|
| Status |
Public on Jan 20, 2012 |
| Title |
Genome-wide Definition of the SigF Regulon in Mycobacterium tuberculosis (ChIP-chip) |
| Platform organism |
Mycobacterium tuberculosis |
| Sample organism |
Mycobacterium tuberculosis H37Rv |
| Experiment type |
Genome binding/occupancy profiling by genome tiling array
|
| Summary |
The genome wide ChIP-on-chip analysis to identify the DNA binding sites for the M.tuberculosis sigma factor Rv3286c (SigF)
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| Overall design |
SigF binding sites were determined by microarray analysis of anti-sigF immunoprecipitated DNA from H37Rv(ΔrsbW/sigF)::pmySigF compared to H37Rv(ΔrsbW/sigF)::pMY769 (both cultured with pristinamycin for 3 days). 4 biological replicates were performed.
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| |
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| Contributor(s) |
Hartkoorn RC, Sala C, Uplekar S, Busso P, Rougemont J, Cole ST |
| Citation(s) |
22307756 |
| |
| Submission date |
Jan 06, 2012 |
| Last update date |
Apr 25, 2012 |
| Contact name |
Ruben C Hartkoorn |
| E-mail(s) |
[email protected]
|
| Organization name |
EPFL
|
| Department |
GHI/SV
|
| Lab |
UPCOL
|
| Street address |
SV 3533 (Bâtiment SV) Station 19
|
| City |
Lausanne |
| State/province |
Vaud |
| ZIP/Postal code |
CH-1015 |
| Country |
Switzerland |
| |
|
| Platforms (1) |
| GPL15091 |
EPFL 4x44k OGT MTB microarray (both strands condense version) |
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| Samples (4)
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| This SubSeries is part of SuperSeries: |
| GSE35080 |
Genome-wide Definition of the SigF Regulon in Mycobacterium tuberculosis |
|
| Relations |
| BioProject |
PRJNA156245 |
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