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SRX484816: Whole genome shotgun sequencing of Salmonella enterica subsp. serovar Enteritidis str. swgs1019 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 2.3M spots, 1.1G bases, 683Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FSIS SRCAMB
Study: GenomeTrakr real-time SE: NY State Dept. of Health, Wadsworth Center
PRJNA227458 • SRP033012 • All experiments • All runs
show Abstracthide Abstract
Surveillance of Salmonella Enteritidis using SNP based phylogenetic analysis
Sample:
SAMN02676283 • SRS569044 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar Enteritidis
Library:
Name: Salmonella enterica str. swgs1019 shotgun
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. serovar Enteritidis str. swgs1019.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.42
Runs: 1 run, 2.3M spots, 1.1G bases, 683Mb
Run# of Spots# of BasesSizePublished
SRR11875672,329,4311.1G683Mb2014-03-14

ID:
674889

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