Mapped reads for uncultivated Desulfotomaculum bacterium UBA8926 geno... - SRA

SRX3575745: Mapped reads for uncultivated Desulfotomaculum bacterium UBA8926 genome recovered from SRX559894
1 ILLUMINA (Illumina HiSeq 2000) run: 9.6M spots, 2.1G bases, 374.4Mb downloads

Design: Reads from SRX559894 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA8926 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

show Abstracthide Abstract

Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Desulfotomaculum bacterium UBA8926 genome recovered from SRX559894

SAMN08018497 • SRS2845628 • All experiments • All runs

Organism: Desulfotomaculum sp.

Library:

Name: UBA8926_library

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 9.6M spots, 2.1G bases, 374.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR6485642	9,589,261	2.1G	374.4Mb	2018-02-23

ID:: 4961247

SRA

Sequence Read Archive

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