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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jan 24, 2013 |
| Title |
[Tgondiia520372] ToxoDB Toxoplasma gondii Custom GeneChip (CDF: Tgondiia520372.cdf) |
| Technology type |
in situ oligonucleotide |
| Distribution |
commercial |
| Organism |
Toxoplasma gondii |
| Manufacturer |
Affymetrix |
| Manufacture protocol |
Please see http://ancillary.toxodb.org/docs/Array-Tutorial.html for a complete description of the array design as well as for library files.
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| Submission date |
Jan 24, 2013 |
| Last update date |
Jan 24, 2013 |
| Contact name |
GEO admin |
| E-mail(s) |
[email protected]
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| Organization name |
NCBI/NLM/NIH
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| Street address |
9000 Rockville Pike
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| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
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| Samples (168)
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GSM549545, GSM549546, GSM549547, GSM549548, GSM549549, GSM549550
GSM549551, GSM549552, GSM549553, GSM549554, GSM549555, GSM549556, GSM549557, GSM549558, GSM549559, GSM549560, GSM570415, GSM570416, GSM570417, GSM570418, GSM570419, GSM570420, GSM570421, GSM570422, GSM570423, GSM570424, GSM570425, GSM570426, GSM570427, GSM570428, GSM570429, GSM570430, GSM570431, GSM570432, GSM570433, GSM570434, GSM570435, GSM570436, GSM570437, GSM570438, GSM570439, GSM570440, GSM570441, GSM570442, GSM570443, GSM570444, GSM570445, GSM570446, GSM570447, GSM570448, GSM570449, GSM570450, GSM570451, GSM570452, GSM570453, GSM570454, GSM570455, GSM570456, GSM570457, GSM570458, GSM570459, GSM570460, GSM570461, GSM570462, GSM570463, GSM570464, GSM570465, GSM570466, GSM570467, GSM570468, GSM570469, GSM570470, GSM570471, GSM570472, GSM570473, GSM570474, GSM570475, GSM570476, GSM570477, GSM570478, GSM570479, GSM570480, GSM570481, GSM570482, GSM570483, GSM570484, GSM570485, GSM618379, GSM618380, GSM618381, GSM618382, GSM618383, GSM618384, GSM802515, GSM802516, GSM802517, GSM802518, GSM802519, GSM802520, GSM802521, GSM802522, GSM802523, GSM802524, GSM802525, GSM802526, GSM802527, GSM802528, GSM886667, GSM886668, GSM886669, GSM886670, GSM886671, GSM886672, GSM886673, GSM886674, GSM886675, GSM886676, GSM886677, GSM1060448, GSM1060449, GSM1060450, GSM1060451, GSM1060452, GSM1060453, GSM1069686, GSM1069687, GSM1069688, GSM1069689, GSM1069690, GSM1069691, GSM1069692, GSM1069693, GSM1069694, GSM1069695, GSM1069696, GSM1069697, GSM1069698, GSM1069699, GSM1069700, GSM1069701, GSM1069702, GSM1069703, GSM1071270, GSM1071271, GSM1071272, GSM1071273, GSM1071274, GSM1071275, GSM1080538, GSM1080539, GSM1080540, GSM1517733, GSM1517734, GSM1517735, GSM1517736, GSM1517737, GSM1517738, GSM2467495, GSM2467496, GSM2467497, GSM2467498, GSM2467499, GSM2467500, GSM2467501, GSM2467502, GSM2467503, GSM2467504, GSM2467505
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| Series (12)
|
| GSE22100 |
Toxoplasma gondii lysine acetyltransferase GCN5-A functions in the cellular response to alkaline stress and expression of cyst genes |
| GSE23174 |
Expression data from Toxoplasma gondii mutants and wild-type during bradyzoite differentiation in vitro |
| GSE25177 |
Toxoplasma gondii response to monensin |
| GSE32427 |
Transcriptome analysis of oocyst, tachyzoite, and bradyzoite development in the type II Toxoplasma gondii strain M4. |
| GSE36300 |
Effect of AP2IX-9 overexpression on CTG transcriptome upon alkaline treatment |
| GSE43315 |
Discovery of a splicing regulator required for cell cycle progression |
| GSE43722 |
The Toxoplasma unfolded protein response |
| GSE43784 |
A nucleolar AAA-NTPase is required for Toxoplasma gondii division |
| GSE44191 |
Parasite gene expression differences between RH-ERP, RH-JSR and GT1 of Toxoplasma gondii. |
| GSE44246 |
Human foreskin fibroblasts (HFFs) infected with type I strains of Toxoplasma gondii |
| GSE61963 |
Gene expression analysis of Hammondia hammondi and Toxoplasma gondii sporulated oocysts |
| GSE94045 |
Analysis of the role for TgAP2IX-4 in regulating gene expression in Toxoplasma development |
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| Data table header descriptions |
| ID |
probe set id |
| ToxoDB_ID |
ToxoDB ID |
| GB_ACC |
GenBank Accession number |
| Description |
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| Group |
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| Sequence Type |
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| repAccession |
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| GeneName |
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| Product |
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| subcluster |
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| fullLengths |
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| subclusterSeqcount |
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| tier |
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| stackSize |
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| GeneClusterCount |
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| TranscriptCount |
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| SPOT_ID |
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| Data table |
| ID |
ToxoDB_ID |
GB_ACC |
Description |
Group |
Sequence Type |
repAccession |
GeneName |
Product |
subcluster |
fullLengths |
subclusterSeqcount |
tier |
stackSize |
GeneClusterCount |
TranscriptCount |
SPOT_ID |
| 1.m00014_at |
1.m00014 |
|
Unk|+|1222489|1224074 |
|
Unknown |
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1.m00014 |
| 10.m00080_s_at |
10.m00080 |
|
X|+|17036|17539 |
|
Unknown |
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10.m00080 |
| 10.m00081_at |
10.m00081 |
|
X|+|49730|50014 |
|
Unknown |
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|
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|
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|
|
10.m00081 |
| 100.m00002_at |
100.m00002 |
|
Unk|+|662755|663208 |
|
Unknown |
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|
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|
100.m00002 |
| 100.m00002_x_at |
100.m00002 |
|
Unk|+|662755|663208 |
|
Unknown |
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|
|
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|
|
|
100.m00002 |
| 107.m00007_s_at |
107.m00007 |
|
Unk|+|758897|759750 |
|
Unknown |
|
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|
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|
|
|
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|
107.m00007 |
| 107.m00010_at |
107.m00010 |
|
Unk|+|758095|758688 |
|
Unknown |
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|
107.m00010 |
| 108.m00006_at |
108.m00006 |
|
Unk|+|859210|859812 |
|
Unknown |
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|
108.m00006 |
| 108.m00006_x_at |
108.m00006 |
|
Unk|+|859210|859812 |
|
Unknown |
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108.m00006 |
| 113.m00001_at |
113.m00001 |
|
II|+|1533422|1537553 |
|
Unknown |
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113.m00001 |
| 113.m00009_at |
113.m00009 |
|
II|-|2114211|2123070 |
|
Unknown |
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113.m00009 |
| 113.m00012_at |
113.m00012 |
|
II|-|1813636|1821194 |
|
Unknown |
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|
113.m00012 |
| 113.m00015_at |
113.m00015 |
|
II|-|1562850|1566717 |
|
Unknown |
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113.m00015 |
| 113.m00016_at |
113.m00016 |
|
II|-|1493985|1497644 |
|
Unknown |
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113.m00016 |
| 113.m00753_at |
113.m00753 |
|
II|-|1477944|1479586 |
|
Unknown |
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|
113.m00753 |
| 113.m00755_at |
113.m00755 |
|
II|-|1499989|1501852 |
|
Unknown |
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|
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|
113.m00755 |
| 113.m00756_at |
113.m00756 |
|
II|+|1505216|1507261 |
|
Unknown |
|
|
|
|
|
|
|
|
|
|
113.m00756 |
| 113.m00757_at |
113.m00757 |
|
II|-|1517412|1518233 |
|
Unknown |
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|
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|
|
|
|
|
|
113.m00757 |
| 113.m00758_at |
113.m00758 |
|
II|-|1520151|1529608 |
|
Unknown |
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|
|
|
|
|
|
|
|
113.m00758 |
| 113.m00760_at |
113.m00760 |
|
II|-|1539560|1541775 |
|
Unknown |
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113.m00760 |
Total number of rows: 8993
Table truncated, full table size 850 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL16542_Tgondiia520372.cdf.gz |
1.5 Mb |
(ftp)(http) |
CDF |
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