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SRX1868771: Whole genome shotgun sequencing of Listeria monocytogenes by Illumina HiSeq 2000
1 ILLUMINA (Illumina HiSeq 2000) run: 3.2M spots, 643.3M bases, 394.6Mb downloads

External Id: EXT00193297
Design: HiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)
Study: FDA CFSAN, 100K Genome Project
PRJNA209204 • SRP078064 • All experiments • All runs
show Abstracthide Abstract
Food and Drug Administration, Center for Food Safety and Applied Nutrition, 100K Pathogen Genome Project. Major food bacterial pathogens in the United States and around the world, including Salmonella enterica, E. coli, Shigella, Listeria monocytogenes, Campylobacter Jejuni, Vibrio parahaemolyticus.
Sample: Pathogen sample from Listeria monocytogenes
SAMN02211926 • SRS1519558 • All experiments • All runs
Organism: Listeria monocytogenes
Library:
Name: Listeria monocytogenes KAPA HTP shotgun
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina KAPA HTP library created for Listeria monocytogenes.
Spot descriptor:
1  forward101  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLbcl2fastq1.8
Runs: 1 run, 3.2M spots, 643.3M bases, 394.6Mb
Run# of Spots# of BasesSizePublished
SRR37078943,216,645643.3M394.6Mb2016-06-21

ID:
2665613

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