U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX298574: Whole Genome Sequencing of Salinispora arenicola CNS744
1 ILLUMINA (Illumina HiSeq 2000) run: 6.5M spots, 2G bases, 1.2Gb downloads

Submitted by: DOE JOINT GENOME INSTITUTE (JGI)
Study: Salinispora arenicola CNS744
show Abstracthide Abstract
Multiplexed sequencing for secondary metabolite discovery: the goal of this project is to generate draft genome sequences for 144 or more cultured marine actinomycetes. The focus is on the genus Salinispora, which has proven to be a rich source of unusual secondary metabolites. Multiple strains derived from different locations will provide opportunities to assess the ¿secondary metabolome¿ of a well-defined bacterial lineage and to better understand pathway evolution and how it generates structural complexity. This project provides a unique opportunity to apply genome-mining approaches to natural product discovery and to use population genomics to explore fundamental questions related to the ecology and evolution of bacteria.
Sample: Salinispora arenicola CNS744
SAMN02194386 • SRS438602 • All experiments • All runs
Library:
Name: CUUA
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol:
Spot descriptor:
forward151  forward

Runs: 1 run, 6.5M spots, 2G bases, 1.2Gb
Run# of Spots# of BasesSizePublished
SRR8919296,501,0922G1.2Gb2013-06-10

ID:
420865

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...