Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX555675: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318400' containing sample 'VET0395R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.5M spots, 708.7M bases, 338Mb downloads

UUID: 4fd65ecb-ea67-457d-b0d8-893ceb31a2bc

Design: Illumina sequencing of Staphylococcus aureus VET0395R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228721 • SRP042435 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0395R

SAMN02404211 • SRS622765 • All experiments • All runs

Organism: Staphylococcus aureus VET0395R

Library:

Name: Pond-318400

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470129.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8UQ

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55151

research_project: RP-513

root_sample_id: SM-4PMVC

sample_id: SM-5C8UQ

work_request: 39366

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:23.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.5M spots, 708.7M bases, 338Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303275	1,748,130	353.1M	168.6Mb	2014-05-29
SRR1322226	1,760,268	355.6M	169.4Mb	2014-06-03

ID:: 794685

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