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    Vajk2 Vajk2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34811, updated on 9-Dec-2024

    Summary

    Official Symbol
    Vajk2provided by FlyBase
    Official Full Name
    Vajk2provided by FlyBase
    Primary source
    FLYBASE:FBgn0032538
    Locus tag
    Dmel_CG16885
    See related
    AllianceGenome:FB:FBgn0032538
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG16885; CG18634; Dmel\CG16885; vajk-2
    Summary
    Predicted to enable chitin binding activity. Predicted to be a structural constituent of chitin-based cuticle. Predicted to be involved in chitin-based cuticle development. Predicted to be located in chitin-based extracellular matrix. Is expressed in several structures, including adult head; embryonic dorsal epidermis; embryonic epipharynx; embryonic head epidermis; and embryonic hypopharynx. Orthologous to human ZNF512B (zinc finger protein 512B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Vajk2 in Genome Data Viewer
    Location:
    34E4-34E4; 2-50 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13932559..13934692, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13932559..13934692, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Ance-3 Neighboring gene Vajk1 Neighboring gene uncharacterized protein Neighboring gene Vajk3 Neighboring gene Nimrod A

    Genomic regions, transcripts, and products

    Interactions

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables chitin binding PubMed 
    enables structural constituent of chitin-based cuticle PubMed 
    Component Evidence Code Pubs
    located_in chitin-based extracellular matrix PubMed 

    General protein information

    Preferred Names
    Vajk2
    Names
    CG16885-PA
    Vajk2-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      13932559..13934692 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135845.4 → NP_609689.3  Vajk2 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609689.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SZM2, Q9VJV0
      Related
      FBpp0080135
      Conserved Domains (1) summary
      pfam07489
      Location:32 → 97
      Tir_receptor_C; Translocated intimin receptor (Tir) C-terminus
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