Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX468078: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315463' containing sample 'Staphylococcus aureus M24418'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.1M spots, 1G bases, 492.1Mb downloads

UUID: 109cfd07-8108-44f2-a5ba-663c24d46c43

Design: Illumina sequencing of Staphylococcus aureus M24418 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227611 • SRP037242 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M24418

SAMN02402535 • SRS555594 • All experiments • All runs

Organism: Staphylococcus aureus M24418

Library:

Name: Pond-315463

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 462772.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5ASVM

material_type: DNA:DNA Somatic

product_order: PDO-2503

product_part_number: P-WG-0004

project: G54035

research_project: RP-509

root_sample_id: SM-4T292

sample_id: SM-5ASVM

work_request: 39229

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 03:36:50.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.1M spots, 1G bases, 492.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1165738	2,555,526	516.2M	247.1Mb	2014-02-09
SRR1167408	2,544,267	513.9M	245.1Mb	2014-02-11

ID:: 648266

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