Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX363629: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-278008' containing sample 'Staphylococcus aureus M0909'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.3M spots, 671M bases, 308.3Mb downloads

UUID: 5aa37781-0bf7-4dd9-8f56-9f82619faa35

Design: Illumina sequencing of Staphylococcus aureus M0909 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216854 • SRP030904 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0909

SAMN02325805 • SRS490259 • All experiments • All runs

Organism: Staphylococcus aureus M0909

Library:

Name: Pond-278008

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 394154.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4T89T

material_type: DNA:DNA Somatic

product_order: PDO-1930

product_part_number: P-WG-0004

project: G46105

research_project: RP-433

root_sample_id: SM-4C9MB

sample_id: SM-4T89T

work_request: 37963

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 16:23:41.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.3M spots, 671M bases, 308.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1010731	1,639,432	331.2M	152.4Mb	2013-10-09
SRR1010732	1,682,384	339.8M	156Mb	2013-10-09

ID:: 516066

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