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Platform GPL2065 Query DataSets for GPL2065
Status Public on Jun 29, 2005
Title Human tiling array using Nimblegen platform, set 14 of 38
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer NimbleGen
 
Description High density oligonucleotide array of Nimblegen. 50mers designed for non-repetitive regions of human genome based on UCSC HG16. There are a total of 38 arrays. This is set 14.
Keywords = Nimblegen
Keywords = human tiling array
Keywords = LICR renlab
 
Web link http://www.nimblegen.com/
Contributor(s) Kim TH, Barrera LO, Zhang M, Qu C, Singer MA, Richmond TA, Wu Y, Green RD, Ren B
Submission date May 17, 2005
Last update date Oct 27, 2010
Contact name Chunxu Qu
E-mail(s) [email protected]
Phone (858)822-5767
Organization name Ludwig Institute for Cancer Research
Department Gene Regulation
Lab RenLab
Street address
City San Diego
State/province CA
ZIP/Postal code 92093
Country USA
 
Samples (1) GSM51738
Series (1)
GSE2672 A high-resolution map of active promoters in the human genome

Data table header descriptions
ID
Probe ID probe id
Chromosome chromosome
Position position
SEQUENCE probe sequence
Comment comment

Data table
ID Probe ID Chromosome Position SEQUENCE Comment
1 CHR05P119024492 CHR5 119024492 GCTAAGGCTTATGGATGGTCTTCAGGTTGGGGATAGAAGAGTCCTAGTTA SET14
2 CHR05P119025185 CHR5 119025185 CATCTCAGCAACTGCTGGATTATCTTTCCAGGCTTTGCCTCCACCTCAAT SET14
3 CHR05P119025285 CHR5 119025285 TGGATGGCAGGAGATGGAAAGAATCCACAGTGATAGAGCAGTTGCTTTGT SET14
4 CHR05P119025385 CHR5 119025385 CACACACCTGCTTTAGACTGTGGGAACTAGGAGGCCCAGAGACTACAACA SET14
5 CHR05P119025485 CHR5 119025485 TTCTTAGAAATGTTATTTGACAATGATGTTATCAGGTATTAAATATTGTC SET14
6 CHR05P119025585 CHR5 119025585 TAAAACTTGTGGCTGCTTCCTTTCTCTGGAGGAAGACAGAACTTGAGTCA SET14
7 CHR05P119025685 CHR5 119025685 AACCAATAAAAAGGTTCCACACATCCAAGCAGTCTTAAAAATTACCCACA SET14
8 CHR05P119025785 CHR5 119025785 TCAGATACTCTTAAGCTTCTCTGACCCCTTTCTACCCACTAAAGAACTGA SET14
9 CHR05P119025885 CHR5 119025885 GTGACAAACAGTAAGTATTCCAGCAAAAGGAGTAGGAGGTTGACCACTTT SET14
10 CHR05P119025985 CHR5 119025985 AGTGACCTCAGTTATTGCATCTAGGAACAAGTTTCTCTCTAATCATTTAT SET14
11 CHR05P119026085 CHR5 119026085 AGCATGGGATTTGCCAGCAATTCATATTCCCCCTATCACTGTGGATACAC SET14
12 CHR05P119026185 CHR5 119026185 CCATTTACTTTCATGGATTGATGTCAAGGGTTCAGGTCCATGGAGATTTT SET14
13 CHR05P119026285 CHR5 119026285 TCCTTTTGGGCCAGGAGTTTTCCTAGGCACCAGCAATCATCTGAGCCTGC SET14
14 CHR05P119026385 CHR5 119026385 TCTGATGGGAAGGTTTCCTTTACAATTGTGCGTTTTATCCAAATCTCTGG SET14
15 CHR05P119026485 CHR5 119026485 GAATCTCTGTTCTACTGAACAGTAATAATGTCTGTTAACATTATTAATTT SET14
16 CHR05P119026585 CHR5 119026585 TTCATACAGGCACACCATCTCAGGAAGATCTAGTCTGTTGCAAATTTACG SET14
17 CHR05P119026685 CHR5 119026685 CTAACCAGATACTATTCCCTCTCTTCCCTGTTTCCATACCTTTTATTCCA SET14
18 CHR05P119026785 CHR5 119026785 CATTGGTTGATAATGGTTTAAATTAAGGTATCACTTCTCACAAAAGTACT SET14
19 CHR05P119026885 CHR5 119026885 CCATGGTTAAATTTTAGGCAGTGGAAAAAATAGTTTTTGGTAAAGATAAA SET14
20 CHR05P119026985 CHR5 119026985 ATACGTGGGTATGGTGACAGGCCTGACAAATCCCTCCTTTTACAGATAAA SET14

Total number of rows: 382520

Table truncated, full table size 35253 Kbytes.




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