Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX391586: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-291708' containing sample 'Staphylococcus aureus S72396'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.6M spots, 1.1G bases, 622.9Mb downloads

UUID: 17d6706f-1827-45d0-90b6-77767a262853

Design: Illumina sequencing of Staphylococcus aureus S72396 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224423 • SRP033961 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus S72396

SAMN02383712 • SRS514820 • All experiments • All runs

Organism: Staphylococcus aureus S72396

Library:

Name: Pond-291708

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 427776.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:52PKA

material_type: DNA:DNA Somatic

product_order: PDO-2339

product_part_number: P-WG-0004

project: G50610

research_project: RP-509

root_sample_id: SM-4T4K6

sample_id: SM-52PKA

work_request: 38888

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-29 16:10:35.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.6M spots, 1.1G bases, 622.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1049273	2,801,606	565.9M	310.4Mb	2013-12-13
SRR1049274	2,823,591	570.4M	312.5Mb	2013-12-13

ID:: 562340

SRA

Sequence Read Archive

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