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Platform GPL15091 Query DataSets for GPL15091
Status Public on Jan 20, 2012
Title EPFL 4x44k OGT MTB microarray (both strands condense version)
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Mycobacterium tuberculosis
Manufacturer OGT
Manufacture protocol The OGT microarrays consist of 44000 60mer oligonucleotide probes designed to hybridise throughout the M.tuberculosis genomic DNA. (http://www.ogt.co.uk/)
Support glass
 
Description The forward and reverse strand is combined on this version of the platform. The supplementary files contain the oligonucleotide sequence for both strands and the array layout.
 
Contributor(s) Cole ST, Sala C, Hartkoorn RC, Uplekar S, Rougemont J
Submission date Jan 05, 2012
Last update date Jan 20, 2012
Contact name Ruben C Hartkoorn
E-mail(s) [email protected]
Organization name EPFL
Department GHI/SV
Lab UPCOL
Street address SV 3533 (Bâtiment SV) Station 19
City Lausanne
State/province Vaud
ZIP/Postal code CH-1015
Country Switzerland
 
Samples (4) GSM857501, GSM857502, GSM857503, GSM857504
Series (2)
GSE34919 Genome-wide Definition of the SigF Regulon in Mycobacterium tuberculosis (ChIP-chip)
GSE35080 Genome-wide Definition of the SigF Regulon in Mycobacterium tuberculosis

Data table header descriptions
ID
GENOME_ACC
RANGE_START
RANGE_END
SPOT_ID

Data table
ID GENOME_ACC RANGE_START RANGE_END SPOT_ID
CGH_AE000516_1340087_1342106_s_a_PS0-60-1596 AE000516 1340087 1342106 unmapped
CGH_AE000516_1467823_1469317_s_a_PS0-60-1 AE000516 1467823 1469317 unmapped
CGH_AE000516_1480511_1482106_s_a_PS0-60-1230 AE000516 1480511 1482106 unmapped
CGH_AE000516_1480511_1482106_s_a_PS0-60-1436 AE000516 1480511 1482106 unmapped
CGH_AE000516_1480511_1482106_s_a_PS0-60-968 AE000516 1480511 1482106 unmapped
CGH_AE000516_1533876_1534870_s_a_PS0-60-158 AE000516 1533876 1534870 unmapped
CGH_AE000516_1533876_1534870_s_a_PS0-60-658 AE000516 1533876 1534870 unmapped
CGH_AE000516_1533876_1534870_s_a_PS0-60-737 AE000516 1533876 1534870 unmapped
CGH_AE000516_1618462_1619039_s_a_PS0-60-46 AE000516 1618462 1619039 unmapped
CGH_AE000516_1633788_1634843_s_a_PS0-60-113 AE000516 1633788 1634843 unmapped
CGH_AE000516_1993795_1995915_s_a_PS0-60-1259 AE000516 1993795 1995915 unmapped
CGH_AE000516_2160394_2160955_s_a_PS0-60-175 AE000516 2160394 2160955 unmapped
CGH_AE000516_2160394_2160955_s_a_PS0-60-355 AE000516 2160394 2160955 unmapped
CGH_AE000516_2161633_2162069_s_a_PS0-60-11 AE000516 2161633 2162069 unmapped
CGH_AE000516_2161633_2162069_s_a_PS0-60-254 AE000516 2161633 2162069 unmapped
CGH_AE000516_2301637_2302638_s_a_PS0-60-83 AE000516 2301637 2302638 unmapped
CGH_AE000516_2331533_2332121_s_a_PS0-60-188 AE000516 2331533 2332121 unmapped
CGH_AE000516_2331533_2332121_s_a_PS0-60-283 AE000516 2331533 2332121 unmapped
CGH_AE000516_2331533_2332121_s_a_PS0-60-529 AE000516 2331533 2332121 unmapped
CGH_AE000516_2628926_2631117_s_a_PS0-60-1270 AE000516 2628926 2631117 unmapped

Total number of rows: 20702

Table truncated, full table size 1560 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL15091_0060_019354.gal.gz 2.6 Mb (ftp)(http) GAL
GPL15091_oligosequence_both_strands.txt.gz 1.5 Mb (ftp)(http) TXT

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