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SRX3577628: Mapped reads for uncultivated Cyanobacteria bacterium UBA11440 genome recovered from ERX592909
1 ILLUMINA (Illumina HiSeq 2000) run: 6.5M spots, 1.3G bases, 623.6Mb downloads

Design: Reads from ERX592909 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA11440 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Cyanobacteria bacterium UBA11440 genome recovered from ERX592909
SAMN08019353 • SRS2847357 • All experiments • All runs
Library:
Name: UBA11440_library
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 6.5M spots, 1.3G bases, 623.6Mb
Run# of Spots# of BasesSizePublished
SRR64876576,476,4431.3G623.6Mb2018-02-23

ID:
4963130

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