GEO help: Mouse over screen elements for information.
Status
Public on May 31, 2011
Title
[HG-U219] Affymetrix Human Genome U219 Array
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Homo sapiens Manufacturer
Affymetrix
Manufacture protocol
see manufacturer's website
Submission date
May 31, 2011
Last update date
Mar 21, 2019
Organization
Affymetrix, Inc.
E-mail(s)
[email protected] , [email protected] Phone
888-362-2447
URL
http://www.affymetrix.com/index.affx Street address
City
Santa Clara
State/province
CA
ZIP/Postal code
95051
Country
USA
Samples (20079)
GSM747238 , GSM747239 , GSM747240 , GSM747241 , GSM747242 , GSM747243
GSM747244 ,
GSM747245 ,
GSM747246 ,
GSM747247 ,
GSM747248 ,
GSM747249 ,
GSM747250 ,
GSM747251 ,
GSM747252 ,
GSM747253 ,
GSM747254 ,
GSM747255 ,
GSM790415 ,
GSM790416 ,
GSM790417 ,
GSM790418 ,
GSM790419 ,
GSM790420 ,
GSM821293 ,
GSM821294 ,
GSM898483 ,
GSM898484 ,
GSM898485 ,
GSM898486 ,
GSM898487 ,
GSM898488 ,
GSM898489 ,
GSM898490 ,
GSM898491 ,
GSM898492 ,
GSM898493 ,
GSM898494 ,
GSM898495 ,
GSM898496 ,
GSM898497 ,
GSM898498 ,
GSM914133 ,
GSM914134 ,
GSM914135 ,
GSM914136 ,
GSM914137 ,
GSM914138 ,
GSM950396 ,
GSM950397 ,
GSM950398 ,
GSM950399 ,
GSM951036 ,
GSM951037 ,
GSM951038 ,
GSM951039 ,
GSM951040 ,
GSM951041 ,
GSM951042 ,
GSM951043 ,
GSM977836 ,
GSM977837 ,
GSM977838 ,
GSM977839 ,
GSM988116 ,
GSM988117 ,
GSM988118 ,
GSM988119 ,
GSM988120 ,
GSM988121 ,
GSM988122 ,
GSM988123 ,
GSM988124 ,
GSM988125 ,
GSM988126 ,
GSM988127 ,
GSM988128 ,
GSM988129 ,
GSM988130 ,
GSM988131 ,
GSM988132 ,
GSM988133 ,
GSM988134 ,
GSM988135 ,
GSM988136 ,
GSM988137 ,
GSM988138 ,
GSM988139 ,
GSM988140 ,
GSM988141 ,
GSM988142 ,
GSM988143 ,
GSM988144 ,
GSM988145 ,
GSM988146 ,
GSM988147 ,
GSM988148 ,
GSM988149 ,
GSM988150 ,
GSM988151 ,
GSM988152 ,
GSM988153 ,
GSM988154 ,
GSM988155 ,
GSM988156 ,
GSM988157 ,
GSM988158 ,
GSM988159 ,
GSM988160 ,
GSM988161 ,
GSM988162 ,
GSM988163 ,
GSM988164 ,
GSM988165 ,
GSM995990 ,
GSM995991 ,
GSM995992 ,
GSM995993 ,
GSM995994 ,
GSM995995 ,
GSM1022855 ,
GSM1022856 ,
GSM1022857 ,
GSM1022858 ,
GSM1022859 ,
GSM1024634 ,
GSM1024641 ,
GSM1024643 ,
GSM1024644 ,
GSM1024646 ,
GSM1024647 ,
GSM1024649 ,
GSM1024651 ,
GSM1024652 ,
GSM1024654 ,
GSM1024655 ,
GSM1024657 ,
GSM1024658 ,
GSM1024660 ,
GSM1024661 ,
GSM1024663 ,
GSM1024664 ,
GSM1024666 ,
GSM1024668 ,
GSM1024669 ,
GSM1032112 ,
GSM1032113 ,
GSM1032114 ,
GSM1032115 ,
GSM1036107 ,
GSM1036108 ,
GSM1036109 ,
GSM1036110 ,
GSM1036111 ,
GSM1036112 ,
GSM1063599 ,
GSM1063600 ,
GSM1063601 ,
GSM1063602 ,
GSM1063603 ,
GSM1063604 ,
GSM1063605 ,
GSM1063606 ,
GSM1063607 ,
GSM1063608 ,
GSM1063609 ,
GSM1063610 ,
GSM1063611 ,
GSM1063612 ,
GSM1063613 ,
GSM1063614 ,
GSM1063615 ,
GSM1063616 ,
GSM1063617 ,
GSM1063618 ,
GSM1063619 ,
GSM1063620 ,
GSM1063621 ,
GSM1063622 ,
GSM1063623 ,
GSM1063624 ,
GSM1063625 ,
GSM1063626 ,
GSM1063627 ,
GSM1063628 ,
GSM1063629 ,
GSM1063630 ,
GSM1063631 ,
GSM1063632 ,
GSM1063633 ,
GSM1063634 ,
GSM1063635 ,
GSM1063636 ,
GSM1063637 ,
GSM1063638 ,
GSM1063639 ,
GSM1063640 ,
GSM1063641 ,
GSM1063642 ,
GSM1063643 ,
GSM1063644 ,
GSM1063645 ,
GSM1063646 ,
GSM1063647 ,
GSM1063648 ,
GSM1063649 ,
GSM1063650 ,
GSM1063651 ,
GSM1063652 ,
GSM1063653 ,
GSM1063654 ,
GSM1063655 ,
GSM1063656 ,
GSM1063657 ,
GSM1063658 ,
GSM1063659 ,
GSM1063660 ,
GSM1063661 ,
GSM1063662 ,
GSM1063663 ,
GSM1063664 ,
GSM1063665 ,
GSM1063666 ,
GSM1063667 ,
GSM1063668 ,
GSM1063669 ,
GSM1063670 ,
GSM1063671 ,
GSM1063672 ,
GSM1063673 ,
GSM1063674 ,
GSM1063675 ,
GSM1063676 ,
GSM1063677 ,
GSM1063678 ,
GSM1063679 ,
GSM1063680 ,
GSM1063681 ,
GSM1063682 ,
GSM1063709 ,
GSM1063710 ,
GSM1063711 ,
GSM1063712 ,
GSM1063713 ,
GSM1063714 ,
GSM1063715 ,
GSM1063716 ,
GSM1063717 ,
GSM1063718 ,
GSM1063719 ,
GSM1063720 ,
GSM1063721 ,
GSM1063722 ,
GSM1063723 ,
GSM1063724 ,
GSM1063725 ,
GSM1063726 ,
GSM1063727 ,
GSM1063728 ,
GSM1063729 ,
GSM1063730 ,
GSM1063731 ,
GSM1063732 ,
GSM1063733 ,
GSM1063734 ,
GSM1063735 ,
GSM1063736 ,
GSM1063737 ,
GSM1063738 ,
GSM1063739 ,
GSM1063740 ,
GSM1063741 ,
GSM1063742 ,
GSM1063743 ,
GSM1063744 ,
GSM1063745 ,
GSM1063746 ,
GSM1063747 ,
GSM1063748 ,
GSM1063749 ,
GSM1063750 ,
GSM1063751 ,
GSM1063752 ,
GSM1063753 ,
GSM1063754 ,
GSM1063755 ,
GSM1063756 ,
GSM1063757 ,
GSM1063758 ,
GSM1063759 ,
GSM1063760 ,
GSM1063761 ,
GSM1063762 ,
GSM1063763 ,
GSM1063764 ,
GSM1063765 ,
GSM1063766 ,
GSM1063767 ,
GSM1063768 ,
GSM1063769 ,
GSM1063770 ,
GSM1063771 ,
GSM1063772 ,
GSM1063773 ,
GSM1063774 ,
GSM1063775 ,
GSM1063776 ,
GSM1063777 ,
GSM1063778 ,
GSM1063779 ,
GSM1063780 ,
GSM1063781 ,
GSM1063782 ,
GSM1063783 ,
GSM1063784 ,
GSM1063785 ,
GSM1063786 ,
GSM1063787 ,
GSM1063788 ,
GSM1063789 ,
GSM1063790 ,
GSM1063791 ,
GSM1063792 ,
GSM1063793 ,
GSM1063794 ,
GSM1063795 ,
GSM1063796 ,
GSM1063797 ,
GSM1063798 ,
GSM1063799 ,
GSM1063800 ,
GSM1063801 ,
GSM1063802 ,
GSM1063803 ,
GSM1063804 ,
GSM1063805 ,
GSM1063806 ,
GSM1063807 ,
GSM1063808 ,
GSM1063809 ,
GSM1063810 ,
GSM1063811 ,
GSM1063812 ,
GSM1063813 ,
GSM1063814 ,
GSM1063815 ,
GSM1063816 ,
GSM1063817 ,
GSM1063818 ,
GSM1063819 ,
GSM1063820 ,
GSM1063821 ,
GSM1063822 ,
GSM1063823 ,
GSM1063824 ,
GSM1063825 ,
GSM1063826 ,
GSM1063827 ,
GSM1063828 ,
GSM1063829 ,
GSM1063830 ,
GSM1063831 ,
GSM1063832 ,
GSM1063833 ,
GSM1063834 ,
GSM1063835 ,
GSM1063836 ,
GSM1063837 ,
GSM1063838 ,
GSM1063839 ,
GSM1063840 ,
GSM1063841 ,
GSM1063842 ,
GSM1063843 ,
GSM1063844 ,
GSM1063845 ,
GSM1063846 ,
GSM1063847 ,
GSM1063848 ,
GSM1063849 ,
GSM1063850 ,
GSM1063851 ,
GSM1063852 ,
GSM1063853 ,
GSM1063854 ,
GSM1063855 ,
GSM1063856 ,
GSM1063857 ,
GSM1063858 ,
GSM1063859 ,
GSM1063860 ,
GSM1063861 ,
GSM1063862 ,
GSM1063863 ,
GSM1063864 ,
GSM1063865 ,
GSM1063866 ,
GSM1063867 ,
GSM1063868 ,
GSM1063869 ,
GSM1063870 ,
GSM1063871 ,
GSM1063872 ,
GSM1063873 ,
GSM1063874 ,
GSM1063875 ,
GSM1063876 ,
GSM1063877 ,
GSM1063878 ,
GSM1063879 ,
GSM1063880 ,
GSM1063881 ,
GSM1063882 ,
GSM1063883 ,
GSM1063884 ,
GSM1063885 ,
GSM1063886 ,
GSM1063887 ,
GSM1063888 ,
GSM1063889 ,
GSM1063890 ,
GSM1063891 ,
GSM1063892 ,
GSM1063893 ,
GSM1063894 ,
GSM1063895 ,
GSM1063896 ,
GSM1063897 ,
GSM1063898 ,
GSM1063899 ,
GSM1063900 ,
GSM1063901 ,
GSM1063902 ,
GSM1063903 ,
GSM1063904 ,
GSM1063905 ,
GSM1063906 ,
GSM1063907 ,
GSM1063908 ,
GSM1063909 ,
GSM1063910 ,
GSM1063911 ,
GSM1063912 ,
GSM1063913 ,
GSM1063914 ,
GSM1063915 ,
GSM1063916 ,
GSM1063917 ,
GSM1063918 ,
GSM1063919 ,
GSM1063920 ,
GSM1063921 ,
GSM1063922 ,
GSM1063923 ,
GSM1063924 ,
GSM1063925 ,
GSM1063926 ,
GSM1063927 ,
GSM1063928 ,
GSM1063929 ,
GSM1063930 ,
GSM1063931 ,
GSM1063932 ,
GSM1063933 ,
GSM1063934 ,
GSM1063935 ,
GSM1063936 ,
GSM1063937 ,
GSM1063938 ,
GSM1063939 ,
GSM1063940 ,
GSM1063941 ,
GSM1063942 ,
GSM1063943 ,
GSM1063944 ,
GSM1063945 ,
GSM1063946 ,
GSM1063947 ,
GSM1063948 ,
GSM1063949 ,
GSM1063950 ,
GSM1063951 ,
GSM1063952 ,
GSM1063953 ,
GSM1063954 ,
GSM1063955 ,
GSM1063956 ,
GSM1063957 ,
GSM1063958 ,
GSM1063959 ,
GSM1063960 ,
GSM1063961 ,
GSM1063962 ,
GSM1063963 ,
GSM1063964 ,
GSM1063965 ,
GSM1063966 ,
GSM1063967 ,
GSM1063968 ,
GSM1063969 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (219)
GSE25504 Whole blood mRNA expression profiling of host molecular networks in neonatal sepsis
GSE30183 Expression profiling of MCF7 cells upon nutlin3a treatment
GSE30211 Gene expression changes during Type 1 diabetes pathogenesis
GSE31869 Very small embryonic-like stem cells purified from umbilical cord blood lack stem cell characteristics
GSE33171 Gene expression comparison between two human cancer cell Lines: Oral squamous cell carcinoma SASL1m and adenoid cystic carcinoma ACC2
GSE36678 Expression data SK-N-SH cells treated with risperidone
GSE37237 Extracellular purines promote the differentiation capacity of human bone marrow-derived mesenchymal stem cells
GSE38829 Expression data from MCF7 and MCF7-LTED cells treated with YC-1
GSE38866 Expression Data from siRae1 and siNT infected with VSV or mock infected
GSE39691 Expression data from a triple-negative BRCA1-mutated ortho-xenograft treated with sirolimus
GSE39694 Expression data from orthotopic tumors and the MCF7 and HCC1937 breast cancer cell lines
GSE40191 Small molecule activation of PKM in cancer cells induces serine auxotrophy
GSE40542 Proviral integration site for Moloney murine leukemia virus (PIM) kinases promote human T helper 1 cell differentiation
GSE41697 Microarray analysis of GFP-SAS cells treated with siAURKA and MLN8237
GSE41812 Gene expression profile of mutated and wild-type PMF CD34+ cells
GSE42078 Expression data of differentiated human erythroid cells with or without Tranylcypromine (TC) treatment
GSE43488 Genome-wide expression kinetics of children with Type 1 diabetes (T1D) -associated autoantibodies or progression towards clinical T1D, compared to healthy matched controls .
GSE43838 Gene expression profile in patients inoculated with E. coli 83972
GSE43886 Expression data profile of A498 cells treated with DRB or E. coli 83972
GSE43887 Expression data of host gene response to Escherichia coli 83972
GSE44076 Gene expression data from healthy, adjacent normal and tumor colon cells
GSE44272 The Long-HER Study
GSE45720 Beta-tubulin and Actin Filament-Associating Small GTPase GIMAP4 is Required for IFN-Ɣ Secretion During Early Human CD4+ T Cell Activation
GSE45745 Gene expression profiling in skeletal muscle before and after GBP surgery
GSE45747 Weight loss after gastric bypass surgery in human obesity induces promoter methylation
GSE46676 Potential capacity of aptamers to trigger immune activation in human blood
GSE47871 Antitumoral activity of acadesine and rituximab in MCL
GSE47916 Expression of four hESC lines in enzymatic and mechanic passaging methods
GSE47917 Genome alterations in human pluripotent stem cells as very early events highly dependent on cell passaging conditions
GSE47994 Tumor-infiltrating lymphocytes, prognosis and trastuzumab benefit in early-stage breast cancer patients from the FinHER trial
GSE49475 Transcriptomic analysis of human skin Langerhans cell and dermal dendritic cells stimulated in vitro with TNF-alpha and TSLP
GSE49995 Gene expression profiling and secretome analysis differentiate Adult-Derived Human Liver Stem/progenitor Cells and human hepatic stellate cells
GSE51044 Gamma-secretase inhibitor plus fludarabine in CLL
GSE51068 High-throughput expression profiling of OCI-Ly3 cell line upon treatment with a panel of 14 known drugs.
GSE51371 Sensitivity to proteasome inhibition and in vivo growth properties of MCL cells
GSE51699 Endogenous Intrahepatic Interferons and Association with IFN-free HCV Treatment Outcome
GSE51895 Histone deacetylase 7 role in B cell acute lymphoblastic leukemia and B cell lymphoma
GSE52921 Gene expression profile (GEP) of siRNA-JARID2 CD34+ cells
GSE53031 Gene expression profiling of human breast cancer during pregnancy
GSE53124 Migration and invasion of 5 glioblastoma cell lines
GSE53309 Comparative study of a mTOR inhibitor, a pan-PI3K inhibitor and a dual PI3K/mTOR inhibitor in MCL
GSE53471 Standard of hygiene and immune adaptation in newborn infants [113 cord blood RNA samples]
GSE53472 Standard of hygiene and immune adaptation in newborn infants [15 rehybridized/batch correction samples]
GSE53473 Standard of hygiene and immune adaptation in newborn infants
GSE53482 Integrative Analysis of Gene and miRNA expression profiles in Primary Myelofibrosis CD34+ cells
GSE53808 White Matter transcriptome in chronic alcoholism
GSE54158 Gene expression profiling of Follicular Lymphoma (FL) cultured in the presence or absence of the Follicular Dendritic Cell (FDC) line HK
GSE54720 DNA methylation changes at CpG and non-CpG sites are associated with development and clinical behavior in neuroblastoma [gene expression]
GSE54721 DNA methylation changes at CpG and non-CpG sites are associated with development and clinical behavior in neuroblastoma.
GSE55708 Reinforced STAT3 activity sustains self-renewal of human embryonic stem cells in a naive-like state
GSE55962 Systemic inflammatory response to smoking in chronic obstructive pulmonary disease: evidence of a gender effect
GSE56233 Microarray analysis of GFP-SAS cells treated with small interfering RNA (siRNA) specific for Akt1 (siAkt1)
GSE56741 Gene expression profile of collagen VI deficient human fibroblasts
GSE56960 Caloric-dose responsive genes in blood cells differentiate the metabolic status of obese men
GSE60298 Gene expression profile (GEP) of miR-486-3p overexpressing CD34+ HPCs
GSE60299 Gene expression profile (GEP) of myb-silenced CD34+ HPCs
GSE60301 MYB/miR4863p/MAF/ axis in hematopoietic progenitor cell fate decision
GSE60350 Expression Profiles of Responders versus Non-Responders with AML or MDS to the Novel Mitochondrial Inhibitor CPI-613
GSE60408 Expression profiles in 3 different B-cell lymphoma cell lines treated by 92 FDA approved compounds
GSE60673 Pharmacologic inhibition of the menin-MLL interaction blocks progression of MLL leukemia in vivo
GSE60729 Gene expression profile of HIF-1α silenced or non-silenced human DCs stimulated with A. fumigatus under normoxic or hypoxic conditions
GSE61120 Decreased expression of cell proliferation-related genes in clonally derived skin fibroblasts from children with Silver-Russell syndrome is independent of the degree of 11p15 ICR1 hypomethylation
GSE61164 FoxA supports breast cancer growth by regulating LIPG transcription and lipid metabolism
GSE62165 Prognostic relevance of molecular subtypes and master regulators in pancreatic ductal adenocarcinoma
GSE63659 Transcriptomic Changes in TGF-β1 Differentiated and PGE2 Dedifferentiated Myofibroblasts
GSE63898 DNA methylation-based prognosis and epidrivers in hepatocellular carcinoma
GSE64662 Gene expression following treatment with HDAC6 inhibitor C1A
GSE65074 Gene expression classifier in papillary thyroid carcinoma: validation and application of a classifier for prognostication
GSE65095 FinHER trial : Patients with human epidermal growth factor receptor 2 (HER2)–positive breast cancer
GSE65527 Gene expression after 24h Urolithin A incubation in LNCaP cells
GSE65682 Genome-wide blood transcriptional profiling in critically ill patients - MARS consortium
GSE66361 Analysis of the gene expression profile in cutaneous squamous cell carcinoma cells after EphB2 knockdown
GSE66368 EphB2 promotes progression of cutaneous squamous cell carcinoma
GSE67089 Analysis of mRNA profiles distinguishes proneural (PN) glioma stem cells (GSC) from mesenchymal (Mes) GSCs
GSE67185 Genome wide STAT3 RNAi expression profiling data from Thp,Th0 and Th17 cells
GSE67537 Pathway-based integrative analysis reveals a key role for the hexosamine biosynthetic pathway in castrate resistant prostate cancer with therapeutic implications
GSE68000 Transcriptome of human liver cells and culture-activated hepatic stellate cells
GSE68001 In vitro activation and reversion of human primary hepatic stellate cells
GSE68163 Gene predictors of response to bendamustine in CLL cells
GSE69050 Microarray analysis of NS-SV-AC cells treated with TNF-a
GSE69644 Microarray analysis of HK-2 cells treated with cisplatin
GSE69723 Gene expression profiles of human immature dendritic cells co-cultivated with Aspergillus fumigatus, Candida albicans and LPS for 6h
GSE69818 COPD lung tissue expression
GSE69844 Expression data for HepaRG cells treated with 34 different chemicals
GSE69845 Expression data for MCF7 cells treated with 34 different chemicals
GSE69849 Expression data for Ishikawa cells treated with 34 different chemicals
GSE69850 Expression data for HepG2 cells treated with 34 different chemicals
GSE69851 Human toxicology-relevant cell lines treated with three doses of 34 chemical compounds
GSE70353 Subcutaneous adipose tissue gene expression from men that are part of the METSIM study
GSE71078 Comparative expression analysis of BRCA1mosMe fibroblast vs. BRCA1wt fibroblasts
GSE71766 A Systems Approach to Understanding Human Rhinovirus and Influenza Virus Infection
GSE72497 Cell cycle-dependent reconfiguration of the DNA (hydroxy) methylome during terminal differentiation of human B cells into plasma cells [expression array]
GSE72498 Cell cycle-dependent reconfiguration of the DNA (hydroxy) methylome during terminal differentiation of human B cells into plasma cells
GSE73456 Expression data from UMUC3 cells transduced with non-targeted shRNA and shRNA specific to AGL
GSE73935 Expression data from A2780 cell line and wild type ovarian cancer cell line (with resistant sublines)
GSE74968 Gene expression after knocking down of c-Met in breast cancer brain metastatic cell lines
GSE75535 Gene expresssion profiles of cancer of the appendix
GSE77086 Hepatocyte-like cells
GSE77337 Lysophosphatidylcholines activate PPARδ and protect human skeletal muscle cells from lipotoxicity
GSE77969 Gene expression profiles of human immature dendritic cells after 12h of co-cultivation with Aspergillus fumigatus, Candida albicans and LPS
GSE79255 Gene-expression profiles after siRNA knockdown and overexpression of bromodomian containing 1 (BRD1) in HEK293T cells
GSE79433 Compare gene expression difference between PC9 and MTAC-P
GSE79625 Overexpression of LMO2 causes aberrant human T-cell development in vivo by three potentially distinct cellular mechanisms
GSE80373 Spheroid growth in ovarian cancer promotes gene expression involved in epithelial-mesenchymal transition, stem cell promotion, and multiple stress responses
GSE80599 Expression data from human patients with slow or rapid Parkinson's Disease progression
GSE80805 Microarray analysis of minor salivary glands from patients with primary Sjögren’s syndrome (SS) or non-SS
GSE81527 IRAK4_hPBMC_stimulus_compound_exp3
GSE83500 Expression data from aortic wall between myocardial infarction (MI) and non-MI group
GSE83578 Sex-specific Variation in Signaling Pathways and Gene Expression Patterns in Human Leukocytes in Response to Endotoxin and Exercise
GSE84921 Gene expression profiles of human immature dendritic cells and macrophages after 6h of co-cultivation with Aspergillus fumigatus and platelet rich plasma
GSE85190 Gene expression profile (GEP) of MAF-overexpressing CD34+ hematopoietic progenitor cells (HPCs)
GSE85250 Gene expression profile (GEP) of CD34+ cells overexpressing miR-494-3p
GSE85274 IGF2 is an epi-driver and therapeutic target in hepatocellular carcinoma
GSE85916 Patients with human resected pancreatic cancer
GSE86880 Expression data from MCF7 cells treated with RITA or Nutlin
GSE87300 Human intervention study to assess the effects of supplementation with olive leaf extract on peripheral blood mononuclear cell gene expression
GSE87403 The BET bromodomain inhibitor CPI203 improves lenalidomide activity in in vitro and in vivo models of multiple myeloma by synergistic blockade of Ikaros and c-Myc signaling
GSE87610 Gene expression of L3 and L5 pyramidal neurons in the DLPFC comparing schizophrenia from bipolar major depressive disorders and unaffected subjects.
GSE89156 Gene expression profile (GEP) of miR-34a-5p-overexpressing CD34+ HPCs
GSE89793 Loss of the Inhibitory Immune Checkpoint CD85j/LILRB1 on Malignant Plasma Cells Contributes to Immune Escape in Multiple Myeloma
GSE90525 GENERATION OF HEPATIC STELLATE CELLS BY DIRECTED DIFFERENTIATION OF HUMAN PLURIPOTENT STEM CELLS
GSE93335 Fresh-Frozen samples profiled on HG-U219 array with Nugen's Ovation® FFPE WTA System and EncoreTM Biotin Module [dataset 3]
GSE93336 FFPE samples profiled on HG-U219 array with Nugen's Ovation® FFPE WTA System and EncoreTM Biotin Module
GSE93337 FFPE samples profiled on HG-U219 array with Affymetrix's SensationPlusTM FFPE Amplification and 3'IVT Labeling kit
GSE93338 Feasibility of Developing Reliable Gene Expression Modules from FFPE Derived RNA Profiled on Affymetrix Arrays
GSE93577 Gene expression of L3 parvalbumin neurons in the DLPFC comparing schizophrenia with unaffected subjects
GSE94328 The BTK Inhibitor CC-292 shows activity in Mantle Cell Lymphoma and synergizes with Lenalidomide and NIK Inhibitors depending on NFκB mutational status
GSE94397 Transcriptome profiles of liver biopsy tissues from sever alcoholic hepatitis patients (derivation cohort)
GSE94399 Transcriptome profiles of liver biopsy tissues from sever alcoholic hepatitis patients (validation cohort, Brussels)
GSE94417 An integrative transcriptomic and clinical score for mortality prediction in severe alcoholic hepatitis treated with corticosteroids
GSE97581 Gene Expression Profile (GEP) of Cytokine-Induced Killer (CIK) cells
GSE97807 Gene expression profile (GEP) of CALR-overexpressingCD34+ cells
GSE97808 Gene expression profile (GEP) of CALRsiRNA CD34+ cells
GSE97809 Gene expression profile (GEP) of CALR-overexpressing CD34+ cells and CALR-silenced CD34+ cells
GSE98902 Effect of Analytic Treatment Interruption of Antiretroviral Therapy on HIV Reservoirs and Immunological Parameters
GSE98905 The BET bromodomain inhibitor CPI203 overcomes resistance to ABT-199 (venetoclax) by downregulation of BFL-1/A1 in in vitro and in vivo models of MYC+/BCL2+ double hit lymphoma
GSE100901 Whole transcriptome analysis reveals a pro-inflammatory profile of ductular reaction cells in AH.
GSE102466 BMS_SLE_cytotoxicity_study
GSE102900 Calreticulin Ins5 and Del52 mutations impair unfolded protein and oxidative stress responses in hematopoietic cells
GSE103174 Expression data from lung tissue in mild-moderate COPD
GSE103176 Gene and miRNA expression profiles in Polycythemia Vera and Essential Thrombocythemia according to CALR and JAK2 mutations
GSE103237 Gene and miRNA expression profiles in Polycythemia Vera and Essential Thrombocythemia according to CALR and JAK2 mutations [GEP]
GSE103464 Gene expression profile (GEP) of miR-382-5p-overexpressing CD34+ cells
GSE103580 Transcriptome profiles of liver biopsy tissues from patients with various stages of alcoholic liver disease
GSE107624 Global Transcriptome Analysis during Mucociliary Differentiation of Human Nasal Polyp/Nasal Mucosa Basal Stem/Progenitor Cells
GSE108685 Genome-wide blood transcriptional profiling in human endotoxemia given human adipose-derived mesenchymal stem cells
GSE110169 BMS_TRD_SLE_RA_WB_study
GSE111122 SOX7 Target Genes and their Contribution to its Tumor Suppressive Function
GSE112660 The effect of circadian rhythm on gene expression in human skin
GSE114414 Gene expression profile (GEP) of K562 cells expressing wtCALR, CALRins5 and CALRdel52
GSE121297 Rigidity and inflammatory responses of interconnected endothelial cells are stimulated by rhodocetin-αβ via the neuropilin-1-MET-axis
GSE124203 Generating automated kidney transplant biopsy reports combining molecular measurements with ensembles of machine learning classifiers
GSE125349 MCL cel lines upon OMP-52M51 treatment
GSE128557 Gene expression profile in patients inoculated with Escherichia coli 83972
GSE129919 Gene expression profile in human ovarian granulosa cells during long-term in vitro culture
GSE130918 Effect of Idelalisib in follicular lymphoma monocultures and cocultured with follicular dendritic cells (FDC)
GSE131938 Disrupted mitochondrial function in aged human dermal fibroblasts
GSE132305 Molecular classification and therapeutic targets in extrahepatic cholangiocarcinoma
GSE133277 Expression data from rosmarinic acid-treated human amnion epithelial cells (hAECs)
GSE133616 Analysis of transcriptome, selected intracellular signaling pathways, proliferation and apoptosis of LNCaP cells exposed to high leptin concentration
GSE135501 Expression data of human peripheral blood leukocytes
GSE137061 Expression data from Verbenalin-treated human amnion epithelial cells (hAECs)
GSE137900 Expression data from isolated endothelial cells from glioblastoma and normal brain cultured as monolayer on gelatin
GSE137901 Expression data from isolated endothelial cells from glioblastoma and normal brain cultured on Matrigel
GSE137902 Expression data from isolated endothelial cells from glioblastoma and normal brain cultured as monolayer on gelatin and on Matrigel
GSE138587 Target genes of miR-361-3p in human oral squamous cell carcinoma cells, GFP-SAS
GSE139300 The effect of circadian rhythm on gene expression in human skin II
GSE139301 The effect of circadian rhythm on gene expression in human skin III
GSE139305 The effect of circadian rhythm on gene expression in human skin.
GSE139602 Molecular characterization of chronic liver disease dynamics: from liver fibrosis to acute-on-chronic liver failure
GSE140996 Expression data from Ovarian cancer wild type cells (W1) and cells resisted to Cisplatin (W1CR)
GSE141801 Contribution of mTOR and PTEN to Radioresistance in Sporadic and NF2-Associated Vestibular Schwannomas: A Microarray and Pathway Analysis.
GSE144095 Expression data from JVM13 cells with cyclin D1 exogenous overexpression
GSE145120 Gene expression data of different SSc subsets
GSE145974 Global transcriptome analysis identifies a signature for early disseminated Lyme disease and its resolution
GSE147211 Macrophage contribution to follicular lymphoma pathogenesis: CSF-1R as a novel prognostic factor and therapeutic target
GSE148160 Expression data from Luteolin-treated human Neural Stem Cells (hNSCs)
GSE148775 Expression data from water extracted olive leaf (WOL)-treated CD34+ cells
GSE148776 Expression data from Cyanidine (Cyanidine 3-glucoside)-treated human amnion epithelial cells (hAECs)
GSE148777 Expression data from isorhamnetin (Iso)-treated human amnion epithelial cells (hAECs)
GSE149033 Gene expression profile in human cumulus cells (CCs) during long-term in vitro culture
GSE153149 Expression data from isorhamnetin (Iso)-treated human amnion epithelial stem cells (hAESCs)
GSE153391 Expression data from adipocyte differentiation from diabetic adipose-derived stem cells (dADSC) treated with squalene (Sq) and its derivative (HH-Sq)
GSE153617 Expression data from TCQA-treated hAECs
GSE153918 Oral squamous cell carcinoma may originate from bone marrow-derived stem cells
GSE155789 Transcriptomic comparison of the vitamin A ester retinyl propionate and retinol in human keratinocytes
GSE159514 Gene expression profiling of granulocytes from primary and secondary myelofibrosis
GSE159915 IRAK1/4 and BET bromodomain inhibitions converge on NF-κB blockade and display synergistic antitumor activity in ABC-DLBCL with MYD88L265P mutation
GSE162190 Expression data profile of A498 cells infected with E. coli 83972, mutants or stimualted with rNlpD
GSE162250 Expression data profile of A498 cells infected with E. coli 536 or PAI I delation mutant
GSE162253 Bacterial effect on gene expression
GSE163091 Expression data from APC 50% or 80% -treated HFDPCs
GSE164760 Molecular characterization of hepatocellular carcinoma in patients with non-alcoholic steatohepatitis
GSE166427 Healthy, adjacent normal and tumor colon cells
GSE168760 Transcriptomic Analysis of Wound Healing and Skin Rejuvenation Following Ablative Fractional Laser Treatment of Human Skin
GSE173263 Gene expression profile in DLBCL cases according to response to R-CHOP
GSE174570 Cabozantinib enhances anti-PD1 efficacy and elicits a neutrophil-based immune response in murine models: implications for human HCC
GSE178510 Expression data from Minoxidil- and TCQA-2D treated HFDPCs
GSE178637 Expression data from Minoxidil- and TCQA-3D treated HFDPCs
GSE181022 Newborn infant skin gene expression: Remarkable differences versus adults
GSE185463 Expression data from glioma stem cells (GSC), comparing the WT cells to those after ALDH1A3-KO
GSE188411 Expression data from ethanol extract of Aurantiochytrium Sp. (EEA)-treated human amnion epithelial cells (hAECs)
GSE192444 The Trifecta study: comparing plasma donor-derived cell-free DNA levels with the molecular phenotype of kidney transplant biopsies
GSE199648 Expression data from Green cells (BT-GC) -treated HFDPCs
GSE199651 Expression data from Orange cells (BT-OC) -treated HFDPCs
GSE211839 Expression data from SQ, TRI-SQ and Tetra-SQ-treated HFDPCs
GSE226781 Stanniocalcin-1 mediates aortic valve calcification via promoting osteochondrogenic differentiation from valve interstitial cells
GSE227010 MicroRNA-1289 functions as a novel tumor suppressor in oral squamous cell carcinoma
GSE228781 Inter-patient heterogeneity in the hepatic ischemia-reperfusion injury transcriptome: implications for research and diagnostics [EMC data]
GSE228782 Inter-patient heterogeneity in the hepatic ischemia-reperfusion injury transcriptome: implications for research and diagnostics [MUG data]
GSE228783 Inter-patient heterogeneity in the hepatic ischemia-reperfusion injury transcriptome: implications for research and diagnostics
GSE230001 Estrogen receptor β affects hypoxia response in colorectal cancer cells
GSE230618 Gene expression data from diabetic human adipose-derived stem cells (d-hASC) treated with 1uM oleacein
GSE235835 Gene expression data from human neural stem cells (hNSCs) treated with 10 uM TCQA for 24 hours
GSE240389 Functional analysis of miR-375 in oral squamous cell carcinoma cells
GSE250122 The impact of endurance exercise on human skeletal muscle transcriptome
GSE254525 Quantification of totalRNA expression in oral squamous cell carcinoma(OSCC)
GSE275126 Subthreshold rejection activity in many kidney transplants currently classified as having no rejection.
GSE281811 Combined inhibition of histone methyltransferases EZH2 and DOT1L is an effective therapy for neuroblastoma
Relations Alternative to
GPL15803 ([Alternative ENSG Brainarray CDF Version 14.1.0])Alternative to
GPL18189 (Alternative CDF [HGU219_Hs_ENTREZG_15.1.0])Alternative to
GPL19099 (alternative)Alternative to
GPL19100 (alternative)Alternative to
GPL19211 (Alternative CDF [HGU219_Hs_ENSG_17.1.0])Alternative to
GPL19833 (Alternative CDF [HGU219_Hs_ENSG_18.0.0])Alternative to
GPL20650 (Alternative CDF [HG-U219_Hs_ENTREZG_18])Alternative to
GPL21464 (Alternative CDF [HGU219_Hs_ENTREZG_19.0.0])Alternative to
GPL24030 (Alternative CDF [HGU219_Hs_ENTREZG_20.0.0])Alternative to
GPL24052 (Alternative CDF)
Data table header descriptions ID GeneChip Array Species Scientific Name Annotation Date Sequence Type Sequence Source Transcript ID(Array Design) Target Description Representative Public ID Archival UniGene Cluster UniGene ID Genome Version Alignments Gene Title Gene Symbol Chromosomal Location GB_LIST GenBank accession numbers
SPOT_ID Unigene Cluster Type Ensembl Entrez Gene SwissProt EC OMIM RefSeq Protein ID RefSeq Transcript ID FlyBase AGI WormBase MGI Name RGD Name SGD accession number Gene Ontology Biological Process Gene Ontology Cellular Component Gene Ontology Molecular Function Pathway InterPro Trans Membrane QTL Annotation Description Annotation Transcript Cluster Transcript Assignments Annotation Notes
Data table ID GeneChip Array Species Scientific Name Annotation Date Sequence Type Sequence Source Transcript ID(Array Design) Target Description Representative Public ID Archival UniGene Cluster UniGene ID Genome Version Alignments Gene Title Gene Symbol Chromosomal Location GB_LIST SPOT_ID Unigene Cluster Type Ensembl Entrez Gene SwissProt EC OMIM RefSeq Protein ID RefSeq Transcript ID FlyBase AGI WormBase MGI Name RGD Name SGD accession number Gene Ontology Biological Process Gene Ontology Cellular Component Gene Ontology Molecular Function Pathway InterPro Trans Membrane QTL Annotation Description Annotation Transcript Cluster Transcript Assignments Annotation Notes 11715100_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g21264570
g21264570 /TID=g21264570 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g21264570 /REP_ORG=Homo sapiens
g21264570
---
Hs.247813
February 2009 (Genome Reference Consortium GRCh37)
chr6:26271145-26271612 (-) // 100.0 // p22.2
histone cluster 1, H3g
HIST1H3G
chr6p21.3
NM_003534 full length
---
8355
P68431
---
602815
NP_003525
NM_003534
---
---
---
---
---
---
0006334 // nucleosome assembly // inferred from electronic annotation
0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation
0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction
---
---
---
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A
NM_003534(11)
NM_003534 // Homo sapiens histone cluster 1, H3g (HIST1H3G), mRNA. // refseq // 11 // ---
BC079835 // gb_htc // 6 // Cross Hyb Matching Probes
11715101_s_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g21264570
g21264570 /TID=g21264570 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g21264570 /REP_ORG=Homo sapiens
g21264570
---
Hs.247813
February 2009 (Genome Reference Consortium GRCh37)
chr6:26271145-26271612 (-) // 100.0 // p22.2
histone cluster 1, H3g
HIST1H3G
chr6p21.3
NM_003534 full length
ENSG00000178458
8355
P68431
---
602815
NP_003525
NM_003534
---
---
---
---
---
---
0006334 // nucleosome assembly // inferred from electronic annotation
0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation
0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction
---
---
---
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A
BC079835(11),NM_003534(11)
BC079835 // Homo sapiens histone cluster 1, H3g, mRNA (cDNA clone IMAGE:5935692). // gb_htc // 11 // --- /// ENST00000321285 // cdna:known chromosome:GRCh37:6:26271202:26271612:-1 gene:ENSG00000178458 // ensembl // 11 // --- /// GENSCAN00000044911 // cdna:Genscan chromosome:GRCh37:6:26271202:26271612:-1 // ensembl // 11 // --- /// NM_003534 // Homo sapiens histone cluster 1, H3g (HIST1H3G), mRNA. // refseq // 11 // ---
---
11715102_x_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g21264570
g21264570 /TID=g21264570 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g21264570 /REP_ORG=Homo sapiens
g21264570
---
Hs.247813
February 2009 (Genome Reference Consortium GRCh37)
chr6:26271145-26271612 (-) // 100.0 // p22.2
histone cluster 1, H3g
HIST1H3G
chr6p21.3
NM_003534 full length
---
8355
P68431
---
602815
NP_003525
NM_003534
---
---
---
---
---
---
0006334 // nucleosome assembly // inferred from electronic annotation
0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation
0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction
---
---
---
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A
NM_003534(11)
NM_003534 // Homo sapiens histone cluster 1, H3g (HIST1H3G), mRNA. // refseq // 11 // ---
GENSCAN00000044911 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000321285 // ensembl // 4 // Cross Hyb Matching Probes /// BC079835 // gb_htc // 7 // Cross Hyb Matching Probes
11715103_x_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g22748780
g22748780 /TID=g22748780 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g22748780 /REP_ORG=Homo sapiens
g22748780
---
Hs.465643
February 2009 (Genome Reference Consortium GRCh37)
chr19:4639529-5145579 (+) // 48.53 // p13.3
tumor necrosis factor, alpha-induced protein 8-like 1
TNFAIP8L1
chr19p13.3
NM_001167942 , NM_152362 full length
ENSG00000185361
126282
Q8WVP5
---
---
NP_001161414 /// NP_689575
NM_001167942 /// NM_152362
---
---
---
---
---
---
---
---
---
---
---
---
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 5 transcripts. // false // Matching Probes // A
BC017672(11),BC044250(9),ENST00000327473(11),NM_001167942(11),NM_152362(11)
BC017672 // Homo sapiens tumor necrosis factor, alpha-induced protein 8-like 1, mRNA (cDNA clone MGC:17791 IMAGE:3885999), complete cds. // gb // 11 // --- /// BC044250 // Homo sapiens tumor necrosis factor, alpha-induced protein 8-like 1, mRNA (cDNA clone IMAGE:5784807). // gb // 9 // --- /// ENST00000327473 // cdna:known chromosome:GRCh37:19:4639530:4653952:1 gene:ENSG00000185361 // ensembl // 11 // --- /// NM_001167942 // Homo sapiens tumor necrosis factor, alpha-induced protein 8-like 1 (TNFAIP8L1), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_152362 // Homo sapiens tumor necrosis factor, alpha-induced protein 8-like 1 (TNFAIP8L1), transcript variant 2, mRNA. // refseq // 11 // ---
---
11715104_s_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g30039713
g30039713 /TID=g30039713 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g30039713 /REP_ORG=Homo sapiens
g30039713
---
Hs.352515
February 2009 (Genome Reference Consortium GRCh37)
chr17:72920369-72929640 (+) // 100.0 // q25.1
otopetrin 2
OTOP2
chr17q25.1
NM_178160 full length
ENSG00000183034
92736
Q7RTS6
---
607827
NP_835454
NM_178160
---
---
---
---
---
---
---
0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation
---
---
IPR004878 // Protein of unknown function DUF270 // 1.0E-6 /// IPR004878 // Protein of unknown function DUF270 // 1.0E-13
NP_835454.1 // span:30-52,62-81,101-120,135-157,240-262,288-310,327-349,369-391,496-515,525-547 // numtm:10
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A
ENST00000331427(11),ENST00000426069(11),NM_178160(11)
ENST00000331427 // cdna:known chromosome:GRCh37:17:72920370:72929640:1 gene:ENSG00000183034 // ensembl // 11 // --- /// ENST00000426069 // cdna:known chromosome:GRCh37:17:72920370:72929640:1 gene:ENSG00000183034 // ensembl // 11 // --- /// NM_178160 // Homo sapiens otopetrin 2 (OTOP2), mRNA. // refseq // 11 // ---
GENSCAN00000031612 // ensembl // 8 // Cross Hyb Matching Probes
11715105_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g45580703
g45580703 /TID=g45580703 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g45580703 /REP_ORG=Homo sapiens
g45580703
---
Hs.439154
February 2009 (Genome Reference Consortium GRCh37)
chr17:35732984-35749660 (+) // 98.15 // q12
chromosome 17 open reading frame 78
C17orf78
chr17q12
NM_173625 full length
ENSG00000167230
284099
Q8N4C9
---
---
NP_775896
NM_173625
---
---
---
---
---
---
---
0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation
---
---
---
AAH34672.1 // span:184-206 // numtm:1 /// NP_775896.3 // span:184-206 // numtm:1
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 5 transcripts. // false // Matching Probes // A
AK096966(10),BC034672(11),ENST00000300618(11),ENST00000321564(11),NM_173625(11)
AK096966 // Homo sapiens cDNA FLJ39647 fis, clone SMINT2004781. // gb // 10 // --- /// BC034672 // Homo sapiens chromosome 17 open reading frame 78, mRNA (cDNA clone MGC:34759 IMAGE:5184947), complete cds. // gb // 11 // --- /// ENST00000300618 // cdna:known chromosome:GRCh37:17:35732985:35749660:1 gene:ENSG00000167230 // ensembl // 11 // --- /// ENST00000321564 // cdna:known chromosome:GRCh37:17:35732985:35749660:1 gene:ENSG00000167230 // ensembl // 11 // --- /// NM_173625 // Homo sapiens chromosome 17 open reading frame 78 (C17orf78), mRNA. // refseq // 11 // ---
---
11715106_x_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g56847633
g56847633 /TID=g56847633 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g56847633 /REP_ORG=Homo sapiens
g56847633
---
Hs.676333
February 2009 (Genome Reference Consortium GRCh37)
chr7:143268889-143271244 (+) // 100.0 // q35 /// chr7:143880575-143882930 (+) // 98.34 // q35 /// chr13:75812159-75814497 (-) // 94.18 // q22.2 /// chr2:168570249-168572595 (-) // 94.01 // q24.3 /// chr6:132029823-132032178 (-) // 98.13 // q23.2 /// chr7:143452417-143454772 (-) // 99.75 // q35 /// chr7:143964009-143966364 (-) // 98.56 // q35
CTAGE family, member 6
CTAGE6
chr7q35
NM_178561 full length
ENSG00000176227 /// ENSG00000176366
340307
Q86UF2
---
---
NP_848656
NM_178561
---
---
---
---
---
---
---
0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation
---
---
---
NP_848656.2 // span:38-60 // numtm:1
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A
BC110410(10),NM_178561(11)
BC110410 // Homo sapiens cDNA clone IMAGE:5741961, containing frame-shift errors. // gb_htc // 10 // --- /// ENST00000324143 // cdna:pseudogene chromosome:GRCh37:7:143452418:143454617:-1 gene:ENSG00000176366 // ensembl // 11 // --- /// ENST00000420911 // cdna:pseudogene chromosome:GRCh37:7:143268911:143271320:1 gene:ENSG00000176227 // ensembl // 11 // --- /// ENST00000447022 // cdna:pseudogene chromosome:GRCh37:7:143268819:143271478:1 gene:ENSG00000176227 // ensembl // 11 // --- /// GENSCAN00000026791 // cdna:Genscan chromosome:GRCh37:7:143268911:143271244:1 // ensembl // 11 // --- /// GENSCAN00000047893 // cdna:Genscan chromosome:GRCh37:7:143452418:143454751:-1 // ensembl // 11 // --- /// NM_178561 // Homo sapiens CTAGE family, member 6 (CTAGE6), mRNA. // refseq // 11 // ---
GENSCAN00000058144 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000058143 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000037055 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000434925 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000458415 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000314099 // ensembl // 2 // Cross Hyb Matching Probes /// BC146818 // gb // 8 // Cross Hyb Matching Probes /// AK292236 // gb // 2 // Cross Hyb Matching Probes /// AF338232 // gb // 2 // Cross Hyb Matching Probes /// NM_198495 // refseq // 2 // Cross Hyb Matching Probes /// NM_001145659 // refseq // 2 // Cross Hyb Matching Probes
11715107_s_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g56090587
g56090587 /TID=g56090587 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g56090587 /REP_ORG=Homo sapiens
g56090587
---
Hs.533543
February 2009 (Genome Reference Consortium GRCh37)
chrX:154611763-154612879 (+) // 93.1 // q28 /// chrX:154114649-154115765 (+) // 93.1 // q28 /// chrX:154687145-154688261 (-) // 93.1 // q28
coagulation factor VIII-associated (intronic transcript) 1 /// coagulation factor VIII-associated (intronic transcript) 2 /// coagulation factor VIII-associated (intronic transcript) 3
F8A1 /// F8A2 /// F8A3
chrXq28
NM_001007523 , NM_001007524 , NM_012151 full length
ENSG00000185990 /// ENSG00000197932 /// ENSG00000198444
474383 /// 474384 /// 8263
P23610
---
305423
NP_001007524 /// NP_001007525 /// NP_036283
NM_001007523 /// NM_001007524 /// NM_012151
---
---
---
---
---
---
---
0005634 // nucleus // inferred from direct assay
---
Blood_Clotting_Cascade // GenMAPP
---
---
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 9 transcripts. // true // Matching Probes // A
GENSCAN00000006148(11),GENSCAN00000059136(11),GENSCAN00000003395(11),ENST00000369446(11),ENST00000369505(11),ENST00000369445(11),BC039693(11),BC071963(11),NM_012151(11),NM_001007523(11),NM_001007524(11)
BC039693 // Homo sapiens coagulation factor VIII-associated (intronic transcript) 1, mRNA (cDNA clone MGC:44976 IMAGE:5214628), complete cds. // gb // 11 // --- /// BC071963 // Homo sapiens coagulation factor VIII-associated (intronic transcript) 1, mRNA (cDNA clone MGC:88655 IMAGE:5477018), complete cds. // gb // 11 // --- /// ENST00000369445 // cdna:known chromosome:GRCh37:X:154686576:154688276:-1 gene:ENSG00000185990 // ensembl // 11 // --- /// ENST00000369446 // cdna:known chromosome:GRCh37:X:154114635:154116335:1 gene:ENSG00000197932 // ensembl // 11 // --- /// ENST00000369505 // cdna:known chromosome:GRCh37:X:154611749:154613449:1 gene:ENSG00000198444 // ensembl // 11 // --- /// GENSCAN00000003395 // cdna:Genscan chromosome:GRCh37:X:154114650:154115765:1 // ensembl // 11 // --- /// GENSCAN00000006148 // cdna:Genscan chromosome:GRCh37:X:154687146:154688261:-1 // ensembl // 11 // --- /// GENSCAN00000059136 // cdna:Genscan chromosome:GRCh37:X:154611764:154612879:1 // ensembl // 11 // --- /// NM_001007523 // Homo sapiens coagulation factor VIII-associated (intronic transcript) 2 (F8A2), mRNA. // refseq // 11 // --- /// NM_001007524 // Homo sapiens coagulation factor VIII-associated (intronic transcript) 3 (F8A3), mRNA. // refseq // 11 // --- /// NM_012151 // Homo sapiens coagulation factor VIII-associated (intronic transcript) 1 (F8A1), mRNA. // refseq // 11 // ---
---
11715108_x_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g148236060
g148236060 /TID=g148236060 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g148236060 /REP_ORG=Homo sapiens
g148236060
---
Hs.722466
February 2009 (Genome Reference Consortium GRCh37)
chr4:178649906-178911669 (+) // 49.63 // q34.3
hypothetical protein LOC285501
LOC285501
chr4q34.3
NM_001085490 , NR_028342 ---
---
285501
---
---
---
NP_001078959
NM_001085490 /// NR_028342
---
---
---
---
---
---
---
---
---
---
---
---
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A
BC033326(10),NR_028342(9)
BC033326 // Homo sapiens cDNA clone IMAGE:4828874. // gb // 10 // --- /// NR_028342 // Homo sapiens hypothetical protein LOC285501 (LOC285501), non-coding RNA. // refseq // 9 // ---
ENST00000431174 // ensembl // 2 // Cross Hyb Matching Probes
11715109_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g141802512
g141802512 /TID=g141802512 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g141802512 /REP_ORG=Homo sapiens
g141802512
---
Hs.439922
February 2009 (Genome Reference Consortium GRCh37)
chr3:169629481-169656946 (+) // 83.11 // q26.2
sterile alpha motif domain containing 7
SAMD7
chr3q26.2
NM_182610 full length
ENSG00000187033
344658
Q7Z3H4
---
---
NP_872416
NM_182610
---
---
---
---
---
---
---
---
---
---
---
---
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 5 transcripts. // false // Matching Probes // A
BX537903(11),BX648991(11),ENST00000335556(11),ENST00000428432(11),NM_182610(11)
BX537903 // Homo sapiens mRNA; cDNA DKFZp686E1583 (from clone DKFZp686E1583); complete cds. // gb // 11 // --- /// BX648991 // Homo sapiens mRNA; cDNA DKFZp686J0784 (from clone DKFZp686J0784). // gb // 11 // --- /// ENST00000335556 // cdna:known chromosome:GRCh37:3:169629360:169656946:1 gene:ENSG00000187033 // ensembl // 11 // --- /// ENST00000428432 // cdna:known chromosome:GRCh37:3:169629482:169656946:1 gene:ENSG00000187033 // ensembl // 11 // --- /// NM_182610 // Homo sapiens sterile alpha motif domain containing 7 (SAMD7), mRNA. // refseq // 11 // ---
---
11715110_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g122937477
g122937477 /TID=g122937477 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g122937477 /REP_ORG=Homo sapiens
g122937477
---
Hs.574574
February 2009 (Genome Reference Consortium GRCh37)
chr19:4890448-4902879 (-) // 80.46 // p13.3
arrestin domain containing 5
ARRDC5
chr19p13.3
NM_001080523 full length
ENSG00000205784
645432
A6NEK1
---
---
NP_001073992
NM_001080523
---
---
---
---
---
---
---
---
---
---
---
---
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A
ENST00000381781(11),NM_001080523(11)
ENST00000381781 // cdna:known chromosome:GRCh37:19:4890449:4902879:-1 gene:ENSG00000205784 // ensembl // 11 // --- /// NM_001080523 // Homo sapiens arrestin domain containing 5 (ARRDC5), mRNA. // refseq // 11 // ---
---
11715111_s_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g146229337
g146229337 /TID=g146229337 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g146229337 /REP_ORG=Homo sapiens
g146229337
---
Hs.659014
February 2009 (Genome Reference Consortium GRCh37)
chr19:49547094-49548567 (+) // 97.35 // q13.33 /// chr19:49550895-49552368 (-) // 98.01 // q13.33 /// chr19:49526126-49527600 (-) // 97.12 // q13.33 /// chr19:49538826-49559004 (-) // 95.35 // q13.33
chorionic gonadotropin, beta polypeptide /// chorionic gonadotropin, beta polypeptide 1 /// chorionic gonadotropin, beta polypeptide 2 /// chorionic gonadotropin, beta polypeptide 5 /// chorionic gonadotropin, beta polypeptide 7 /// chorionic gonadotropin, beta polypeptide 8
CGB /// CGB1 /// CGB2 /// CGB5 /// CGB7 /// CGB8
chr19q13.32
NM_000737 , NM_033043 , NM_033142 , NM_033183 , NM_033377 , NM_033378 full length
ENSG00000104818 /// ENSG00000104827 /// ENSG00000189052 /// ENSG00000196337 /// ENSG00000204748 /// ENSG00000213030
1082 /// 114335 /// 114336 /// 93659 /// 94027 /// 94115
A6NKQ9 /// B4DNG3 /// P01233 /// Q6NT52
---
118860 /// 608823 /// 608824 /// 608825 /// 608826 /// 608827
NP_000728 /// NP_149032 /// NP_149133 /// NP_149439 /// NP_203695 /// NP_203696
NM_000737 /// NM_033043 /// NM_033142 /// NM_033183 /// NM_033377 /// NM_033378
---
---
---
---
---
---
0006915 // apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor protein signaling pathway // not recorded /// 0007267 // cell-cell signaling // traceable author statement /// 0007292 // female gamete generation // traceable author statement
0005576 // extracellular region // not recorded /// 0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement
0005179 // hormone activity // inferred from electronic annotation /// 0005179 // hormone activity // traceable author statement
Cell_cycle_KEGG // GenMAPP /// G1_to_S_cell_cycle_Reactome // GenMAPP
---
---
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 27 transcripts. // true // Matching Probes // A
GENSCAN00000000530(11),GENSCAN00000000522(11),GENSCAN00000000525(11),GENSCAN00000000526(11),GENSCAN00000000532(11),ENST00000448402(11),ENST00000357383(11),ENST00000359342(11),ENST00000301407(11),ENST00000391869(11),ENST00000428927(11),ENST00000301408(11),ENST00000448456(11),ENST00000355414(11),ENST00000356213(11),ENST00000377280(11),BC103969(11),BC103970(11),BC103971(11),BC106059(11),BC106723(11),BC106724(11),BC107144(11),BC128603(11),BT006890(11),J00117(11),AK125108(11),AK291552(11),BC006290(11),BC022796(11),BC030994(11),BC041054(11),BC051378(11),BC069367(10),BC069526(11),NM_000737(11),NM_033378(11),NM_033043(11),NM_033377(11),NM_033183(11),NM_033142(11)
AK125108 // Homo sapiens cDNA FLJ43118 fis, clone CTONG3002909, highly similar to CHORIOGONADOTROPIN BETA CHAIN PRECURSOR. // gb // 11 // --- /// AK291552 // Homo sapiens cDNA FLJ78519 complete cds. // gb // 11 // --- /// BC006290 // Homo sapiens chorionic gonadotropin, beta polypeptide 5, mRNA (cDNA clone MGC:10399 IMAGE:3960125), complete cds. // gb // 11 // --- /// BC022796 // Homo sapiens chorionic gonadotropin, beta polypeptide, mRNA (cDNA clone MGC:39080 IMAGE:4811294), complete cds. // gb // 11 // --- /// BC030994 // Homo sapiens chorionic gonadotropin, beta polypeptide 8, mRNA (cDNA clone MGC:32699 IMAGE:4605021), complete cds. // gb // 11 // --- /// BC041054 // Homo sapiens chorionic gonadotropin, beta polypeptide, mRNA (cDNA clone MGC:52151 IMAGE:5431911), complete cds. // gb // 11 // --- /// BC051378 // Homo sapiens chorionic gonadotropin, beta polypeptide 5, mRNA (cDNA clone MGC:59699 IMAGE:3956670), complete cds. // gb // 11 // --- /// BC069367 // Homo sapiens chorionic gonadotropin, beta polypeptide 2, mRNA (cDNA clone MGC:96947 IMAGE:7262156), complete cds. // gb // 10 // --- /// BC069526 // Homo sapiens chorionic gonadotropin, beta polypeptide, mRNA (cDNA clone MGC:96911 IMAGE:7262120), complete cds. // gb // 11 // --- /// BC103969 // Homo sapiens chorionic gonadotropin, beta polypeptide 8, mRNA (cDNA clone MGC:119854 IMAGE:40014676), complete cds. // gb // 11 // --- /// BC103970 // Homo sapiens chorionic gonadotropin, beta polypeptide 5, mRNA (cDNA clone MGC:119855 IMAGE:40014677), complete cds. // gb // 11 // --- /// BC103971 // Homo sapiens chorionic gonadotropin, beta polypeptide 5, mRNA (cDNA clone MGC:119856 IMAGE:40014679), complete cds. // gb // 11 // --- /// BC106059 // Homo sapiens chorionic gonadotropin, beta polypeptide, mRNA (cDNA clone MGC:117343 IMAGE:4992804), complete cds. // gb // 11 // --- /// BC106723 // Homo sapiens chorionic gonadotropin, beta polypeptide 5, mRNA (cDNA clone MGC:119822 IMAGE:40014469), complete cds. // gb // 11 // --- /// BC106724 // Homo sapiens chorionic gonadotropin, beta polypeptide 5, mRNA (cDNA clone MGC:119823 IMAGE:40014470), complete cds. // gb // 11 // --- /// BC107144 // Homo sapiens chorionic gonadotropin, beta polypeptide 1, mRNA (cDNA clone IMAGE:40030883). // gb // 11 // --- /// BC128603 // Homo sapiens chorionic gonadotropin, beta polypeptide, mRNA (cDNA clone MGC:158885 IMAGE:40002893), complete cds. // gb // 11 // --- /// BT006890 // Homo sapiens chorionic gonadotropin, beta polypeptide mRNA, complete cds. // gb // 11 // --- /// ENST00000301407 // cdna:known chromosome:GRCh37:19:49538826:49540191:-1 gene:ENSG00000204748 // ensembl // 11 // --- /// ENST00000301408 // cdna:known chromosome:GRCh37:19:49547063:49548566:1 gene:ENSG00000189052 // ensembl // 11 // --- /// ENST00000355414 // cdna:known chromosome:GRCh37:19:49550897:49552400:-1 gene:ENSG00000213030 // ensembl // 11 // --- /// ENST00000356213 // cdna:known chromosome:GRCh37:19:49557548:49559036:-1 gene:ENSG00000196337 // ensembl // 11 // --- /// ENST00000357383 // cdna:known chromosome:GRCh37:19:49526128:49527632:-1 gene:ENSG00000104827 // ensembl // 11 // --- /// ENST00000359342 // cdna:known chromosome:GRCh37:19:49535130:49536495:1 gene:ENSG00000104818 // ensembl // 11 // --- /// ENST00000377280 // cdna:known chromosome:GRCh37:19:49557548:49559036:-1 gene:ENSG00000196337 // ensembl // 11 // --- /// ENST00000391869 // cdna:known chromosome:GRCh37:19:49538828:49540017:-1 gene:ENSG00000204748 // ensembl // 11 // --- /// ENST00000428927 // cdna:known chromosome:GRCh37:19:49547063:49548566:1 gene:ENSG00000189052 // ensembl // 11 // --- /// ENST00000448402 // cdna:known chromosome:GRCh37:19:49526128:49527632:-1 gene:ENSG00000104827 // ensembl // 11 // --- /// ENST00000448456 // cdna:known chromosome:GRCh37:19:49550897:49552400:-1 gene:ENSG00000213030 // ensembl // 11 // --- /// GENSCAN00000000522 // cdna:Genscan chromosome:GRCh37:19:49535698:49536478:1 // ensembl // 11 // --- /// GENSCAN00000000525 // cdna:Genscan chromosome:GRCh37:19:49538867:49539623:-1 // ensembl // 11 // --- /// GENSCAN00000000526 // cdna:Genscan chromosome:GRCh37:19:49545329:49548551:1 // ensembl // 11 // --- /// GENSCAN00000000530 // cdna:Genscan chromosome:GRCh37:19:49526143:49529353:-1 // ensembl // 11 // --- /// GENSCAN00000000532 // cdna:Genscan chromosome:GRCh37:19:49550912:49562024:-1 // ensembl // 11 // --- /// J00117 // Human chorionic gonadotropin (hcg) beta subunit mRNA, complete cds. // gb // 11 // --- /// NM_000737 // Homo sapiens chorionic gonadotropin, beta polypeptide (CGB), mRNA. // refseq // 11 // --- /// NM_033043 // Homo sapiens chorionic gonadotropin, beta polypeptide 5 (CGB5), mRNA. // refseq // 11 // --- /// NM_033142 // Homo sapiens chorionic gonadotropin, beta polypeptide 7 (CGB7), mRNA. // refseq // 11 // --- /// NM_033183 // Homo sapiens chorionic gonadotropin, beta polypeptide 8 (CGB8), mRNA. // refseq // 11 // --- /// NM_033377 // Homo sapiens chorionic gonadotropin, beta polypeptide 1 (CGB1), mRNA. // refseq // 11 // --- /// NM_033378 // Homo sapiens chorionic gonadotropin, beta polypeptide 2 (CGB2), mRNA. // refseq // 11 // ---
---
11715112_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g83921608
g83921608 /TID=g83921608 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g83921608 /REP_ORG=Homo sapiens
g83921608
---
Hs.531182
February 2009 (Genome Reference Consortium GRCh37)
chr1:75033795-75139422 (-) // 93.68 // p31.1
chromosome 1 open reading frame 173
C1orf173
chr1p31.1
NM_001002912 full length
ENSG00000178965
127254
C9J2V0 /// C9JMX6 /// Q5RHP9
---
---
NP_001002912
NM_001002912
---
---
---
---
---
---
---
---
---
---
---
---
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 5 transcripts. // false // Matching Probes // A
CR749349(11),ENST00000326665(11),ENST00000342217(11),ENST00000433746(11),NM_001002912(11)
CR749349 // Homo sapiens mRNA; cDNA DKFZp781L0319 (from clone DKFZp781L0319). // gb_htc // 11 // --- /// ENST00000326665 // cdna:known chromosome:GRCh37:1:75033798:75139422:-1 gene:ENSG00000178965 // ensembl // 11 // --- /// ENST00000342217 // cdna:known chromosome:GRCh37:1:75033798:75132528:-1 gene:ENSG00000178965 // ensembl // 11 // --- /// ENST00000433746 // cdna:known chromosome:GRCh37:1:75033798:75100360:-1 gene:ENSG00000178965 // ensembl // 11 // --- /// NM_001002912 // Homo sapiens chromosome 1 open reading frame 173 (C1orf173), mRNA. // refseq // 11 // ---
---
11715113_x_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g153251793
g153251793 /TID=g153251793 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g153251793 /REP_ORG=Homo sapiens
g153251793
---
Hs.567527
February 2009 (Genome Reference Consortium GRCh37)
chr11:71498556-71512280 (+) // 95.31 // q13.4 /// chr11:3429472-3443752 (-) // 89.14 // p15.4
family with sequence similarity 86, member C
FAM86C
chr11q13.4
NM_001099653 , NM_018172 , NM_152563 full length
ENSG00000158483
55199
B2RD94 /// B4DDJ9 /// Q05BU3 /// Q9NVL1
---
---
NP_001093123 /// NP_060642 /// NP_689776
NM_001099653 /// NM_018172 /// NM_152563
---
---
---
---
---
---
---
---
---
---
---
---
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 7 transcripts. // false // Matching Probes // A
BC032519(11),ENST00000346333(10),ENST00000359244(10),ENST00000426628(10),NM_001099653(11),NM_018172(11),NM_152563(11)
BC032519 // Homo sapiens family with sequence similarity 86, member C, mRNA (cDNA clone MGC:45068 IMAGE:5494088), complete cds. // gb // 11 // --- /// ENST00000346333 // cdna:known chromosome:GRCh37:11:71498557:71512273:1 gene:ENSG00000158483 // ensembl // 10 // --- /// ENST00000359244 // cdna:known chromosome:GRCh37:11:71498557:71512273:1 gene:ENSG00000158483 // ensembl // 10 // --- /// ENST00000426628 // cdna:known chromosome:GRCh37:11:71498557:71512273:1 gene:ENSG00000158483 // ensembl // 10 // --- /// NM_001099653 // Homo sapiens family with sequence similarity 86, member C (FAM86C), transcript variant 3, mRNA. // refseq // 11 // --- /// NM_018172 // Homo sapiens family with sequence similarity 86, member C (FAM86C), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_152563 // Homo sapiens family with sequence similarity 86, member C (FAM86C), transcript variant 2, mRNA. // refseq // 11 // ---
ENST00000340537 // ensembl // 8 // Cross Hyb Matching Probes /// ENST00000448228 // ensembl // 8 // Cross Hyb Matching Probes /// ENST00000313946 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000304751 // ensembl // 1 // Cross Hyb Matching Probes /// ENST00000431227 // ensembl // 1 // Cross Hyb Matching Probes /// BC085016 // gb // 8 // Cross Hyb Matching Probes /// BC098427 // gb // 5 // Cross Hyb Matching Probes /// AK127422 // gb // 1 // Cross Hyb Matching Probes /// BC040317 // gb // 1 // Cross Hyb Matching Probes /// BC062615 // gb // 8 // Cross Hyb Matching Probes /// BC068011 // gb // 6 // Cross Hyb Matching Probes /// AK026807 // gb // 6 // Cross Hyb Matching Probes /// BC007983 // gb_htc // 8 // Cross Hyb Matching Probes /// BC048297 // gb_htc // 8 // Cross Hyb Matching Probes /// BC065013 // gb_htc // 8 // Cross Hyb Matching Probes /// BC072459 // gb_htc // 8 // Cross Hyb Matching Probes /// NR_024252 // refseq // 1 // Cross Hyb Matching Probes /// NR_024254 // refseq // 8 // Cross Hyb Matching Probes /// NR_024241 // refseq // 6 // Cross Hyb Matching Probes /// NM_001083537 // refseq // 8 // Cross Hyb Matching Probes /// NR_003494 // refseq // 8 // Cross Hyb Matching Probes
11715114_x_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g153251810
g153251810 /TID=g153251810 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g153251810 /REP_ORG=Homo sapiens
g153251810
---
Hs.567527
February 2009 (Genome Reference Consortium GRCh37)
chr11:71498556-71512280 (+) // 95.49 // q13.4 /// chr11:3429472-3443752 (-) // 89.41 // p15.4
family with sequence similarity 86, member C
FAM86C
chr11q13.4
NM_001099653 , NM_018172 , NM_152563 full length
ENSG00000158483
55199
B2RD94 /// B4DDJ9 /// Q05BU3 /// Q9NVL1
---
---
NP_001093123 /// NP_060642 /// NP_689776
NM_001099653 /// NM_018172 /// NM_152563
---
---
---
---
---
---
---
---
---
---
---
---
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 7 transcripts. // false // Matching Probes // A
BC032519(11),ENST00000346333(10),ENST00000359244(10),ENST00000426628(10),NM_001099653(11),NM_018172(11),NM_152563(11)
BC032519 // Homo sapiens family with sequence similarity 86, member C, mRNA (cDNA clone MGC:45068 IMAGE:5494088), complete cds. // gb // 11 // --- /// ENST00000346333 // cdna:known chromosome:GRCh37:11:71498557:71512273:1 gene:ENSG00000158483 // ensembl // 10 // --- /// ENST00000359244 // cdna:known chromosome:GRCh37:11:71498557:71512273:1 gene:ENSG00000158483 // ensembl // 10 // --- /// ENST00000426628 // cdna:known chromosome:GRCh37:11:71498557:71512273:1 gene:ENSG00000158483 // ensembl // 10 // --- /// NM_001099653 // Homo sapiens family with sequence similarity 86, member C (FAM86C), transcript variant 3, mRNA. // refseq // 11 // --- /// NM_018172 // Homo sapiens family with sequence similarity 86, member C (FAM86C), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_152563 // Homo sapiens family with sequence similarity 86, member C (FAM86C), transcript variant 2, mRNA. // refseq // 11 // ---
ENST00000340537 // ensembl // 8 // Cross Hyb Matching Probes /// ENST00000448228 // ensembl // 8 // Cross Hyb Matching Probes /// ENST00000313946 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000304751 // ensembl // 1 // Cross Hyb Matching Probes /// ENST00000431227 // ensembl // 1 // Cross Hyb Matching Probes /// BC085016 // gb // 8 // Cross Hyb Matching Probes /// BC098427 // gb // 5 // Cross Hyb Matching Probes /// AK127422 // gb // 1 // Cross Hyb Matching Probes /// BC040317 // gb // 1 // Cross Hyb Matching Probes /// BC062615 // gb // 8 // Cross Hyb Matching Probes /// BC068011 // gb // 6 // Cross Hyb Matching Probes /// AK026807 // gb // 6 // Cross Hyb Matching Probes /// BC007983 // gb_htc // 8 // Cross Hyb Matching Probes /// BC048297 // gb_htc // 8 // Cross Hyb Matching Probes /// BC065013 // gb_htc // 8 // Cross Hyb Matching Probes /// BC072459 // gb_htc // 8 // Cross Hyb Matching Probes /// NR_024252 // refseq // 1 // Cross Hyb Matching Probes /// NR_024254 // refseq // 8 // Cross Hyb Matching Probes /// NR_024241 // refseq // 6 // Cross Hyb Matching Probes /// NM_001083537 // refseq // 8 // Cross Hyb Matching Probes /// NR_003494 // refseq // 8 // Cross Hyb Matching Probes
11715115_s_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g21166387
g21166387 /TID=g21166387 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g21166387 /REP_ORG=Homo sapiens
g21166387
---
Hs.553506
February 2009 (Genome Reference Consortium GRCh37)
chr6:26273203-26273640 (+) // 100.0 // p22.2
histone cluster 1, H2bi
HIST1H2BI
chr6p21.3
NM_003525 full length
---
8346
B2R4S9 /// P62807
---
602807
NP_003516
NM_003525
---
---
---
---
---
---
0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement /// 0042742 // defense response to bacterium // inferred from electronic annotation
0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation
0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction
---
---
---
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A
NM_003525(11)
NM_003525 // Homo sapiens histone cluster 1, H2bi (HIST1H2BI), mRNA. // refseq // 11 // ---
ENST00000377733 // ensembl // 4 // Cross Hyb Matching Probes /// BC101653 // gb // 4 // Cross Hyb Matching Probes /// BC101655 // gb // 4 // Cross Hyb Matching Probes
11715116_s_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g21264600
g21264600 /TID=g21264600 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g21264600 /REP_ORG=Homo sapiens
g21264600
---
Hs.662174
February 2009 (Genome Reference Consortium GRCh37)
chr6:26204872-26205249 (+) // 100.0 // p22.2
histone cluster 1, H4e
HIST1H4E
chr6p21.3
NM_003545 full length
ENSG00000198518
8367
B2R4R0 /// P62805 /// Q0VAS5 /// Q6B823
---
602830
NP_003536
NM_003545
---
---
---
---
---
---
0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphoinositide-mediated signaling // non-traceable author statement
0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation
0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction
---
IPR004823 // TATA box binding protein associated factor (TAF) // 1.8E-4
---
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A
NM_003545(11)
ENST00000360441 // cdna:known chromosome:GRCh37:6:26204858:26206266:1 gene:ENSG00000198518 // ensembl // 11 // --- /// NM_003545 // Homo sapiens histone cluster 1, H4e (HIST1H4E), mRNA. // refseq // 11 // ---
GENSCAN00000044918 // ensembl // 6 // Cross Hyb Matching Probes /// CR542180 // gb // 6 // Cross Hyb Matching Probes /// CR542189 // gb // 6 // Cross Hyb Matching Probes /// AK312153 // gb_htc // 6 // Cross Hyb Matching Probes
11715117_x_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g15718715
g15718715 /TID=g15718715 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g15718715 /REP_ORG=Homo sapiens
g15718715
---
Hs.406691
February 2009 (Genome Reference Consortium GRCh37)
chr6:27782079-27782518 (-) // 100.0 // p22.1
histone cluster 1, H2aj
HIST1H2AJ
chr6p22-p21.3
NM_021066 full length
ENSG00000182611
8331
Q99878
---
602791
NP_066544
NM_021066
---
---
---
---
---
---
0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement
0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation
0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement
---
---
---
---
This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A
NM_021066(11)
ENST00000333151 // cdna:known chromosome:GRCh37:6:27782080:27782518:-1 gene:ENSG00000182611 // ensembl // 11 // --- /// NM_021066 // Homo sapiens histone cluster 1, H2aj (HIST1H2AJ), mRNA. // refseq // 11 // ---
GENSCAN00000021378 // ensembl // 1 // Cross Hyb Matching Probes /// GENSCAN00000044397 // ensembl // 1 // Cross Hyb Matching Probes /// ENST00000358739 // ensembl // 1 // Cross Hyb Matching Probes /// BC112254 // gb // 1 // Cross Hyb Matching Probes /// BC112256 // gb // 1 // Cross Hyb Matching Probes /// BC133048 // gb // 5 // Cross Hyb Matching Probes /// BC133050 // gb // 5 // Cross Hyb Matching Probes /// NM_003509 // refseq // 1 // Cross Hyb Matching Probes
11715118_s_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g21396482
g21396482 /TID=g21396482 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g21396482 /REP_ORG=Homo sapiens
g21396482
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Hs.182137
February 2009 (Genome Reference Consortium GRCh37)
chr6:26199786-26200216 (+) // 100.0 // p22.2
histone cluster 1, H2bf
HIST1H2BF
chr6p21.3
NM_003522 full length
ENSG00000197846
8343
B2R4S9 /// P62807 /// Q0D2M2
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602804
NP_003513
NM_003522
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0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement /// 0042742 // defense response to bacterium // inferred from electronic annotation
0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation
0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction
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This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A
BC056264(11),BC096120(11),BC096123(11),NM_003522(11)
BC056264 // Homo sapiens histone 1, H2bg, mRNA (cDNA clone IMAGE:6668499), partial cds. // gb // 11 // --- /// BC096120 // Homo sapiens histone cluster 1, H2bf, mRNA (cDNA clone MGC:116766 IMAGE:40002352), complete cds. // gb // 11 // --- /// BC096123 // Homo sapiens histone cluster 1, H2bf, mRNA (cDNA clone MGC:116769 IMAGE:40002357), complete cds. // gb // 11 // --- /// ENST00000359985 // cdna:known chromosome:GRCh37:6:26199748:26200942:1 gene:ENSG00000197846 // ensembl // 11 // --- /// NM_003522 // Homo sapiens histone cluster 1, H2bf (HIST1H2BF), mRNA. // refseq // 11 // ---
GENSCAN00000044913 // ensembl // 3 // Cross Hyb Matching Probes
11715119_s_at
Human Genome HG-U219 Array
Homo sapiens
20-Aug-10
Consensus sequence
Affymetrix Proprietary Database
g157278360
g157278360 /TID=g157278360 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g157278360 /REP_ORG=Homo sapiens
g157278360
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Hs.144372
February 2009 (Genome Reference Consortium GRCh37)
chr15:62455736-62457482 (-) // 90.1 // q22.2
C2 calcium-dependent domain containing 4B
C2CD4B
chr15q22.2
NM_001007595 full length
ENSG00000205502
388125
A6NLJ0
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610344
NP_001007596
NM_001007595
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0005634 // nucleus // inferred from electronic annotation
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IPR000008 // C2 // 0.12
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This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A
ENST00000380392(11),NM_001007595(11)
ENST00000380392 // cdna:known chromosome:GRCh37:15:62455737:62457482:-1 gene:ENSG00000205502 // ensembl // 11 // --- /// NM_001007595 // Homo sapiens C2 calcium-dependent domain containing 4B (C2CD4B), mRNA. // refseq // 11 // ---
GENSCAN00000044022 // ensembl // 2 // Cross Hyb Matching Probes
49386 157123 Kbytes .Supplementary data files not provided
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