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Platform GPL2057 Query DataSets for GPL2057
Status Public on Jun 29, 2005
Title Human tiling array using Nimblegen platform, set 6 of 38
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer NimbleGen
 
Description High density oligonucleotide array of Nimblegen. 50mers designed for non-repetitive regions of human genome based on UCSC HG16. There are a total of 38 arrays. This is set 6.
Keywords = Nimblegen
Keywords = human tiling array
Keywords = LICR renlab
 
Web link http://www.nimblegen.com/
Contributor(s) Kim TH, Barrera LO, Zhang M, Qu C, Singer MA, Richmond TA, Wu Y, Green RD, Ren B
Submission date May 17, 2005
Last update date Oct 27, 2010
Contact name Chunxu Qu
E-mail(s) [email protected]
Phone (858)822-5767
Organization name Ludwig Institute for Cancer Research
Department Gene Regulation
Lab RenLab
Street address
City San Diego
State/province CA
ZIP/Postal code 92093
Country USA
 
Samples (1) GSM51742
Series (1)
GSE2672 A high-resolution map of active promoters in the human genome

Data table header descriptions
ID
Probe ID probe id
Chromosome chromosome
Position position
SEQUENCE probe sequence
Comment comment

Data table
ID Probe ID Chromosome Position SEQUENCE Comment
1 CHR02P152940369 CHR2 152940369 AAAAAAAGGTGGGAAGAGGATAAAATAGTATTTTTTAAATAGTCCAGATC SET06
2 CHR02P152940469 CHR2 152940469 AAGAAGGGTTAGTCAGCGTCAAAGCTGATGGGCAGGGCTCTTCACAGATC SET06
3 CHR02P152940569 CHR2 152940569 GCCTCTCAGCAAAGTGCTCTCAGGCTGGCACAGCACTGTGGGGACACGTA SET06
4 CHR02P152940669 CHR2 152940669 CTGGTCACAAAACAGATTCTGAAAGAAAATTTTGTAACAAAAATTAGCCA SET06
5 CHR02P152940769 CHR2 152940769 TGTATTTGTGCTGGGAATCTGACTGGGGAACAGCAGTTAAGGCTGAAACC SET06
6 CHR02P152940869 CHR2 152940869 GAGTACAGACATCATAGGTGTTGAGGCAAATGAAGACACCTAATTTGACT SET06
7 CHR02P152941411 CHR2 152941411 CTCTCACCTCTAAATATTTTACAATAAAAATAGAAAAGGGAAGGAATTCA SET06
8 CHR02P152941511 CHR2 152941511 CAATATACCTTAGGAGTCTGTCACGTAGGGCAAAGAGGACAGGCCGGCCA SET06
9 CHR02P152941611 CHR2 152941611 AGGGTCGTGCTTCAAAAAATCAAAAAGCAAACAAACAAACAAAACAAAGT SET06
10 CHR02P152941711 CHR2 152941711 TCAACCATGCAGTTGGCTCCTTGCTGCTTCCTGTGGATGCAGCGATTTCT SET06
11 CHR02P152941811 CHR2 152941811 TTTATTGCTTGTCTTTGCTGCACTTCTCAGAGTTGTTCAAAGTCCTGAAC SET06
12 CHR02P152941911 CHR2 152941911 AAACAAACAGGGCGATCCACAGAACAACAGCACACGTGTGGCCTGTAATA SET06
13 CHR02P152942011 CHR2 152942011 GTGCCTGGGGGGCTGTCTGCCAACACTGGGCATGGGAGGTTTGATATTGC SET06
14 CHR02P152942111 CHR2 152942111 GAAGGTTCTGAGGAAATGCCTCTTTGGAGATGTTACTAACCTCACTTAGA SET06
15 CHR02P152942211 CHR2 152942211 CAAAATGATTATTCCAGAAATGTGAGGTAAGGGAAGAGCAGCTGGTAGCC SET06
16 CHR02P152942311 CHR2 152942311 TTGCTCTCTCAAGCTGGATAGCTGCTTGCTGTTCTCTCTCCTGTCGAATT SET06
17 CHR02P152942411 CHR2 152942411 GTAGGAATCCGCTGAACCCTGGCAAAGAAAATAGAATAGTTTCAGATGAT SET06
18 CHR02P152942511 CHR2 152942511 TTTTTCATTTGCCTAAAATTTGATGCACACACTCCATGCCTTATTGCAGA SET06
19 CHR02P152942611 CHR2 152942611 TAGCAATGTTGTGAAGAAAAATATTTTGACTAGATTAAGTGCTAGGAAGT SET06
20 CHR02P152942711 CHR2 152942711 TGCTATATTAAGCCCATATCACTTGTGAAACGTTAGTTTTCATCCATCTT SET06

Total number of rows: 389119

Table truncated, full table size 35996 Kbytes.




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