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Platform GPL2063 Query DataSets for GPL2063
Status Public on Jun 29, 2005
Title Human tiling array using Nimblegen platform, set 12 of 38
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer NimbleGen
 
Description High density oligonucleotide array of Nimblegen. 50mers designed for non-repetitive regions of human genome based on UCSC HG16. There are a total of 38 arrays. This is set 12.
Keywords = Nimblegen
Keywords = human tiling array
Keywords = LICR renlab
 
Web link http://www.nimblegen.com/
Contributor(s) Kim TH, Barrera LO, Zhang M, Qu C, Singer MA, Richmond TA, Wu Y, Green RD, Ren B
Submission date May 17, 2005
Last update date Oct 27, 2010
Contact name Chunxu Qu
E-mail(s) [email protected]
Phone (858)822-5767
Organization name Ludwig Institute for Cancer Research
Department Gene Regulation
Lab RenLab
Street address
City San Diego
State/province CA
ZIP/Postal code 92093
Country USA
 
Samples (1) GSM51805
Series (1)
GSE2672 A high-resolution map of active promoters in the human genome

Data table header descriptions
ID
Probe ID probe id
Chromosome chromosome
Position position
SEQUENCE probe sequence
Comment comment

Data table
ID Probe ID Chromosome Position SEQUENCE Comment
1 CHR04P161728529 CHR4 161728529 AGTGAAGTGCATTTGGAGGATGAAGTTCACCATGGACTTGAGCAGTAGCT SET12
2 CHR04P161728942 CHR4 161728942 AGGAGAGAGGGCTCCTTTCTAGGATATGAACAGTAGAGAGTGTTGTAAAT SET12
3 CHR04P161729042 CHR4 161729042 AAATAAATTTTTAAAAGTTCAGTTGCTTATAATAGGGCTCATGACTTACA SET12
4 CHR04P161729142 CHR4 161729142 CCCAGATCAGTCTGATCCTAAGAAAGTTAGGGAGGCTCCTGCATTTCCAG SET12
5 CHR04P161729242 CHR4 161729242 GACTCAAGGGTGAAGCAGTACATTTATGACAACATAACTACCCACTGAGT SET12
6 CHR04P161729342 CHR4 161729342 GAATATGCAGATAATTTTGAGGTCTCTGGGCCTGATGTTTCTTTTAAGTT SET12
7 CHR04P161729671 CHR4 161729671 AGGGAGGAGATGCTGATGTTCTCTATGTAGGAAGGGAAGAGATAATGACT SET12
8 CHR04P161730008 CHR4 161730008 CTTTCAGAGAAGGCCACATATAAGCCAAGATTTGACCAAAGCAGGAGTCA SET12
9 CHR04P161730240 CHR4 161730240 CAAAAAAACACTTTTTACCAACTTCTGGATTAAAGTAAATGGTCAAGCCA SET12
10 CHR04P161731226 CHR4 161731226 ATGATCCAAATATGTCTGTTTTTTTGGGGGGATAGAATGAGCAAGTCAGT SET12
11 CHR04P161731497 CHR4 161731497 GTGGCTTCAAGATGATGCTGTTGCCCTCCACCAGTGGGCAAGAGCAGGAC SET12
12 CHR04P161731597 CHR4 161731597 TATTCATTCTATCACTCAGATGCAGTGACATGAGTCCACCTAGAAGGAAG SET12
13 CHR04P161731697 CHR4 161731697 TCATCAGCTTTATATTTTAGGGAGAAAGCACAAATCTTTGCCTACCACCA SET12
14 CHR04P161732383 CHR4 161732383 TCATAGCAATCTTCTATAAGGCAAGCACTACAGTCAATGTATGCGGTGCT SET12
15 CHR04P161732483 CHR4 161732483 ATTAAGATATGGGTGGTGCATTATTTTACCAACATCATGATACTGGACTT SET12
16 CHR04P161732583 CHR4 161732583 TTTTTACTACCCCACATCCTATTTCTGACTTTAGTATCATTCATTACCTT SET12
17 CHR04P161732690 CHR4 161732690 TTAAGCAAGTTTTTTGAACATGGCTTCTCTGATGTCTTTACTTTTTAAAT SET12
18 CHR04P161732790 CHR4 161732790 AAATATTTTGACAGGAATTTTTACTACAATACAAAGAGAACAATAGAAAA SET12
19 CHR04P161732890 CHR4 161732890 CTAAAATGGCAGTCCAATACTGATCTGTCAGGCATAGAGTTTAGTGGGAA SET12
20 CHR04P161732990 CHR4 161732990 TCAATTGACTGTTCACTCAAAATGCCCAGAATTGCTGTAATGGGAACTGG SET12

Total number of rows: 389199

Table truncated, full table size 35733 Kbytes.




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Supplementary data files not provided
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