SNP Links for Gene (Select 101929697) - SNP

Warning: The NCBI web site requires JavaScript to function. more...

Links from Gene

Items: 1 to 20 of 6764

<< First< Prev

Page of 339

Next >Last >>

Select item 14914848961.

rs1491484896 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 3:195842116 (GRCh38)
3:195568987 (GRCh37)
Canonical SPDI:: NC_000003.12:195842115:CA:
Gene:: LINC01983 (Varview), LOC107984010 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00008/1 (ALFA)
HGVS:: NC_000003.12:g.195842116_195842117del, NC_000003.11:g.195568987_195568988del

Select item 14914202172.

rs1491420217 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CA,CACA [Show Flanks]
Chromosome:: 3:195838218 (GRCh38)
3:195565090 (GRCh37)
Canonical SPDI:: NC_000003.12:195838218:A:ACA,NC_000003.12:195838218:A:ACACA
Gene:: LINC01983 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACACA=0./0 (ALFA)
HGVS:: NC_000003.12:g.195838219_195838220insCA, NC_000003.12:g.195838219_195838220insCACA, NC_000003.11:g.195565090_195565091insCA, NC_000003.11:g.195565090_195565091insCACA

Select item 14913794063.

rs1491379406 has merged into rs58678449 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>-,CTCT,CTCTCT [Show Flanks]
Chromosome:: 3:195857563 (GRCh38)
3:195584434 (GRCh37)
Canonical SPDI:: NC_000003.12:195857553:TCTCTCTCTCT:TCTCTCTCT,NC_000003.12:195857553:TCTCTCTCTCT:TCTCTCTCTCTCT,NC_000003.12:195857553:TCTCTCTCTCT:TCTCTCTCTCTCTCT
Gene:: LINC01983 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TCTCTCTCTCTCTCT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.237079/422 (Korea1K)
-=0.27256/4565 (TOMMO)
-=0.27619/58 (Vietnamese)
TC=0.352941/12 (GENOME_DK)
-=0.451437/2261 (1000Genomes)
-=0.453177/271 (NorthernSweden)
-=0.478329/2141 (Estonian)
HGVS:: NC_000003.12:g.195857555CT[4], NC_000003.12:g.195857555CT[6], NC_000003.12:g.195857555CT[7], NC_000003.11:g.195584426CT[4], NC_000003.11:g.195584426CT[6], NC_000003.11:g.195584426CT[7]

Select item 14913782074.

rs1491378207 [Homo sapiens]

Variant type:: INS
Alleles:: ->CTCTCTTTCTTTCTTTCTCC [Show Flanks]
Chromosome:: 3:195845752 (GRCh38)
3:195572624 (GRCh37)
Canonical SPDI:: NC_000003.12:195845752::CTCTCTTTCTTTCTTTCTCC
Gene:: LINC01983 (Varview), LOC107984010 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by cluster
MAF:: CTCTCTTTCTTTCTTTCTCC=0.00682/114 (TOMMO)
CTCTCTTTCTTTCTTTCTCC=0.01094/20 (Korea1K)
HGVS:: NC_000003.12:g.195845752_195845753insCTCTCTTTCTTTCTTTCTCC, NC_000003.11:g.195572623_195572624insCTCTCTTTCTTTCTTTCTCC

Select item 14913327695.

rs1491332769 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>- [Show Flanks]
Chromosome:: 3:195845753 (GRCh38)
3:195572624 (GRCh37)
Canonical SPDI:: NC_000003.12:195845751:TAT:T
Gene:: LINC01983 (Varview), LOC107984010 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by cluster
MAF:: -=0.000101/14 (GnomAD)
HGVS:: NC_000003.12:g.195845753_195845754del, NC_000003.11:g.195572624_195572625del

Select item 14913290436.

rs1491329043 has merged into rs908916132 [Homo sapiens]

Variant type:: DELINS
Alleles:: TA>-,TATA,TATATA [Show Flanks]
Chromosome:: 3:195838220 (GRCh38)
3:195565091 (GRCh37)
Canonical SPDI:: NC_000003.12:195838217:TATA:TA,NC_000003.12:195838217:TATA:TATATA,NC_000003.12:195838217:TATA:TATATATA
Gene:: LINC01983 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATATA=0./0 (ALFA)
-=0.000023/6 (TOPMED)
HGVS:: NC_000003.12:g.195838218TA[1], NC_000003.12:g.195838218TA[3], NC_000003.12:g.195838218TA[4], NC_000003.11:g.195565089TA[1], NC_000003.11:g.195565089TA[3], NC_000003.11:g.195565089TA[4]

Select item 14913261447.

rs1491326144 has merged into rs55858449 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAA>-,AAA,AAAA,AAAAA,AAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAA [Show Flanks]
Chromosome:: 3:195842129 (GRCh38)
3:195569000 (GRCh37)
Canonical SPDI:: NC_000003.12:195842116:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000003.12:195842116:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000003.12:195842116:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000003.12:195842116:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000003.12:195842116:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000003.12:195842116:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000003.12:195842116:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000003.12:195842116:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:195842116:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:195842116:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: LINC01983 (Varview), LOC107984010 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.182573/88 (NorthernSweden)
-=0.335663/1681 (1000Genomes)
HGVS:: NC_000003.12:g.195842129_195842135del, NC_000003.12:g.195842132_195842135del, NC_000003.12:g.195842133_195842135del, NC_000003.12:g.195842134_195842135del, NC_000003.12:g.195842135del, NC_000003.12:g.195842135dup, NC_000003.12:g.195842134_195842135dup, NC_000003.12:g.195842133_195842135dup, NC_000003.12:g.195842132_195842135dup, NC_000003.12:g.195842130_195842135dup, NC_000003.11:g.195569000_195569006del, NC_000003.11:g.195569003_195569006del, NC_000003.11:g.195569004_195569006del, NC_000003.11:g.195569005_195569006del, NC_000003.11:g.195569006del, NC_000003.11:g.195569006dup, NC_000003.11:g.195569005_195569006dup, NC_000003.11:g.195569004_195569006dup, NC_000003.11:g.195569003_195569006dup, NC_000003.11:g.195569001_195569006dup

Select item 14909669378.

rs1490966937 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:195845501 (GRCh38)
3:195572372 (GRCh37)
Canonical SPDI:: NC_000003.12:195845500:A:G
Gene:: LINC01983 (Varview), LOC107984010 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000283/5 (TOMMO)
HGVS:: NC_000003.12:g.195845501A>G, NC_000003.11:g.195572372A>G

Select item 14907986219.

rs1490798621 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:195857685 (GRCh38)
3:195584556 (GRCh37)
Canonical SPDI:: NC_000003.12:195857684:T:C
Gene:: LINC01983 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000003.12:g.195857685T>C, NC_000003.11:g.195584556T>C

Select item 149066524510.

rs1490665245 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:195842347 (GRCh38)
3:195569218 (GRCh37)
Canonical SPDI:: NC_000003.12:195842346:T:C
Gene:: LINC01983 (Varview), LOC107984010 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00379/45 (ALFA)
C=0.00011/7 (GnomAD)
C=0.00288/21 (TOMMO)
C=0.00672/5 (Korea1K)
T=0.01786/1 (SGDP_PRJ)
C=0.22484/362 (KOREAN)
HGVS:: NC_000003.12:g.195842347T>C, NC_000003.11:g.195569218T>C

Select item 149048800011.

rs1490488000 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:195849571 (GRCh38)
3:195576442 (GRCh37)
Canonical SPDI:: NC_000003.12:195849570:G:A
Gene:: LINC01983 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.195849571G>A, NC_000003.11:g.195576442G>A

Select item 149028203112.

rs1490282031 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 3:195859533 (GRCh38)
3:195586404 (GRCh37)
Canonical SPDI:: NC_000003.12:195859532:C:G,NC_000003.12:195859532:C:T
Gene:: LINC01983 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000342/1 (KOREAN)
HGVS:: NC_000003.12:g.195859533C>G, NC_000003.12:g.195859533C>T, NC_000003.11:g.195586404C>G, NC_000003.11:g.195586404C>T

Select item 149019491313.

rs1490194913 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 3:195862046 (GRCh38)
3:195588917 (GRCh37)
Canonical SPDI:: NC_000003.12:195862045:C:G
Gene:: LINC01983 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000003.12:g.195862046C>G, NC_000003.11:g.195588917C>G, NG_029779.1:g.51964G>C

Select item 149016885614.

rs1490168856 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:195846728 (GRCh38)
3:195573599 (GRCh37)
Canonical SPDI:: NC_000003.12:195846727:A:G
Gene:: LINC01983 (Varview), LOC107984010 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.195846728A>G, NC_000003.11:g.195573599A>G

Select item 149003927615.

rs1490039276 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 3:195843126 (GRCh38)
3:195569997 (GRCh37)
Canonical SPDI:: NC_000003.12:195843125:G:A,NC_000003.12:195843125:G:T
Gene:: LINC01983 (Varview), LOC107984010 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000003.12:g.195843126G>A, NC_000003.12:g.195843126G>T, NC_000003.11:g.195569997G>A, NC_000003.11:g.195569997G>T

Select item 149000644316.

rs1490006443 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CTTTCCTT [Show Flanks]
Chromosome:: 3:195845680 (GRCh38)
3:195572552 (GRCh37)
Canonical SPDI:: NC_000003.12:195845680:TTCTTTCCTT:TTCTTTCCTTCTTTCCTT
Gene:: LINC01983 (Varview), LOC107984010 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTCTTTCCTTCTTTCCTT=0.000084/1 (ALFA)
TTCTTTCC=0.000186/26 (GnomAD)
TTCTTTCC=0.000625/4 (1000Genomes)
HGVS:: NC_000003.12:g.195845683_195845690dup, NC_000003.11:g.195572554_195572561dup

Select item 148998385917.

rs1489983859 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C,G [Show Flanks]
Chromosome:: 3:195843893 (GRCh38)
3:195570764 (GRCh37)
Canonical SPDI:: NC_000003.12:195843892:T:A,NC_000003.12:195843892:T:C,NC_000003.12:195843892:T:G
Gene:: LINC01983 (Varview), LOC107984010 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000019/5 (TOPMED)
G=0.009847/18 (Korea1K)
HGVS:: NC_000003.12:g.195843893T>A, NC_000003.12:g.195843893T>C, NC_000003.12:g.195843893T>G, NC_000003.11:g.195570764T>A, NC_000003.11:g.195570764T>C, NC_000003.11:g.195570764T>G, NG_025778.1:g.6T>A, NG_025778.1:g.6T>C, NG_025778.1:g.6T>G

Select item 148989597018.

rs1489895970 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 3:195855096 (GRCh38)
3:195581967 (GRCh37)
Canonical SPDI:: NC_000003.12:195855095:A:C
Gene:: LINC01983 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.195855096A>C, NC_000003.11:g.195581967A>C

Select item 148987748619.

rs1489877486 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 3:195842726 (GRCh38)
3:195569597 (GRCh37)
Canonical SPDI:: NC_000003.12:195842725:C:A,NC_000003.12:195842725:C:T
Gene:: LINC01983 (Varview), LOC107984010 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00795/10 (KOREAN)
A=0.25/1 (SGDP_PRJ)
HGVS:: NC_000003.12:g.195842726C>A, NC_000003.12:g.195842726C>T, NC_000003.11:g.195569597C>A, NC_000003.11:g.195569597C>T

Select item 148972075720.

rs1489720757 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:195848372 (GRCh38)
3:195575243 (GRCh37)
Canonical SPDI:: NC_000003.12:195848371:G:A
Gene:: LINC01983 (Varview), LOC107984010 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.195848372G>A, NC_000003.11:g.195575243G>A