Ilumina sequencing of Pseudomonas chlororaphis subsp. chlororaphis af... - SRA

SRX23765138: Ilumina sequencing of Pseudomonas chlororaphis subsp. chlororaphis after evolving for ~400 generation with Pseudomonas Fluroescens
1 ILLUMINA (NextSeq 2000) run: 3.2M spots, 961.5M bases, 310.3Mb downloads

Design: Genomic DNA was extracted from each sample with the Bacterial Genomic DNA Kit (NORGEN Biotek, #17900) according to the manufacturers instructions. The libraries for Illumina sequencing were constructed according to standard protocols using the Illumina DNA prep kit and IDT 10 bp UDI indices sequencing facility at SEQCENTER. The samples were sequenced on an Illumina NextSeq 2000. Demultiplexing, quality control, and adapter trimming were performed by the sequencing center with bcl-convert.

Submitted by: The Hebrew University of Jerusalem

Study: Evolution in microbial microcosms is highly parallel regardless of the presence of interacting species

PRJNA1080086 • SRP492033 • All experiments • All runs

show Abstracthide Abstract

Genome sequences from experimental evolution of 11 bacterial species evolved for ~400 generations with different partner species

Sample: Naive Pch evolved with Pf

SAMN40100876 • SRS20590779 • All experiments • All runs

Organism: Pseudomonas chlororaphis subsp. chlororaphis

Library:

Name: Pch_Exp14-p7C7_short_reads

Instrument: NextSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Runs: 1 run, 3.2M spots, 961.5M bases, 310.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR28120585	3,218,542	961.5M	310.3Mb	2024-02-27

ID:: 32056009

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