13	EVA_DECODE	ss3700581276	Jul 13, 2019 (153)
14	EVA_DECODE	ss3700581277	Jul 13, 2019 (153)
15	EVA_DECODE	ss3700581278	Jul 13, 2019 (153)
16	EVA_DECODE	ss3700581279	Jul 13, 2019 (153)
17	ACPOP	ss3742074820	Jul 13, 2019 (153)
18	ACPOP	ss3742074821	Jul 13, 2019 (153)
19	ACPOP	ss3742074822	Jul 13, 2019 (153)
20	INMEGENXS	ss3745621353	Jul 13, 2019 (153)
21	KHV_HUMAN_GENOMES	ss3820000074	Jul 13, 2019 (153)
22	EVA	ss3834896166	Apr 27, 2020 (154)
23	EVA	ss3846557354	Apr 27, 2020 (154)
24	GNOMAD	ss4312640728	Apr 27, 2021 (155)
25	GNOMAD	ss4312640729	Apr 27, 2021 (155)
26	GNOMAD	ss4312640730	Apr 27, 2021 (155)
27	GNOMAD	ss4312640731	Apr 27, 2021 (155)
28	GNOMAD	ss4312640732	Apr 27, 2021 (155)
29	GNOMAD	ss4312640733	Apr 27, 2021 (155)
30	GNOMAD	ss4312640734	Apr 27, 2021 (155)
31	GNOMAD	ss4312640735	Apr 27, 2021 (155)
32	GNOMAD	ss4312640736	Apr 27, 2021 (155)
33	TOMMO_GENOMICS	ss5222701440	Apr 27, 2021 (155)
34	TOMMO_GENOMICS	ss5222701441	Apr 27, 2021 (155)
35	TOMMO_GENOMICS	ss5222701442	Apr 27, 2021 (155)
36	TOMMO_GENOMICS	ss5222701443	Apr 27, 2021 (155)
37	1000G_HIGH_COVERAGE	ss5303335616	Oct 16, 2022 (156)
38	1000G_HIGH_COVERAGE	ss5303335617	Oct 16, 2022 (156)
39	1000G_HIGH_COVERAGE	ss5303335618	Oct 16, 2022 (156)
40	1000G_HIGH_COVERAGE	ss5303335619	Oct 16, 2022 (156)
41	1000G_HIGH_COVERAGE	ss5303335620	Oct 16, 2022 (156)
42	1000G_HIGH_COVERAGE	ss5303335621	Oct 16, 2022 (156)
43	HUGCELL_USP	ss5496362149	Oct 16, 2022 (156)
44	HUGCELL_USP	ss5496362150	Oct 16, 2022 (156)
45	HUGCELL_USP	ss5496362151	Oct 16, 2022 (156)
46	HUGCELL_USP	ss5496362152	Oct 16, 2022 (156)
47	HUGCELL_USP	ss5496362153	Oct 16, 2022 (156)
48	TOMMO_GENOMICS	ss5779003774	Oct 16, 2022 (156)
49	TOMMO_GENOMICS	ss5779003775	Oct 16, 2022 (156)
50	TOMMO_GENOMICS	ss5779003776	Oct 16, 2022 (156)
51	TOMMO_GENOMICS	ss5779003778	Oct 16, 2022 (156)
52	EVA	ss5834062338	Oct 16, 2022 (156)
53	EVA	ss5834062339	Oct 16, 2022 (156)
54	EVA	ss5851828398	Oct 16, 2022 (156)
55	EVA	ss5914154177	Oct 16, 2022 (156)
56	EVA	ss5980972404	Oct 16, 2022 (156)
57	1000Genomes	NC_000017.10 - 49185748	Oct 12, 2018 (152)
58	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 39967582 (NC_000017.10:49185748:AA: 1946/3854) Row 39967583 (NC_000017.10:49185747:AAAA: 300/3854)	-	Oct 12, 2018 (152)
59	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 39967582 (NC_000017.10:49185748:AA: 1946/3854) Row 39967583 (NC_000017.10:49185747:AAAA: 300/3854)	-	Oct 12, 2018 (152)
60	gnomAD - Genomes Submission ignored due to conflicting rows: Row 508949745 (NC_000017.11:51108386::A 7942/109510) Row 508949746 (NC_000017.11:51108386::AA 32/109634) Row 508949747 (NC_000017.11:51108386::AAA 1/109648)...	-	Apr 27, 2021 (155)
61	gnomAD - Genomes Submission ignored due to conflicting rows: Row 508949745 (NC_000017.11:51108386::A 7942/109510) Row 508949746 (NC_000017.11:51108386::AA 32/109634) Row 508949747 (NC_000017.11:51108386::AAA 1/109648)...	-	Apr 27, 2021 (155)
62	gnomAD - Genomes Submission ignored due to conflicting rows: Row 508949745 (NC_000017.11:51108386::A 7942/109510) Row 508949746 (NC_000017.11:51108386::AA 32/109634) Row 508949747 (NC_000017.11:51108386::AAA 1/109648)...	-	Apr 27, 2021 (155)
63	gnomAD - Genomes Submission ignored due to conflicting rows: Row 508949745 (NC_000017.11:51108386::A 7942/109510) Row 508949746 (NC_000017.11:51108386::AA 32/109634) Row 508949747 (NC_000017.11:51108386::AAA 1/109648)...	-	Apr 27, 2021 (155)
64	gnomAD - Genomes Submission ignored due to conflicting rows: Row 508949745 (NC_000017.11:51108386::A 7942/109510) Row 508949746 (NC_000017.11:51108386::AA 32/109634) Row 508949747 (NC_000017.11:51108386::AAA 1/109648)...	-	Apr 27, 2021 (155)
65	gnomAD - Genomes Submission ignored due to conflicting rows: Row 508949745 (NC_000017.11:51108386::A 7942/109510) Row 508949746 (NC_000017.11:51108386::AA 32/109634) Row 508949747 (NC_000017.11:51108386::AAA 1/109648)...	-	Apr 27, 2021 (155)
66	gnomAD - Genomes Submission ignored due to conflicting rows: Row 508949745 (NC_000017.11:51108386::A 7942/109510) Row 508949746 (NC_000017.11:51108386::AA 32/109634) Row 508949747 (NC_000017.11:51108386::AAA 1/109648)...	-	Apr 27, 2021 (155)
67	gnomAD - Genomes Submission ignored due to conflicting rows: Row 508949745 (NC_000017.11:51108386::A 7942/109510) Row 508949746 (NC_000017.11:51108386::AA 32/109634) Row 508949747 (NC_000017.11:51108386::AAA 1/109648)...	-	Apr 27, 2021 (155)
68	gnomAD - Genomes Submission ignored due to conflicting rows: Row 508949745 (NC_000017.11:51108386::A 7942/109510) Row 508949746 (NC_000017.11:51108386::AA 32/109634) Row 508949747 (NC_000017.11:51108386::AAA 1/109648)...	-	Apr 27, 2021 (155)
69	Northern Sweden Submission ignored due to conflicting rows: Row 15359685 (NC_000017.10:49185747:A: 126/512) Row 15359686 (NC_000017.10:49185747:AAA: 143/512) Row 15359687 (NC_000017.10:49185747:AAAA: 6/512)	-	Jul 13, 2019 (153)
70	Northern Sweden Submission ignored due to conflicting rows: Row 15359685 (NC_000017.10:49185747:A: 126/512) Row 15359686 (NC_000017.10:49185747:AAA: 143/512) Row 15359687 (NC_000017.10:49185747:AAAA: 6/512)	-	Jul 13, 2019 (153)
71	Northern Sweden Submission ignored due to conflicting rows: Row 15359685 (NC_000017.10:49185747:A: 126/512) Row 15359686 (NC_000017.10:49185747:AAA: 143/512) Row 15359687 (NC_000017.10:49185747:AAAA: 6/512)	-	Jul 13, 2019 (153)
72	8.3KJPN Submission ignored due to conflicting rows: Row 80670747 (NC_000017.10:49185747:AAA: 2775/16722) Row 80670748 (NC_000017.10:49185747::A 3599/16722) Row 80670749 (NC_000017.10:49185747:A: 790/16722)...	-	Apr 27, 2021 (155)
73	8.3KJPN Submission ignored due to conflicting rows: Row 80670747 (NC_000017.10:49185747:AAA: 2775/16722) Row 80670748 (NC_000017.10:49185747::A 3599/16722) Row 80670749 (NC_000017.10:49185747:A: 790/16722)...	-	Apr 27, 2021 (155)
74	8.3KJPN Submission ignored due to conflicting rows: Row 80670747 (NC_000017.10:49185747:AAA: 2775/16722) Row 80670748 (NC_000017.10:49185747::A 3599/16722) Row 80670749 (NC_000017.10:49185747:A: 790/16722)...	-	Apr 27, 2021 (155)
75	8.3KJPN Submission ignored due to conflicting rows: Row 80670747 (NC_000017.10:49185747:AAA: 2775/16722) Row 80670748 (NC_000017.10:49185747::A 3599/16722) Row 80670749 (NC_000017.10:49185747:A: 790/16722)...	-	Apr 27, 2021 (155)
76	14KJPN Submission ignored due to conflicting rows: Row 112840878 (NC_000017.11:51108386:AAA: 4603/28254) Row 112840879 (NC_000017.11:51108386::A 6132/28254) Row 112840880 (NC_000017.11:51108386:A: 1383/28254)...	-	Oct 16, 2022 (156)
77	14KJPN Submission ignored due to conflicting rows: Row 112840878 (NC_000017.11:51108386:AAA: 4603/28254) Row 112840879 (NC_000017.11:51108386::A 6132/28254) Row 112840880 (NC_000017.11:51108386:A: 1383/28254)...	-	Oct 16, 2022 (156)
78	14KJPN Submission ignored due to conflicting rows: Row 112840878 (NC_000017.11:51108386:AAA: 4603/28254) Row 112840879 (NC_000017.11:51108386::A 6132/28254) Row 112840880 (NC_000017.11:51108386:A: 1383/28254)...	-	Oct 16, 2022 (156)
79	14KJPN Submission ignored due to conflicting rows: Row 112840878 (NC_000017.11:51108386:AAA: 4603/28254) Row 112840879 (NC_000017.11:51108386::A 6132/28254) Row 112840880 (NC_000017.11:51108386:A: 1383/28254)...	-	Oct 16, 2022 (156)
80	UK 10K study - Twins Submission ignored due to conflicting rows: Row 39967582 (NC_000017.10:49185748:AA: 1836/3708) Row 39967583 (NC_000017.10:49185747:AAAA: 266/3708)	-	Oct 12, 2018 (152)
81	UK 10K study - Twins Submission ignored due to conflicting rows: Row 39967582 (NC_000017.10:49185748:AA: 1836/3708) Row 39967583 (NC_000017.10:49185747:AAAA: 266/3708)	-	Oct 12, 2018 (152)
82	ALFA	NC_000017.11 - 51108387	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss3015633093	NC_000017.10:49185747:AAAAA:	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss4312640736	NC_000017.11:51108386:AAAAA:	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
10429942338	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss1708781864, ss1708781885, ss3742074822, ss5834062339	NC_000017.10:49185747:AAAA:	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3064713977, ss3700581279, ss4312640735, ss5303335620, ss5496362153	NC_000017.11:51108386:AAAA:	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
10429942338	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
72125052, ss664362138, ss947370652, ss1376716747, ss2629039748, ss3742074821, ss3745621353, ss5222701440, ss5834062338	NC_000017.10:49185747:AAA:	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss1710734818, ss1710734825	NC_000017.10:49185748:AAA:	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss3820000074, ss4312640734, ss5303335616, ss5496362151, ss5779003774, ss5851828398, ss5914154177	NC_000017.11:51108386:AAA:	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
10429942338	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss3700581278	NC_000017.11:51108387:AAA:	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss96568913	NT_010783.15:14459899:AAA:	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss5980972404	NC_000017.10:49185747:AA:	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA
	NC_000017.10:49185748:AA:	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss4312640733, ss5303335619, ss5496362149	NC_000017.11:51108386:AA:	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
10429942338	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss3700581277	NC_000017.11:51108388:AA:	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss3742074820, ss3834896166, ss5222701442	NC_000017.10:49185747:A:	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3846557354, ss4312640732, ss5303335618, ss5496362150, ss5779003776	NC_000017.11:51108386:A:	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
10429942338	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3700581276	NC_000017.11:51108389:A:	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss5222701441	NC_000017.10:49185747::A	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss4312640728, ss5303335617, ss5496362152, ss5779003775	NC_000017.11:51108386::A	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
10429942338	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss3700581275	NC_000017.11:51108390::A	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss5222701443	NC_000017.10:49185747::AA	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
ss4312640729, ss5303335621, ss5779003778	NC_000017.11:51108386::AA	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
10429942338	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
ss4312640730	NC_000017.11:51108386::AAA	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA	(self)
ss4312640731	NC_000017.11:51108386::AAAAAAAAAAA… NC_000017.11:51108386::AAAAAAAAAAAAAAAAA	NC_000017.11:51108386:AAAAAAAAAAAA… NC_000017.11:51108386:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs71355710

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs71355710