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SRX3572986: Mapped reads for uncultivated Cryomorphaceae bacterium UBA9920 genome recovered from SRX1050771
1 ILLUMINA (Illumina HiSeq 2500) run: 139,068 spots, 25.1M bases, 6.7Mb downloads

Design: Reads from SRX1050771 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA9920 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Cryomorphaceae bacterium UBA9920 genome recovered from SRX1050771
SAMN08017658 • SRS2843953 • All experiments • All runs
Library:
Name: UBA9920_library
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 139,068 spots, 25.1M bases, 6.7Mb
Run# of Spots# of BasesSizePublished
SRR6482988139,06825.1M6.7Mb2018-03-05

ID:
4958488

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