Similar studies for GEO DataSets (Select 200002009) - GEO DataSets

Select item 2000020091.

Cross species comparison of expression patterns

(Submitter supplied) Comparison of expression in liver samples of human, chimp, orang and rhesus, by using a novel multi-species cDNA array Keywords: other

Organism:: Pan troglodytes; Pongo pygmaeus; Macaca mulatta; Homo sapiens

Type:: Expression profiling by array

Platform:: GPL1714
16 Samples

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Series

Accession:: GSE2009

ID:: 200002009

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Select item 2000025692.

Primate Comparison Study

(Submitter supplied) Comparing different primates to Human; treated vs.untreated Keywords: other

Organism:: Macaca mulatta; Homo sapiens; Pan troglodytes; Pongo pygmaeus

Type:: Expression profiling by array

Platform:: GPL1714
80 Samples

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Series

Accession:: GSE2569

ID:: 200002569

Select item 2000026343.

Comparison of human and non-human primate gene expression profiles

(Submitter supplied) Gene expression profiling is an important tool in the development of medical countermeasures against chemical warfare agents (CWAs). Non-human primates (NHPs), specifically the rhesus macaque (Macaca mulatta), the cynomologus macaque (Macaca fascicularis) and the African green monkey (Chlorocebus aethiops), are vital models in the development of CWA prophylactics, therapeutics, and diagnostics. However, gene expression profiling of these NHPs is complicated by the fact their genomes are not completely sequenced, and that no commercially available oligonucleotide microarrays (genechips) exist. more...

Organism:: Macaca fascicularis; Chlorocebus aethiops; Homo sapiens; Macaca mulatta

Type:: Expression profiling by array

Platform:: GPL570
17 Samples

Download data: CEL, CHP, EXP, RPT

Series

Accession:: GSE2634

ID:: 200002634

Select item 2000034064.

Expression patterns in stress conditions of 4 closely related yeast species from the Saccharomyces sensu stricto complex

(Submitter supplied) We characterize the genome-wide transcription response of four related yeast species and two strains to equivalent environmental stresses. Keywords: Comparative analysis of gene expression across species.

Organism:: Saccharomyces paradoxus; Saccharomyces cerevisiae; Saccharomyces kudriavzevii; Saccharomyces mikatae

Type:: Expression profiling by array

Dataset:: GDS2910
Platform:: GPL2910
191 Samples

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Series

Accession:: GSE3406

ID:: 200003406

Select item 29105.

Interspecies variations in response to environmental stresses: time course

Analysis of four closely related yeast species subjected to various durations of one of several environmental stresses. Results provide insight into the mechanisms driving the evolution of gene expression.

Organism:: Saccharomyces cerevisiae; Saccharomyces paradoxus; Saccharomyces kudriavzevii; Saccharomyces mikatae

Type:: Expression profiling by array, log2 ratio, 4 species, 2 strain, 5 stress, 10 time sets

Platform:: GPL2910
Series:: GSE3406
191 Samples

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DataSet

Accession:: GDS2910

ID:: 2910

Select item 2000075406.

Gene expression analysis of the human and chimpanzee brain

(Submitter supplied) The origin of humans was accompanied by the emergence of new behavioral and cognitive functions, including language and specialized forms of abstract representation. However, the molecular foundations of these human capabilities are poorly understood. Because of the extensive similarity between human and chimpanzee DNA sequences, it has been suggested that many of the key phenotypic differences between species result primarily from alterations in the regulation of genes rather than in their sequences. more...

Organism:: Homo sapiens; Pan troglodytes

Type:: Expression profiling by array

Dataset:: GDS2678
Platform:: GPL8300
37 Samples

Download data: CEL, CHP, EXP

Series

Accession:: GSE7540

ID:: 200007540

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Select item 26787.

Brain regions of humans and chimpanzees

Comparison of various human and chimpanzee brain regions. Results provide insight into the genetic basis of human specializations in brain organization and cognition.

Organism:: Pan troglodytes; Homo sapiens

Type:: Expression profiling by array, count, 2 species, 12 tissue sets

Platform:: GPL8300
Series:: GSE7540
37 Samples

Download data: CEL, CHP, EXP

DataSet

Accession:: GDS2678

ID:: 2678

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Select item 2000040648.

Gene expression of growing antler in Cervus elaphus

(Submitter supplied) The aim of the study is to characterize the gene expression of the growing antlers during their process of regeneration and fast growth Keywords: tissue type and state comparison

Organism:: Cervus elaphus; Homo sapiens

Type:: Expression profiling by array

Platform:: GPL570
4 Samples

Download data: CEL, EXP

Series

Accession:: GSE4064

ID:: 200004064

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Select item 2000069829.

Long Oligonucleotide Microarrays for African Green Monkey Gene Expression Profile Analysis

(Submitter supplied) Nonhuman primates including African Green Monkey (AGM) are important models for biomedical research. The information on monkey genomes is still limited and no versatile gene expression screening tool is available. We tested human whole genome microarrays for cross-species reactivity with AGM transcripts using both long oligonucleotide arrays (60-mer probes, Applied Biosystems-ABI) and short oligonucleotide arrays (25-mer, Affymetrix). more...

Organism:: Macaca mulatta; Homo sapiens; Chlorocebus sabaeus

Type:: Expression profiling by array

Platforms:: GPL2986 GPL1426 GPL570
14 Samples

Download data: CEL, EXP, TXT

Series

Accession:: GSE6982

ID:: 200006982

Select item 20000097510.

Heterogous hybridization experiment

(Submitter supplied) Fish and Chips: Expression Profiling in Non-traditional Model Systems Using a Cichlid Fish cDNA Microarray This series represents the 26 arrays that went into Renn et al 2004 (submitted January 16th), and one additional hybridization (GSM15240) that was not included in the publication analysis for statistical reasons. Keywords: other

Organism:: Salmo salar; Danio rerio; Xiphophorus; Haplochromis burtoni; Neolamprologus brichardi; Xenotilapia melanogenys; Poecilia reticulata; Oreochromis niloticus

Type:: Expression profiling by array

Platform:: GPL928
27 Samples

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Series

Accession:: GSE975

ID:: 200000975

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Select item 20000902811.

Extended Primate aCGH

(Submitter supplied) This set includes individuals from 10 different primate species whose genomic DNA was used in an array-based comparative genomic hybridization (aCGH)using human cDNA microarrays to detect gene copy number variation across 10 primate species. An organism part comparison experiment design type compares tissues, regions, organs within or between organisms. Keywords: organism_part_comparison_design, array CGH

Organism:: Homo sapiens; Macaca sp.; Papio hamadryas; Callithrix sp.; Hylobates sp.; Lemur sp.

Type:: Genome variation profiling by array

4 related Platforms
33 Samples

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Series

Accession:: GSE9028

ID:: 200009028

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Select item 20001262512.

Expression data for a study on cross-species hybridization on single-species microarrays

(Submitter supplied) Gene expression was examined in testis and brain tissue between two species (Xenopus laevis and Xenopus borealis) and their hybrid. Genomic DNA hybridizations of the microarray target and non-target species were used to select probes that are unbiased between species.

Organism:: Xenopus laevis; Xenopus muelleri; Xenopus laevis x Xenopus borealis; Xenopus borealis

Type:: Expression profiling by array; Genome variation profiling by array

Platform:: GPL1318
15 Samples

Download data: CEL, TXT

Series

Accession:: GSE12625

ID:: 200012625

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Select item 20001566613.

Using high-density exon arrays to profile gene expression in closely related species

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens; Macaca mulatta; Pan troglodytes

Type:: Expression profiling by array

Platforms:: GPL8444 GPL5175
15 Samples

Download data: CEL

Series

Accession:: GSE15666

ID:: 200015666

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Select item 20001566514.

Using high-density exon arrays to profile gene expression in closely related species (HJAY)

(Submitter supplied) Global comparisons of gene expression profiles between species provide significant insight into gene regulation, evolutionary processes, and disease mechanisms. In this work, we describe a flexible and intuitive approach for global expression profiling of closely related species, using high-density exon arrays designed for a single reference genome. The high-density probe coverage of exon arrays allows us to select the identical set of perfect-match probes for measuring expression levels of orthologous genes. more...