osd-2014 metagenomic assembly (ID 417916) - BioProject

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Accession: PRJEB22092 ID: 417916

osd-2014 metagenomic assembly

EMG produced TPA metagenomics assembly of the Ocean Sampling Day (OSD) 2014: AUTHORITY-RAW amplicon and metagenome sequencing study from the June solstice in the year 2014 (osd-2014) data set

The osd-2014 Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set, PRJEB8682. This project includes samples from the following biomes : Marine

Accession	PRJEB22092
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell A et al., "EBI metagenomics in 2016--an expanding and evolving resource for the analysis and archiving of metagenomic data.", Nucleic Acids Res, 2016 Jan 4;44(D1):D595-603
Submission	Registration date: 10-Nov-2017 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1733
WGS master	60
Publications
PubMed	1
PMC	1
Other datasets
BioSample	60
Assembly	60

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

60
60

Assembly	WGS	BioSample	Taxonomy
GCA_963967225.1	CAXABU000000000	SAMEA115324297	Candidatus Pelagibacter ubique
GCA_963966735.1	CAXABR000000000	SAMEA115324305	Lentibacter algarum
GCA_963967245.1	CAXACN000000000	SAMEA115324257	Marivita lacus
GCA_963966795.1	CAXABJ000000000	SAMEA115324286	uncultured Alphaproteobacteria bacterium
GCA_963966755.1	CAXABF000000000	SAMEA115324259	uncultured Alphaproteobacteria bacterium
GCA_963967305.1	CAXACB000000000	SAMEA115324287	uncultured Alphaproteobacteria bacterium
GCA_963966775.1	CAXAAH000000000	SAMEA115324296	uncultured Alphaproteobacteria bacterium
GCA_963966945.1	CAXAAY000000000	SAMEA115324270	uncultured Amylibacter sp.
GCA_963967115.1	CAXABS000000000	SAMEA115324269	uncultured Aquiluna sp.
GCA_963966865.1	CAXAAZ000000000	SAMEA115324253	uncultured Candidatus Poseidoniales archaeon
GCA_963967175.1	CAXABZ000000000	SAMEA115324299	uncultured Candidatus Poseidoniales archaeon
GCA_963966875.1	CAXAAK000000000	SAMEA115324292	uncultured Candidatus Poseidoniales archaeon
GCA_963966975.1	CAXAAS000000000	SAMEA115324275	uncultured Cellulomonadaceae bacterium
GCA_963967075.1	CAXAAG000000000	SAMEA115324267	uncultured Cellvibrionales bacterium
GCA_963967265.1	CAXACL000000000	SAMEA115324293	uncultured Cellvibrionales bacterium
GCA_963967035.1	CAXAAU000000000	SAMEA115324285	uncultured Cellvibrionales bacterium
GCA_963967235.1	CAXACI000000000	SAMEA115324301	uncultured Cryomorphaceae bacterium
GCA_963966815.1	CAXAAW000000000	SAMEA115324278	uncultured Cryomorphaceae bacterium
GCA_963966825.1	CAXAAX000000000	SAMEA115324295	uncultured Cryomorphaceae bacterium
GCA_963966895.1	CAXABP000000000	SAMEA115324304	uncultured Cryomorphaceae bacterium
GCA_963966885.1	CAXAAO000000000	SAMEA115324261	uncultured Flavobacteriaceae bacterium
GCA_963966985.1	CAXABC000000000	SAMEA115324274	uncultured Flavobacteriaceae bacterium
GCA_963966715.1	CAXABB000000000	SAMEA115324254	uncultured Flavobacteriales bacterium
GCA_963966805.1	CAXABG000000000	SAMEA115324273	uncultured Gammaproteobacteria bacterium
GCA_963967145.1	CAXABW000000000	SAMEA115324288	uncultured Gammaproteobacteria bacterium
GCA_963967105.1	CAXABL000000000	SAMEA115324276	uncultured Gammaproteobacteria bacterium
GCA_963966915.1	CAXABQ000000000	SAMEA115324262	uncultured Gammaproteobacteria bacterium
GCA_963967295.1	CAXACM000000000	SAMEA115324264	uncultured Glaciecola sp.
GCA_963967275.1	CAXACK000000000	SAMEA115324300	uncultured Glaciecola sp.
GCA_963966855.1	CAXABO000000000	SAMEA115324268	uncultured Halieaceae bacterium
GCA_963966765.1	CAXAAR000000000	SAMEA115324263	uncultured Halieaceae bacterium
GCA_963967215.1	CAXACJ000000000	SAMEA115324291	uncultured Loktanella sp.
GCA_963966835.1	CAXABI000000000	SAMEA115324272	uncultured Maricaulis sp.
GCA_963967285.1	CAXACA000000000	SAMEA115324251	uncultured Micrococcales bacterium
GCA_963967165.1	CAXABY000000000	SAMEA115324271	uncultured Oceanospirillales bacterium
GCA_963967055.1	CAXAAJ000000000	SAMEA115324266	uncultured Oceanospirillales bacterium
GCA_963967205.1	CAXACH000000000	SAMEA115324302	uncultured Opitutales bacterium
GCA_963967155.1	CAXACC000000000	SAMEA115324249	uncultured Opitutia bacterium
GCA_963966845.1	CAXAAM000000000	SAMEA115324279	uncultured Planktomarina sp.
GCA_963966745.1	CAXAAP000000000	SAMEA115324303	uncultured Polaribacter sp.
GCA_963967065.1	CAXAAQ000000000	SAMEA115324294	uncultured Prochlorococcus sp.
GCA_963967255.1	CAXABV000000000	SAMEA115324283	uncultured Pseudorhodobacter sp.
GCA_963967095.1	CAXAAI000000000	SAMEA115324290	uncultured Psychrobacter sp.
GCA_963967185.1	CAXABX000000000	SAMEA115324252	uncultured Psychrobacter sp.
GCA_963967085.1	CAXAAV000000000	SAMEA115324258	uncultured Psychrobacter sp.
GCA_963966905.1	CAXABA000000000	SAMEA115324255	uncultured Rhodobacterales bacterium
GCA_963967125.1	CAXACF000000000	SAMEA115324256	uncultured Rhodobacterales bacterium
GCA_963967025.1	CAXABK000000000	SAMEA115324280	uncultured Rhodobacterales bacterium
GCA_963967135.1	CAXACE000000000	SAMEA115324284	uncultured Rhodobacterales bacterium
GCA_963966925.1	CAXABH000000000	SAMEA115324265	uncultured Rhodobacterales bacterium
GCA_963967195.1	CAXACD000000000	SAMEA115324246	uncultured Rhodobacterales bacterium
GCA_963966785.1	CAXABN000000000	SAMEA115324260	uncultured Rhodobacterales bacterium
GCA_963967005.1	CAXABT000000000	SAMEA115324248	uncultured Sphingomonadales bacterium
GCA_963966995.1	CAXAAL000000000	SAMEA115324281	uncultured Synechococcus sp.
GCA_963967015.1	CAXABE000000000	SAMEA115324289	uncultured Synechococcus sp.
GCA_963966935.1	CAXABD000000000	SAMEA115324250	uncultured Synechococcus sp.
GCA_963966725.1	CAXACG000000000	SAMEA115324247	uncultured Verrucomicrobiales bacterium
GCA_963966965.1	CAXAAT000000000	SAMEA115324277	uncultured Verrucomicrobiales bacterium
GCA_963966955.1	CAXABM000000000	SAMEA115324282	uncultured bacterium
GCA_963967045.1	CAXAAN000000000	SAMEA115324298	uncultured bacterium

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osd-2014 metagenomic assembly

EMG produced TPA metagenomics assembly of the Ocean Sampling Day (OSD) 2014: AUTHORITY-RAW amplicon and metagenome sequencing study from the June solstice in the year 2014 (osd-2014) data set

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