Mapped reads for uncultivated Tissierella sp. UBA8880 genome recovere... - SRA

SRX3576197: Mapped reads for uncultivated Tissierella sp. UBA8880 genome recovered from SRX822889
1 ILLUMINA (Illumina HiSeq 2500) run: 95,913 spots, 20M bases, 3.3Mb downloads

Design: Reads from SRX822889 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA8880 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

show Abstracthide Abstract

Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Tissierella sp. UBA8880 genome recovered from SRX822889

SAMN08017600 • SRS2846079 • All experiments • All runs

Organism: Tissierella sp.

Library:

Name: UBA8880_library

Instrument: Illumina HiSeq 2500

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 95,913 spots, 20M bases, 3.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR6486210	95,913	20M	3.3Mb	2018-02-23

ID:: 4961699

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