Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX422823: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-293499' containing sample 'Staphylococcus aureus F41906'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.1M spots, 826.7M bases, 414.4Mb downloads

UUID: 1469186d-5de0-4eee-bab9-e64408bb3202

Design: Illumina sequencing of Staphylococcus aureus F41906 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224321 • SRP035020 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F41906

SAMN02383611 • SRS526874 • All experiments • All runs

Organism: Staphylococcus aureus F41906

Library:

Name: Pond-293499

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 433181.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:53J83

material_type: DNA:DNA Somatic

product_order: PDO-2339

product_part_number: P-WG-0004

project: G50698

research_project: RP-509

root_sample_id: SM-4T4S9

sample_id: SM-53J83

work_request: 38889

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-11 07:33:15.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.1M spots, 826.7M bases, 414.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1103424	2,016,788	407.4M	204.1Mb	2014-01-07
SRR1103440	2,075,891	419.3M	210.3Mb	2014-01-07

ID:: 598297

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity