SNP Links for Gene (Select 101926930) - SNP

Links from Gene

Items: 1 to 20 of 6506

<< First< Prev

Page of 326

Next >Last >>

Select item 14914796891.

rs1491479689 [Homo sapiens]

Variant type:: INS
Alleles:: ->A,AA,AAA [Show Flanks]
Chromosome:: 13:60695797 (GRCh38)
13:61269932 (GRCh37)
Canonical SPDI:: NC_000013.11:60695797::A,NC_000013.11:60695797::AA,NC_000013.11:60695797::AAA
Gene:: LINC00378 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0./0 (ALFA)
AA=0.00111/2 (Korea1K)
AA=0.00857/299 (GnomAD)
HGVS:: NC_000013.11:g.60695797_60695798insA, NC_000013.11:g.60695797_60695798insAA, NC_000013.11:g.60695797_60695798insAAA, NC_000013.10:g.61269931_61269932insA, NC_000013.10:g.61269931_61269932insAA, NC_000013.10:g.61269931_61269932insAAA, NR_047003.1:n.510_511insA, NR_047003.1:n.510_511insAA, NR_047003.1:n.510_511insAAA

Select item 14914492952.

rs1491449295 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 13:60675057 (GRCh38)
13:61249192 (GRCh37)
Canonical SPDI:: NC_000013.11:60675057:C:CC
Gene:: LINC00378 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0.005145/23 (ALFA)
C=0.002816/395 (GnomAD)
C=0.005134/23 (Estonian)
HGVS:: NC_000013.11:g.60675058dup, NC_000013.10:g.61249192dup

Select item 14913855643.

rs1491385564 [Homo sapiens]

Variant type:: DEL
Alleles:: GC>- [Show Flanks]
Chromosome:: 13:60695797 (GRCh38)
13:61269931 (GRCh37)
Canonical SPDI:: NC_000013.11:60695796:GC:
Gene:: LINC00378 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.00021/4 (TOMMO)
HGVS:: NC_000013.11:g.60695797_60695798del, NC_000013.10:g.61269931_61269932del, NR_047003.1:n.510_511del

Select item 14913269144.

rs1491326914 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CACGTATA,CATGTATA,CATGTATATATACACATATACACACGTATA,CATGTATATATACACATATACACATATACATGTATA,CATGTATATATACACATATACACATATACATGTCTATATACACATATACACCTATA,CATGTATATATACACATATACACGTATA,CGTATA [Show Flanks]
Chromosome:: 13:60681618 (GRCh38)
13:61255753 (GRCh37)
Canonical SPDI:: NC_000013.11:60681618:TATA:TATACACGTATA,NC_000013.11:60681618:TATA:TATACATGTATA,NC_000013.11:60681618:TATA:TATACATGTATATATACACATATACACACGTATA,NC_000013.11:60681618:TATA:TATACATGTATATATACACATATACACATATACATGTATA,NC_000013.11:60681618:TATA:TATACATGTATATATACACATATACACATATACATGTCTATATACACATATACACCTATA,NC_000013.11:60681618:TATA:TATACATGTATATATACACATATACACGTATA,NC_000013.11:60681618:TATA:TATACGTATA
Gene:: LINC00378 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATACATGTATA=0./0 (ALFA)
TATACATG=0.00011/3 (TOMMO)
HGVS:: NC_000013.11:g.60681619_60681622TA[2]CACGTATA[1], NC_000013.11:g.60681619_60681622TA[2]CATGTATA[1], NC_000013.11:g.60681619_60681622TA[2]CATGTATATATACACATATACACACGTATA[1], NC_000013.11:g.60681619_60681622TA[2]CATGTATATATACACATATACACATATACATGTATA[1], NC_000013.11:g.60681619_60681622TA[2]CATGTATATATACACATATACACATATACATGTCTATATACACATATACACCTATA[1], NC_000013.11:g.60681619_60681622TA[2]CATGTATATATACACATATACACGTATA[1], NC_000013.11:g.60681619_60681622TA[2]CGTATA[1], NC_000013.10:g.61255753_61255756TA[2]CACGTATA[1], NC_000013.10:g.61255753_61255756TA[2]CATGTATA[1], NC_000013.10:g.61255753_61255756TA[2]CATGTATATATACACATATACACACGTATA[1], NC_000013.10:g.61255753_61255756TA[2]CATGTATATATACACATATACACATATACATGTATA[1], NC_000013.10:g.61255753_61255756TA[2]CATGTATATATACACATATACACATATACATGTCTATATACACATATACACCTATA[1], NC_000013.10:g.61255753_61255756TA[2]CATGTATATATACACATATACACGTATA[1], NC_000013.10:g.61255753_61255756TA[2]CGTATA[1]

Select item 14912281245.

rs1491228124 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 13:60680822 (GRCh38)
13:61254957 (GRCh37)
Canonical SPDI:: NC_000013.11:60680822::G
Gene:: LINC00378 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.60680822_60680823insG, NC_000013.10:g.61254956_61254957insG

Select item 14912228056.

rs1491222805 has merged into rs3048771 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA [Show Flanks]
Chromosome:: 13:60671219 (GRCh38)
13:61245353 (GRCh37)
Canonical SPDI:: NC_000013.11:60671207:AAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000013.11:60671207:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000013.11:60671207:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000013.11:60671207:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000013.11:60671207:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000013.11:60671207:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000013.11:60671207:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000013.11:60671207:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000013.11:60671207:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA
Gene:: LINC00378 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAA=0./0 (ALFA)
-=0.375/15 (GENOME_DK)
AAA=0.4105/2056 (1000Genomes)
HGVS:: NC_000013.11:g.60671219_60671224del, NC_000013.11:g.60671220_60671224del, NC_000013.11:g.60671221_60671224del, NC_000013.11:g.60671222_60671224del, NC_000013.11:g.60671223_60671224del, NC_000013.11:g.60671224del, NC_000013.11:g.60671224dup, NC_000013.11:g.60671223_60671224dup, NC_000013.11:g.60671222_60671224dup, NC_000013.10:g.61245353_61245358del, NC_000013.10:g.61245354_61245358del, NC_000013.10:g.61245355_61245358del, NC_000013.10:g.61245356_61245358del, NC_000013.10:g.61245357_61245358del, NC_000013.10:g.61245358del, NC_000013.10:g.61245358dup, NC_000013.10:g.61245357_61245358dup, NC_000013.10:g.61245356_61245358dup

Select item 14911979687.

rs1491197968 [Homo sapiens]

Variant type:: DEL
Alleles:: AT>- [Show Flanks]
Chromosome:: 13:60681596 (GRCh38)
13:61255730 (GRCh37)
Canonical SPDI:: NC_000013.11:60681595:AT:
Gene:: LINC00378 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00017/2 (ALFA)
HGVS:: NC_000013.11:g.60681596_60681597del, NC_000013.10:g.61255730_61255731del

Select item 14911310688.

rs1491131068 [Homo sapiens]

Variant type:: DEL
Alleles:: TA>- [Show Flanks]
Chromosome:: 13:60671207 (GRCh38)
13:61245341 (GRCh37)
Canonical SPDI:: NC_000013.11:60671206:TA:
Gene:: LINC00378 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0.00008/1 (ALFA)
-=0.00002/2 (GnomAD)
HGVS:: NC_000013.11:g.60671207_60671208del, NC_000013.10:g.61245341_61245342del

Select item 14911199159.

rs1491119915 has merged into rs5804007 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTT>-,TTTTTT,TTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 13:60695202 (GRCh38)
13:61269336 (GRCh37)
Canonical SPDI:: NC_000013.11:60695196:TTTTTTTTTTTTT:TTTTT,NC_000013.11:60695196:TTTTTTTTTTTTT:TTTTTTTTTTT,NC_000013.11:60695196:TTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000013.11:60695196:TTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000013.11:60695196:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000013.11:60695196:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000013.11:60695196:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: LINC00378 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTTTT=0./0 (ALFA)
-=0.2548/1276 (1000Genomes)
HGVS:: NC_000013.11:g.60695202_60695209del, NC_000013.11:g.60695208_60695209del, NC_000013.11:g.60695209del, NC_000013.11:g.60695209dup, NC_000013.11:g.60695208_60695209dup, NC_000013.11:g.60695207_60695209dup, NC_000013.11:g.60695209_60695210insTTTTTTTTTTTTTTTTTTT, NC_000013.10:g.61269336_61269343del, NC_000013.10:g.61269342_61269343del, NC_000013.10:g.61269343del, NC_000013.10:g.61269343dup, NC_000013.10:g.61269342_61269343dup, NC_000013.10:g.61269341_61269343dup, NC_000013.10:g.61269343_61269344insTTTTTTTTTTTTTTTTTTT

Select item 149105514010.

rs1491055140 has merged into rs34007540 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAA>-,A,AA,AAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 13:60695811 (GRCh38)
13:61269945 (GRCh37)
Canonical SPDI:: NC_000013.11:60695798:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000013.11:60695798:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000013.11:60695798:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000013.11:60695798:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000013.11:60695798:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000013.11:60695798:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000013.11:60695798:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000013.11:60695798:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000013.11:60695798:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:60695798:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:60695798:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:60695798:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:60695798:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: LINC00378 (Varview)
Functional Consequence:: 500B_downstream_variant,non_coding_transcript_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAA=0./0 (ALFA)
-=0.2752/1378 (1000Genomes)
HGVS:: NC_000013.11:g.60695811_60695814del, NC_000013.11:g.60695812_60695814del, NC_000013.11:g.60695813_60695814del, NC_000013.11:g.60695814del, NC_000013.11:g.60695814dup, NC_000013.11:g.60695813_60695814dup, NC_000013.11:g.60695812_60695814dup, NC_000013.11:g.60695811_60695814dup, NC_000013.11:g.60695807_60695814dup, NC_000013.11:g.60695806_60695814dup, NC_000013.11:g.60695804_60695814dup, NC_000013.11:g.60695803_60695814dup, NC_000013.11:g.60695814_60695815insAAAAAAAAAAAAAAAAAAAAAAA, NC_000013.10:g.61269945_61269948del, NC_000013.10:g.61269946_61269948del, NC_000013.10:g.61269947_61269948del, NC_000013.10:g.61269948del, NC_000013.10:g.61269948dup, NC_000013.10:g.61269947_61269948dup, NC_000013.10:g.61269946_61269948dup, NC_000013.10:g.61269945_61269948dup, NC_000013.10:g.61269941_61269948dup, NC_000013.10:g.61269940_61269948dup, NC_000013.10:g.61269938_61269948dup, NC_000013.10:g.61269937_61269948dup, NC_000013.10:g.61269948_61269949insAAAAAAAAAAAAAAAAAAAAAAA

Select item 149097872711.

rs1490978727 [Homo sapiens]

Variant type:: DELINS
Alleles:: GCACAT>- [Show Flanks]
Chromosome:: 13:60681460 (GRCh38)
13:61255594 (GRCh37)
Canonical SPDI:: NC_000013.11:60681449:ACATGCACATGCACAT:ACATGCACAT
Gene:: LINC00378 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACATGCACAT=0./0 (ALFA)
-=0.000014/2 (GnomAD)
-=0.000026/7 (TOPMED)
HGVS:: NC_000013.11:g.60681454GCACAT[1], NC_000013.10:g.61255588GCACAT[1]

Select item 149088560112.

rs1490885601 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:60686471 (GRCh38)
13:61260605 (GRCh37)
Canonical SPDI:: NC_000013.11:60686470:C:T
Gene:: LINC00378 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000142/2 (ALFA)
T=0.000026/7 (TOPMED)
HGVS:: NC_000013.11:g.60686471C>T, NC_000013.10:g.61260605C>T

Select item 149082751813.

rs1490827518 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 13:60673891 (GRCh38)
13:61248025 (GRCh37)
Canonical SPDI:: NC_000013.11:60673890:A:T
Gene:: LINC00378 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000013.11:g.60673891A>T, NC_000013.10:g.61248025A>T

Select item 149079208614.

rs1490792086 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 13:60672993 (GRCh38)
13:61247127 (GRCh37)
Canonical SPDI:: NC_000013.11:60672992:A:T
Gene:: LINC00378 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000029/4 (GnomAD)
HGVS:: NC_000013.11:g.60672993A>T, NC_000013.10:g.61247127A>T, NR_047003.1:n.39A>T

Select item 149064822315.

rs1490648223 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 13:60674367 (GRCh38)
13:61248501 (GRCh37)
Canonical SPDI:: NC_000013.11:60674366:G:C
Gene:: LINC00378 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.60674367G>C, NC_000013.10:g.61248501G>C

Select item 149048621616.

rs1490486216 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:60681898 (GRCh38)
13:61256032 (GRCh37)
Canonical SPDI:: NC_000013.11:60681897:A:G
Gene:: LINC00378 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.60681898A>G, NC_000013.10:g.61256032A>G

Select item 149045788617.

rs1490457886 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 13:60692701 (GRCh38)
13:61266835 (GRCh37)
Canonical SPDI:: NC_000013.11:60692700:G:A,NC_000013.11:60692700:G:T
Gene:: LINC00378 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000106/2 (TOMMO)
HGVS:: NC_000013.11:g.60692701G>A, NC_000013.11:g.60692701G>T, NC_000013.10:g.61266835G>A, NC_000013.10:g.61266835G>T, NG_046839.1:g.2241G>A, NG_046839.1:g.2241G>T

Select item 149044583418.

rs1490445834 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:60680621 (GRCh38)
13:61254755 (GRCh37)
Canonical SPDI:: NC_000013.11:60680620:C:T
Gene:: LINC00378 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000013.11:g.60680621C>T, NC_000013.10:g.61254755C>T

Select item 149043014119.

rs1490430141 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:60679829 (GRCh38)
13:61253963 (GRCh37)
Canonical SPDI:: NC_000013.11:60679828:A:G
Gene:: LINC00378 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.60679829A>G, NC_000013.10:g.61253963A>G

Select item 149041616220.

rs1490416162 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:60684263 (GRCh38)
13:61258397 (GRCh37)
Canonical SPDI:: NC_000013.11:60684262:C:T
Gene:: LINC00378 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.60684263C>T, NC_000013.10:g.61258397C>T

<< First< Prev

Page of 326

Next >Last >>

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 6506

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity