Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX391728: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-291765' containing sample 'Staphylococcus aureus PLAC6058'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.2M spots, 1.1G bases, 583.6Mb downloads

UUID: 218428e4-f84d-412d-926d-3929e85a776b

Design: Illumina sequencing of Staphylococcus aureus PLAC6058 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Orange County

PRJNA224077 • SRP034051 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus PLAC6058

SAMN02381834 • SRS514958 • All experiments • All runs

Organism: Staphylococcus aureus PLAC6058

Library:

Name: Pond-291765

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 427831.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:52PLW

material_type: DNA:DNA Somatic

product_order: PDO-2326

product_part_number: P-WG-0004

project: G50544

research_project: RP-493

root_sample_id: SM-4RVHV

sample_id: SM-52PLW

work_request: 38888

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-29 16:10:35.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.2M spots, 1.1G bases, 583.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1049491	2,588,380	522.9M	290.5Mb	2013-12-13
SRR1049492	2,613,601	527.9M	293.1Mb	2013-12-13

ID:: 562482

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