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    LRRD1 leucine rich repeats and death domain containing 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 482296, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LRRD1provided by VGNC
    Official Full Name
    leucine rich repeats and death domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:42819
    See related
    Ensembl:ENSCAFG00845012529
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See LRRD1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 14 NC_051818.1 (17588970..17629674, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 14 NC_006596.4 (17343238..17384482, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 14 NC_049235.1 (17735405..17776064, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 14 NC_049274.1 (17749948..17790351, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 14 NC_049755.1 (17461396..17502455, complement)

    Chromosome 14 - NC_051818.1Genomic Context describing neighboring genes Neighboring gene formin-like protein 5 Neighboring gene A-kinase anchoring protein 9 Neighboring gene cytochrome P450 family 51 subfamily A member 1 Neighboring gene ankyrin repeat and IBR domain containing 1 Neighboring gene mRNA turnover protein 4 homolog Neighboring gene RNA-binding protein EWS-like Neighboring gene KRIT1 ankyrin repeat containing

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat and death domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051818.1 Reference ROS_Cfam_1.0

      Range
      17588970..17629674 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038686410.1 → XP_038542338.1  leucine-rich repeat and death domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0TAJ6, A0A8I3NBU5
      Conserved Domains (4) summary
      PLN03150
      Location:161 → 239
      PLN03150; hypothetical protein; Provisional
      PLN00113
      Location:228 → 712
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:504 → 526
      LRR_RI; leucine-rich repeat [structural motif]
      cl14633
      Location:778 → 864
      DD; Death Domain Superfamily of protein-protein interaction domains

    2. XM_038686411.1 → XP_038542339.1  leucine-rich repeat and death domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0TAJ6, A0A8I3NBU5
      Related
      ENSCAFP00845017552.1, ENSCAFT00845022319.1
      Conserved Domains (4) summary
      PLN03150
      Location:161 → 239
      PLN03150; hypothetical protein; Provisional
      PLN00113
      Location:228 → 712
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:504 → 526
      LRR_RI; leucine-rich repeat [structural motif]
      cl14633
      Location:778 → 864
      DD; Death Domain Superfamily of protein-protein interaction domains

    3. XM_038686413.1 → XP_038542341.1  leucine-rich repeat and death domain-containing protein 1 isoform X3

      Conserved Domains (3) summary
      COG4886
      Location:2 → 98
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00031
      Location:15 → 37
      LRR_1; leucine-rich repeat [structural motif]
      cl14633
      Location:125 → 211
      DD; Death Domain Superfamily of protein-protein interaction domains

    4. XM_038686412.1 → XP_038542340.1  leucine-rich repeat and death domain-containing protein 1 isoform X2

      Conserved Domains (3) summary
      COG4886
      Location:67 → 201
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:69 → 91
      LRR_RI; leucine-rich repeat [structural motif]
      cl14633
      Location:228 → 314
      DD; Death Domain Superfamily of protein-protein interaction domains

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049274.1 Alternate UMICH_Zoey_3.1

      Range
      17749948..17790351 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038494494.1 → XP_038350422.1  leucine-rich repeat and death domain-containing protein 1 isoform X1

    2. XM_038494496.1 → XP_038350424.1  leucine-rich repeat and death domain-containing protein 1 isoform X1

    3. XM_038494495.1 → XP_038350423.1  leucine-rich repeat and death domain-containing protein 1 isoform X1

    4. XM_038494498.1 → XP_038350426.1  leucine-rich repeat and death domain-containing protein 1 isoform X3

    5. XM_038494497.1 → XP_038350425.1  leucine-rich repeat and death domain-containing protein 1 isoform X2

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049755.1 Alternate UNSW_CanFamBas_1.0

      Range
      17461396..17502455 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038620722.1 → XP_038476650.1  leucine-rich repeat and death domain-containing protein 1 isoform X1

      Conserved Domains (3) summary
      PLN00113
      Location:160 → 712
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:504 → 526
      LRR_RI; leucine-rich repeat [structural motif]
      cl14633
      Location:778 → 864
      DD; Death Domain Superfamily of protein-protein interaction domains

    2. XM_038620724.1 → XP_038476652.1  leucine-rich repeat and death domain-containing protein 1 isoform X1

      Conserved Domains (3) summary
      PLN00113
      Location:160 → 712
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:504 → 526
      LRR_RI; leucine-rich repeat [structural motif]
      cl14633
      Location:778 → 864
      DD; Death Domain Superfamily of protein-protein interaction domains

    3. XM_038620723.1 → XP_038476651.1  leucine-rich repeat and death domain-containing protein 1 isoform X1

      Conserved Domains (3) summary
      PLN00113
      Location:160 → 712
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:504 → 526
      LRR_RI; leucine-rich repeat [structural motif]
      cl14633
      Location:778 → 864
      DD; Death Domain Superfamily of protein-protein interaction domains

    4. XM_038620726.1 → XP_038476654.1  leucine-rich repeat and death domain-containing protein 1 isoform X3

      Conserved Domains (3) summary
      COG4886
      Location:2 → 98
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00031
      Location:15 → 37
      LRR_1; leucine-rich repeat [structural motif]
      cl14633
      Location:125 → 211
      DD; Death Domain Superfamily of protein-protein interaction domains

    5. XM_038620725.1 → XP_038476653.1  leucine-rich repeat and death domain-containing protein 1 isoform X2

      Conserved Domains (3) summary
      COG4886
      Location:67 → 201
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:69 → 91
      LRR_RI; leucine-rich repeat [structural motif]
      cl14633
      Location:228 → 314
      DD; Death Domain Superfamily of protein-protein interaction domains

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049235.1 Alternate UU_Cfam_GSD_1.0

      Range
      17735405..17776064 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038556788.1 → XP_038412716.1  leucine-rich repeat and death domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0TAJ6, A0A8I3NBU5
      Conserved Domains (4) summary
      PLN03150
      Location:161 → 239
      PLN03150; hypothetical protein; Provisional
      PLN00113
      Location:228 → 712
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:504 → 526
      LRR_RI; leucine-rich repeat [structural motif]
      cl14633
      Location:778 → 864
      DD; Death Domain Superfamily of protein-protein interaction domains

    2. XM_038556789.1 → XP_038412717.1  leucine-rich repeat and death domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0TAJ6, A0A8I3NBU5
      Conserved Domains (4) summary
      PLN03150
      Location:161 → 239
      PLN03150; hypothetical protein; Provisional
      PLN00113
      Location:228 → 712
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:504 → 526
      LRR_RI; leucine-rich repeat [structural motif]
      cl14633
      Location:778 → 864
      DD; Death Domain Superfamily of protein-protein interaction domains

    3. XM_038556791.1 → XP_038412719.1  leucine-rich repeat and death domain-containing protein 1 isoform X3

      Conserved Domains (3) summary
      COG4886
      Location:2 → 98
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00031
      Location:15 → 37
      LRR_1; leucine-rich repeat [structural motif]
      cl14633
      Location:125 → 211
      DD; Death Domain Superfamily of protein-protein interaction domains

    4. XM_038556790.1 → XP_038412718.1  leucine-rich repeat and death domain-containing protein 1 isoform X2

      Conserved Domains (3) summary
      COG4886
      Location:67 → 201
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:69 → 91
      LRR_RI; leucine-rich repeat [structural motif]
      cl14633
      Location:228 → 314
      DD; Death Domain Superfamily of protein-protein interaction domains

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006596.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      17343238..17384482 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038446198.1 → XP_038302126.1  leucine-rich repeat and death domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0N6K7, A0A8C0TAJ6, A0A8P0N525
      Conserved Domains (3) summary
      PLN00113
      Location:160 → 712
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:504 → 526
      LRR_RI; leucine-rich repeat [structural motif]
      cl14633
      Location:778 → 864
      DD; Death Domain Superfamily of protein-protein interaction domains

    2. XM_038446204.1 → XP_038302132.1  leucine-rich repeat and death domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0N6K7, A0A8C0TAJ6, A0A8P0N525
      Conserved Domains (3) summary
      PLN00113
      Location:160 → 712
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:504 → 526
      LRR_RI; leucine-rich repeat [structural motif]
      cl14633
      Location:778 → 864
      DD; Death Domain Superfamily of protein-protein interaction domains

    3. XM_038446217.1 → XP_038302145.1  leucine-rich repeat and death domain-containing protein 1 isoform X3

      Conserved Domains (3) summary
      COG4886
      Location:2 → 98
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00031
      Location:15 → 37
      LRR_1; leucine-rich repeat [structural motif]
      cl14633
      Location:125 → 211
      DD; Death Domain Superfamily of protein-protein interaction domains

    4. XM_038446213.1 → XP_038302141.1  leucine-rich repeat and death domain-containing protein 1 isoform X2

      Conserved Domains (3) summary
      COG4886
      Location:67 → 201
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:69 → 91
      LRR_RI; leucine-rich repeat [structural motif]
      cl14633
      Location:228 → 314
      DD; Death Domain Superfamily of protein-protein interaction domains
    Nucleotide Protein
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