GSE34919[Accession] - GEO DataSets

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Items: 6

Select item 2000349191.

Genome-wide Definition of the SigF Regulon in Mycobacterium tuberculosis (ChIP-chip)

(Submitter supplied) The genome wide ChIP-on-chip analysis to identify the DNA binding sites for the M.tuberculosis sigma factor Rv3286c (SigF)

Organism:: Mycobacterium tuberculosis; Mycobacterium tuberculosis H37Rv

Type:: Genome binding/occupancy profiling by genome tiling array

Platform:: GPL15091
4 Samples

Download data: TXT

Series

Accession:: GSE34919

ID:: 200034919

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000150912.

EPFL 4x44k OGT MTB microarray (both strands condense version)

(Submitter supplied) The forward and reverse strand is combined on this version of the platform. The supplementary files contain the oligonucleotide sequence for both strands and the array layout. Protocol: The OGT microarrays consist of 44000 60mer oligonucleotide probes designed to hybridise throughout the M.tuberculosis genomic DNA. (http://www.ogt.co.uk/)

Organism:: Mycobacterium tuberculosis

2 Series
4 Samples

Download data: GAL, TXT

Platform

Accession:: GPL15091

ID:: 100015091

Select item 3008575043.

SigF_chip_on_chip_4

Organism:: Mycobacterium tuberculosis H37Rv

Source name:: SigF chip DNA from H37Rv(ΔrsbW/sigF)::pMY769 with P-IA (channel 1) SigF chip DNA from H37Rv(ΔrsbW/sigF)::pMYsigF with P-IA (channel 2)

Platform:: GPL15091
Series:: GSE34919 GSE35080

Download data: TXT

Sample

Accession:: GSM857504

ID:: 300857504

Select item 3008575034.

SigF_chip_on_chip_3

Organism:: Mycobacterium tuberculosis H37Rv

Source name:: SigF chip DNA from H37Rv(ΔrsbW/sigF)::pMY769 with P-IA (channel 1) SigF chip DNA from H37Rv(ΔrsbW/sigF)::pMYsigF with P-IA (channel 2)

Platform:: GPL15091
Series:: GSE34919 GSE35080

Download data: TXT

Sample

Accession:: GSM857503

ID:: 300857503

Select item 3008575025.

SigF_chip_on_chip_2

Organism:: Mycobacterium tuberculosis H37Rv

Source name:: SigF chip DNA from H37Rv(ΔrsbW/sigF)::pMY769 with P-IA (channel 1) SigF chip DNA from H37Rv(ΔrsbW/sigF)::pMYsigF with P-IA (channel 2)

Platform:: GPL15091
Series:: GSE34919 GSE35080

Download data: TXT

Sample

Accession:: GSM857502

ID:: 300857502

Select item 3008575016.

SigF_chip_on_chip_1

Organism:: Mycobacterium tuberculosis H37Rv

Source name:: SigF chip DNA from H37Rv(ΔrsbW/sigF)::pMY769 with P-IA (channel 1) SigF chip DNA from H37Rv(ΔrsbW/sigF)::pMYsigF with P-IA (channel 2)