GSM1122567[Accession] - GEO DataSets

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Items: 3

Select item 2000460501.

Gene expression in Arabidopsis ddm1 mutants with high levels of Transposable Element activity

(Submitter supplied) Background: Transposable elements are known to influence the regulation of some genes. We aimed to determine which genes show altered gene expression when transposable elements are epigenetically activated. Results: We find over 2000 genes with altered steady-state expression levels in ddm1 mutants. Some of these genes are influenced by neighboring transposable element fragments, while other genes are targeted by transposable element derived 21 nucleotide siRNAs. more...

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array

Platform:: GPL198
6 Samples

Download data: CEL

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Accession:: GSE46050

ID:: 200046050

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000001982.

[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 07, 2012: annotation table updated with netaffx build 32 July 01, 2016: annotation table updated with netaffx build 35 Protocol: see manufacturer's web site The current release has 22810 entries and was indexed 26-Jun-2003. more...