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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001174152.2 → NP_001167623.1 rab9 effector protein with kelch motifs isoform a
See identical proteins and their annotated locations for NP_001167623.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same isoform (a).
- Source sequence(s)
-
AL354710, BC053541, BC065725
- Consensus CDS
-
CCDS6862.1
- UniProtKB/Swiss-Prot
- A8K403, O00568, Q69YR2, Q6FHA4, Q6IBG7, Q6P092, Q7Z6M1, Q86Y76, Q9BWB1
- UniProtKB/TrEMBL
-
A0A024R8A0
- Related
- ENSP00000377683.4, ENST00000394125.8
- Conserved Domains (4) summary
-
- sd00038
Location:139 → 189
- Kelch; KELCH repeat [structural motif]
- pfam01344
Location:243 → 283
- Kelch_1; Kelch motif
- pfam07646
Location:31 → 76
- Kelch_2; Kelch motif
- pfam13415
Location:99 → 147
- Kelch_3; Galactose oxidase, central domain
-
NM_001174153.2 → NP_001167624.1 rab9 effector protein with kelch motifs isoform b
See identical proteins and their annotated locations for NP_001167624.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and lacks an alternate in-frame exon compared to variant 1. The resulting isoform (b) has the same N- and C-termini but is shorter compared to isoform a.
- Source sequence(s)
-
AL354710, BC047023, BC053541, BC065725
- Consensus CDS
-
CCDS55341.1
- UniProtKB/TrEMBL
- A0A0S2Z4Z1, A0A0S2Z4Z5
- Related
- ENSP00000259460.8, ENST00000259460.12
- Conserved Domains (3) summary
-
- sd00038
Location:88 → 138
- Kelch; KELCH repeat [structural motif]
- pfam01344
Location:192 → 232
- Kelch_1; Kelch motif
- pfam13415
Location:47 → 96
- Kelch_3; Galactose oxidase, central domain
-
NM_005833.4 → NP_005824.2 rab9 effector protein with kelch motifs isoform a
See identical proteins and their annotated locations for NP_005824.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (a). Variants 1 and 2 both encode the same isoform (a).
- Source sequence(s)
-
AL354710, AL445930, BC053541, CX758286
- Consensus CDS
-
CCDS6862.1
- UniProtKB/Swiss-Prot
- A8K403, O00568, Q69YR2, Q6FHA4, Q6IBG7, Q6P092, Q7Z6M1, Q86Y76, Q9BWB1
- UniProtKB/TrEMBL
-
A0A024R8A0
- Related
- ENSP00000362639.3, ENST00000373538.8
- Conserved Domains (4) summary
-
- sd00038
Location:139 → 189
- Kelch; KELCH repeat [structural motif]
- pfam01344
Location:243 → 283
- Kelch_1; Kelch motif
- pfam07646
Location:31 → 76
- Kelch_2; Kelch motif
- pfam13415
Location:99 → 147
- Kelch_3; Galactose oxidase, central domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000009.12 Reference GRCh38.p14 Primary Assembly
- Range
-
125200542..125234161
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017014177.2 → XP_016869666.1 rab9 effector protein with kelch motifs isoform X2
- UniProtKB/Swiss-Prot
- A8K403, O00568, Q69YR2, Q6FHA4, Q6IBG7, Q6P092, Q7Z6M1, Q86Y76, Q9BWB1
- UniProtKB/TrEMBL
-
A0A024R8A0
- Conserved Domains (4) summary
-
- sd00038
Location:139 → 189
- Kelch; KELCH repeat [structural motif]
- pfam01344
Location:243 → 283
- Kelch_1; Kelch motif
- pfam07646
Location:31 → 76
- Kelch_2; Kelch motif
- pfam13415
Location:99 → 147
- Kelch_3; Galactose oxidase, central domain
-
XM_005251644.5 → XP_005251701.1 rab9 effector protein with kelch motifs isoform X6
- UniProtKB/TrEMBL
-
A0A0S2Z4Z1
- Conserved Domains (3) summary
-
- sd00038
Location:39 → 92
- Kelch; KELCH repeat [structural motif]
- pfam01344
Location:146 → 186
- Kelch_1; Kelch motif
- pfam13415
Location:55 → 104
- Kelch_3; Galactose oxidase, central domain
-
XM_005251642.5 → XP_005251699.1 rab9 effector protein with kelch motifs isoform X4
- UniProtKB/TrEMBL
-
A0A0S2Z4Z1
- Conserved Domains (4) summary
-
- sd00038
Location:94 → 143
- Kelch; KELCH repeat [structural motif]
- pfam01344
Location:197 → 237
- Kelch_1; Kelch motif
- pfam07646
Location:39 → 84
- Kelch_2; Kelch motif
- pfam13415
Location:107 → 155
- Kelch_3; Galactose oxidase, central domain
-
XM_005251641.5 → XP_005251698.1 rab9 effector protein with kelch motifs isoform X3
- UniProtKB/TrEMBL
-
A0A0S2Z4Z1
- Conserved Domains (3) summary
-
- sd00038
Location:96 → 146
- Kelch; KELCH repeat [structural motif]
- pfam01344
Location:200 → 240
- Kelch_1; Kelch motif
- pfam13415
Location:55 → 104
- Kelch_3; Galactose oxidase, central domain
-
XM_005251640.6 → XP_005251697.1 rab9 effector protein with kelch motifs isoform X1
- Conserved Domains (4) summary
-
- sd00038
Location:147 → 197
- Kelch; KELCH repeat [structural motif]
- pfam01344
Location:251 → 291
- Kelch_1; Kelch motif
- pfam07646
Location:39 → 84
- Kelch_2; Kelch motif
- pfam13415
Location:107 → 155
- Kelch_3; Galactose oxidase, central domain
-
XM_017014179.2 → XP_016869668.1 rab9 effector protein with kelch motifs isoform X5
Alternate T2T-CHM13v2.0
Genomic
-
NC_060933.1 Alternate T2T-CHM13v2.0
- Range
-
137398878..137432478
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054361699.1 → XP_054217674.1 rab9 effector protein with kelch motifs isoform X6
- UniProtKB/TrEMBL
-
A0A0S2Z4Z1
-
XM_054361697.1 → XP_054217672.1 rab9 effector protein with kelch motifs isoform X4
- UniProtKB/TrEMBL
-
A0A0S2Z4Z1
-
XM_054361696.1 → XP_054217671.1 rab9 effector protein with kelch motifs isoform X3
- UniProtKB/TrEMBL
-
A0A0S2Z4Z1
-
XM_054361695.1 → XP_054217670.1 rab9 effector protein with kelch motifs isoform X1
-
XM_054361698.1 → XP_054217673.1 rab9 effector protein with kelch motifs isoform X5