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gih35 ATP-dependent RNA helicase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542874, updated on 14-Nov-2024

Summary

Official Symbol
gih35
Official Full Name
ATP-dependent RNA helicase
Primary source
PomBase:SPAC20H4.09
Locus tag
SPOM_SPAC20H4.09
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
dhx35
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Genomic context

See gih35 in Genome Data Viewer
Location:
chromosome: I
Exon count:
9
Sequence:
Chromosome: I; NC_003424.3 (2126057..2128359)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene DNA recombination mediator, RecA family ATPase Rad57/Rhp57 Neighboring gene phosphatase activator Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ubiquitin-protein ligase E4

Interactions

General gene information

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding  
enables RNA binding  
enables RNA helicase activity  
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome  
is_active_in cytosol PubMed 
is_active_in nucleus PubMed 
part_of spliceosomal complex PubMed 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2126057..2128359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019060.2NP_593629.1  ATP-dependent RNA helicase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593629.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9HE06
    Conserved Domains (5) summary
    smart00487
    Location:16208
    DEXDc; DEAD-like helicases superfamily
    smart00847
    Location:426510
    HA2; Helicase associated domain (HA2) Add an annotation
    cd00046
    Location:42179
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam00271
    Location:221356
    Helicase_C; Helicase conserved C-terminal domain
    pfam07717
    Location:569639
    OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
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