Mapped reads for uncultivated Leclercia sp. UBA9585 genome recovered ... - SRA

SRX3572832: Mapped reads for uncultivated Leclercia sp. UBA9585 genome recovered from SRX822328
1 ILLUMINA (Illumina HiSeq 2500) run: 203,566 spots, 47.6M bases, 10.2Mb downloads

Design: Reads from SRX822328 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA9585 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

show Abstracthide Abstract

Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Leclercia sp. UBA9585 genome recovered from SRX822328

SAMN08020312 • SRS2843802 • All experiments • All runs

Organism: Leclercia sp.

Library:

Name: UBA9585_library

Instrument: Illumina HiSeq 2500

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 203,566 spots, 47.6M bases, 10.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR6483142	203,566	47.6M	10.2Mb	2018-03-05

ID:: 4958334

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Sequence Read Archive

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