Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX467891: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315478' containing sample 'Staphylococcus aureus H59325'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6.5M spots, 1.3G bases, 685.4Mb downloads

UUID: 2510dc76-3285-4ad9-ac4c-0bdad638d034

Design: Illumina sequencing of Staphylococcus aureus H59325 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227687 • SRP037097 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus H59325

SAMN02402611 • SRS555448 • All experiments • All runs

Organism: Staphylococcus aureus H59325

Library:

Name: Pond-315478

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 462621.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5ASRB

material_type: DNA:DNA Somatic

product_order: PDO-2503

product_part_number: P-WG-0004

project: G53981

research_project: RP-509

root_sample_id: SM-4T1KG

sample_id: SM-5ASRB

work_request: 39228

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 02:47:49.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6.5M spots, 1.3G bases, 685.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1165475	3,206,920	647.8M	339.7Mb	2014-02-09
SRR1167064	3,279,602	662.5M	345.7Mb	2014-02-11

ID:: 648079

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity