Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX392172: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-295494' containing sample 'Staphylococcus aureus T82627'
1 ILLUMINA (Illumina HiSeq 2000) run: 4.1M spots, 822.1M bases, 433.4Mb downloads

UUID: d0dda5e6-648e-4775-a169-a65f7afe9fef

Design: Illumina sequencing of Staphylococcus aureus T82627 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224659 • SRP034245 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus T82627

SAMN02384124 • SRS515347 • All experiments • All runs

Organism: Staphylococcus aureus T82627

Library:

Name: Pond-295494

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 435342.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:543JY

material_type: DNA:DNA Somatic

product_order: PDO-2359

product_part_number: P-WG-0004

project: G51079

research_project: RP-509

root_sample_id: SM-4T3G2

sample_id: SM-543JY

work_request: 38946

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-02 16:38:07.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 4.1M spots, 822.1M bases, 433.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1050054	4,069,680	822.1M	433.4Mb	2013-12-15

ID:: 563019

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