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Links from GEO DataSets

Items: 18

1.

Molecular profiling of cumulus cells and their correlation with pregnancy outcome: away from single gene marker and toward pathways analysis

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by array; Methylation profiling by genome tiling array
Platforms:
GPL13534 GPL10558
48 Samples
Download data: IDAT
Series
Accession:
GSE144665
ID:
200144665
2.

Molecular profiling of cumulus cells and their correlation with pregnancy outcome: away from single gene marker and toward pathways analysis [Methylation data]

(Submitter supplied) Worldwide the rate of infertility is on rise which put increasing pressure on assisted reproductive technology (ART) programs worldwide. Therefore it is important to increase the efficiency of ART. Toward this aim studies has been performed to find the best predictive biomarkers to choose the best germ cells for fertilization and the best embryo for transfer into uterus. However, across different studies no universal markers were found. more...
Organism:
Homo sapiens
Type:
Methylation profiling by genome tiling array
Platform:
GPL13534
24 Samples
Download data: IDAT, TXT
Series
Accession:
GSE144664
ID:
200144664
3.

Molecular profiling of cumulus cells and their correlation with pregnancy outcome: away from single gene marker and toward pathways analysis [Expression data]

(Submitter supplied) Worldwide the rate of infertility is on rise which put increasing pressure on assisted reproductive technology (ART) programs worldwide. Therefore it is important to increase the efficiency of ART. Toward this aim studies has been performed to find the best predictive biomarkers to choose the best germ cells for fertilization and the best embryo for transfer into uterus. However, across different studies no universal markers were found. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL10558
24 Samples
Download data: IDAT, TXT
Series
Accession:
GSE144516
ID:
200144516
4.

Differentiating factors of cumulus cells related to quality of the human oocyte

(Submitter supplied) Single embryo transfer (SET) is the most successful way to reduce the frequency of multiple pregnancies during in vitro fertilisation. However, selecting the embryo with the highest chances of pregnancy for SET remains a difficult challenge, since morphological and kinetics criteria provide poor prediction of both developmental and implantation ability. Partly through the expression of specific genes, the oocyte-cumulus interaction helps the oocyte to acquire its developmental competence. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL4133
92 Samples
Download data
Series
Accession:
GSE37277
ID:
200037277
5.

Differentiating factors of cumulus cells related to quality of the human oocyte [CadoretPart2]

(Submitter supplied) Our aim was to identify at the level of cumulus cells any genes related to oocyte developmental competence
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL4133
36 Samples
Download data: TXT
Series
Accession:
GSE37117
ID:
200037117
6.

Differentiating factors of cumulus cells related to quality of the human oocyte [CadoretPart3]

(Submitter supplied) Our aim was to identify at the level of cumulus cells any genes related to oocyte developmental competence
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL4133
24 Samples
Download data: TXT
Series
Accession:
GSE37116
ID:
200037116
7.

Differentiating factors of cumulus cells related to quality of the human oocyte [CadoretPart1]

(Submitter supplied) Our aim was to identify at the level of cumulus cells any genes related to oocyte developmental competence
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL4133
32 Samples
Download data: TXT
Series
Accession:
GSE37110
ID:
200037110
8.

Bovine cumulus cells transcriptome in relation with oocyte chromatin configuration of the germinal vesicle

(Submitter supplied) Gene expression analysis in cc from COCs with different chromatin configuration (GV0-3)
Organism:
Bos taurus
Type:
Expression profiling by array
Platform:
GPL13226
12 Samples
Download data: TXT
Series
Accession:
GSE79886
ID:
200079886
9.

Transcriptome analysis of FSH response in bovine cumulus cells

(Submitter supplied) Study the effect of recombinant human FSH supplementation in the in vitro maturation medium for an incubation of 6 hrs on the transcriptomics of bovine cumulus cells.
Organism:
Bos taurus
Type:
Expression profiling by array
Platform:
GPL13226
6 Samples
Download data: TXT
Series
Accession:
GSE67970
ID:
200067970
10.

Transcriptome analysis of bovine cumulus cells during first 6 hrs of in vitro maturation

(Submitter supplied) Study the effect of in vitro maturation system on the transcriptomics of bovine cumulus cells during incubation of first 6 hrs.
Organism:
Bos taurus
Type:
Expression profiling by array
Platform:
GPL13226
6 Samples
Download data: TXT
Series
Accession:
GSE67969
ID:
200067969
11.

Functional signaling and gene regulatory networks between the oocyte and the surrounding cumulus cells

(Submitter supplied) The maturation of an oocyte, the female gamete, during folliculogenesis is highly dependent on the molecular interaction with the somatic cells. Here we generated transcriptome data of single oocytes and the surrounding cumulus cells from antral follicles, and developed an analytical framework to unveil their inter-cellular communication. We identified hundreds of ligand-receptors pairs that can transduce paracrine signaling between oocyte and cumulus. more...
Organism:
Bos taurus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL19172
48 Samples
Download data: TXT
Series
Accession:
GSE99678
ID:
200099678
12.

Effect of low dose docosahexaenoic acid (DHA) on bovine cumulus cells during in vitro maturation

(Submitter supplied) In order to decipher the pathways of DHA via cumulus cells (CC) surrounding an oocytes, microarray hybridization of cumulus cells after 4h IVM in the presence or absence of 1µM DHA was performed.
Organism:
Bos taurus
Type:
Expression profiling by array
Platform:
GPL21724
8 Samples
Download data: TXT
Series
Accession:
GSE94338
ID:
200094338
13.

Bovine adult versus prepubertal cumulus cells

(Submitter supplied) The present study was undertaken to discover molecular markers in bovine cumulus cells predictive of oocyte competence and elucidate their functional significance. Differences in RNA transcript abundance in cumulus cells harvested from oocytes of adult versus prepubertal animals (model of poor oocyte quality) were identified by microarray analysis. Four genes of interest encoding for the lysosomal cysteine proteinases cathepsin B, S, K and Z and displaying greater transcript abundance in cumulus cells surrounding oocytes harvested from prepubertal animals were chosen for further investigation. more...
Organism:
Bos taurus
Type:
Expression profiling by array
Platform:
GPL325
8 Samples
Download data: TXT
Series
Accession:
GSE10819
ID:
200010819
14.

Expression data from human cumulus cells isolated from oocytes at MI and MII stages in polycystic ovary syndrome (PCOS) patients

(Submitter supplied) Polycystic ovary syndrome (PCOS) is a common endocrine and metabolic disorder that is characterized by increased circulating androgen levels, anovulatory infertility, and frequently, insulin resistance and hyperinsulinemia.The abnormity of oocyte nuclear maturity is the main reason for anovulatory infertility and pregnancy loss in PCOS patients.The bidirectional exchanges between oocyte and contiguous CCs are important for oocyte competence acquisition, early embryonic development and CC expansion.Gene expression profiles of CCs has been suggested to predict embryo development and pregnancy outcome. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL570
6 Samples
Download data: CEL
Series
Accession:
GSE40400
ID:
200040400
15.

Gene expression analysis of pig cumulus-oocyte complexes stimulated in vitro with follicle stimulating hormone or epidermal growth factor-like peptides

(Submitter supplied) Background: The gonadotropin-induced resumption of oocyte meiosis in preovulatory follicles is preceded by expression of epidermal growth factor (EGF)-like peptides, amphiregulin (AREG) and epiregulin (EREG), in mural granulosa and cumulus cells. Both the gonadotropins and the EGF-like peptides possess the capacity to stimulate resumption of oocyte meiosis in vitro via activation of a broad signaling network in cumulus cells. more...
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL7435
9 Samples
Download data: TXT
Series
Accession:
GSE64858
ID:
200064858
16.

Gene expression profile in human cumulus cells (CCs) during long-term in vitro culture

(Submitter supplied) In the ovarian follicle, maturation of the oocyte increases in the presence of somatic cells called cumulus cells (CCs). These cells form a direct barrier between the oocyte and external environment. Thanks to bidirectional communication, they have a direct impact on the oocyte, its quality and development potential. Understanding the genetic profile of CCs appears to be important in elucidating the physiology of oocytes. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL13667
8 Samples
Download data: CEL
Series
Accession:
GSE149033
ID:
200149033
17.

Molecular signature in human cumulus cells related to embryonic developmental potential

(Submitter supplied) The objective of the present study was to investigate gene expression profiles of human Cumulus cells isolated from oocytes at metaphase II stage, under controlled ovarian stimulation (COS) cycle and to evaluate the relationship of embryo quality with molecular signatures in Cumulus cells. This study has been performed by microarray analysis in order to identify potential biomarkers related to oocyte developmental potential. more...
Organism:
Homo sapiens
Type:
Expression profiling by array; Non-coding RNA profiling by array
Platform:
GPL15314
6 Samples
Download data: TXT
Series
Accession:
GSE54135
ID:
200054135
18.

Small RNA profiling of human cumulus cells and oocytes

(Submitter supplied) Cumulus cells are biologically distinct from other follicular cells and perform specialized roles, transmitting signals within the ovary and supporting oocyte maturation during follicular development. The bi-directional communication between the oocyte and the surrounding cumulus cells is crucial for the acquisition of oocyte competence. Using Illumina/deep-sequencing technology, we dissected the small RNAome of pooled human mature MII oocytes and cumulus cells.
Organism:
Homo sapiens
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL9115
2 Samples
Download data: TXT
Series
Accession:
GSE44792
ID:
200044792
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