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Platform GPL1342 Query DataSets for GPL1342
Status Public on Dec 16, 2004
Title 2nd 7.5K of NIA-NIH 15K Mouse cDNA set
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Mus musculus
 
Description 2nd 7.5K of NIA-NIH 15K Mouse cDNA set
pre/peri implation mouse cDNA
Ref:
Tanaka, T. S., et al. Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray. Proc.Natl.Acad.Sci.U.S.A 97: 9127-9132, 2000.
Keywords = Fob3
Keywords = Fob3b
Keywords = QTL
Keywords = congenic
 
Contributor(s) Stylianou IM, Clinton M, Pritchard C, Lallane Z, Bünger L, Bulfield G, Horvat S
Submission date Jul 12, 2004
Last update date Oct 28, 2005
Contact name Ioannis M Stylianou
E-mail(s) [email protected]
Phone 001 (207) 288 6390
Fax 001 (207) 288 6078
Organization name The Jackson Laboratory
Street address 600 Maine Street
City Bar Harbor
State/province ME
ZIP/Postal code 04609
Country USA
 
Samples (10) GSM26724, GSM26725, GSM26726, GSM26727, GSM26728, GSM26729 
Series (1)
GSE1558 Fob3b vs F-line

Data table header descriptions
ID
Meta_Row Meta_Row
Meta_Column Meta_Column
Row Row
Column Column
CLONE_ID IMAGE CLONE_ID
GB_LIST GenBank Accession Number (5'/3') GenBank Accession Number (5'/3')
GB_ACC GenBank Accession Number
SPOT_ID Column added by GEO staff to facilitate spot tracking in Entrez GEO
CLONE_VERIFIED 'Y'/'N': Was identity of the clone was verified?, 'O' for orphan clones
3PR_GB_ACC GenBank accession for the 3' sequence of the clone
3PR_VERIFIED 'Y'/'N': Was identity of the clone was verified by the 3' sequence?, 'O' for orphan clones
3PR_PUTATIVE_ID Putative ID based on BLAST search of the 3' sequence
3PR_PUTATIVE_ID_ACC GenBank accession of putative 3' ID
5PR_GB_ACC GenBank accession for the 5' sequence of the clone
5PR_VERIFIED 'Y'/'N': Was identity of the clone was verified by the 5' sequence?, 'O' for orphan clones
5PR_PUTATIVE_ID Putative ID based on BLAST search of the5'sequence
5PR_PUTATIVE_ID_ACC GenBank accession of putative 5' ID
MITOCHONDRIAL 'Y'/'N': Is the sequence mitochondrial?

Data table
ID Meta_Row Meta_Column Row Column CLONE_ID GB_LIST GB_ACC SPOT_ID CLONE_VERIFIED 3PR_GB_ACC 3PR_VERIFIED 3PR_PUTATIVE_ID 3PR_PUTATIVE_ID_ACC 5PR_GB_ACC 5PR_VERIFIED 5PR_PUTATIVE_ID 5PR_PUTATIVE_ID_ACC MITOCHONDRIAL
17281 1 1 1 1 landing light
17282 1 1 1 2 NM_008387
17283 1 1 1 3 NM_011392
17284 1 1 1 4 NM_009509
17285 1 1 1 5 NM_008600
17286 1 1 1 6 NM_010514
17287 1 1 1 7 NM_007530
17288 1 1 1 8 Z46845
17289 1 1 1 9 empty
17290 1 1 1 10 empty
17291 1 1 1 11 empty
17292 1 1 1 12 empty
17293 1 1 1 13 NM_008868
17294 1 1 1 14 NM_009880
17295 1 1 1 15 NM_011102
17296 1 1 1 16 NM_013580
17297 1 1 1 17 X57497
17298 1 1 1 18 U49720
17299 1 1 1 19 X74342
17300 1 1 1 20 landing light

Total number of rows: 17280

Table truncated, full table size 2626 Kbytes.






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