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Platform GPL2082 Query DataSets for GPL2082
Status Public on Jun 29, 2005
Title Human tiling array using Nimblegen platform, set 31 of 38
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer NimbleGen
 
Description High density oligonucleotide array of Nimblegen. 50mers designed for non-repetitive regions of human genome based on UCSC HG16. There are a total of 38 arrays. This is set 31.
Keywords = Nimblegen
Keywords = human tiling array
Keywords = LICR renlab
 
Web link http://www.nimblegen.com/
Contributor(s) Kim TH, Barrera LO, Zhang M, Qu C, Singer MA, Richmond TA, Wu Y, Green RD, Ren B
Submission date May 17, 2005
Last update date Oct 27, 2010
Contact name Chunxu Qu
E-mail(s) [email protected]
Phone (858)822-5767
Organization name Ludwig Institute for Cancer Research
Department Gene Regulation
Lab RenLab
Street address
City San Diego
State/province CA
ZIP/Postal code 92093
Country USA
 
Samples (1) GSM51807
Series (1)
GSE2672 A high-resolution map of active promoters in the human genome

Data table header descriptions
ID
Probe ID probe id
Chromosome chromosome
Position position
SEQUENCE probe sequence
Comment comment

Data table
ID Probe ID Chromosome Position SEQUENCE Comment
1 CHR15P055926344 CHR15 55926344 CTTGAGGAATAGCCACATAAATGGTTTCCACCAAAGAGTATGGGACCTGA SET31
2 CHR15P055926444 CHR15 55926444 GACAGTGGCGCCACACACTATCCAGTTTGTGCAAGTCAGAAACCTCCTCC SET31
3 CHR15P055926916 CHR15 55926916 TAACCTGGAACAGGTCCCTCCTTTCTGTGGCACAGCGATTCTCCCTTAGA SET31
4 CHR15P055927016 CHR15 55927016 AGCTTCCAGGGTCCGCTGCTGGTCTGCAGTCTTCACCCTCCATAATAATT SET31
5 CHR15P055927116 CHR15 55927116 ATCTCCTAGTAGCTCCAATACCTCCTGACCACCATGTCTGCTTGCCACAC SET31
6 CHR15P055927216 CHR15 55927216 GGTTCAAGGGAACATCCCAAAACTGTACCCAATGGAAGAACAAGGAGTTC SET31
7 CHR15P055927316 CHR15 55927316 AGGGCTTCACACTGGTCTTTGAATGGATGGTCCCCACCCCTTCAACCCTT SET31
8 CHR15P055927416 CHR15 55927416 TCCCAACATCCAAAGCCCAGCCCCCACTCCTCAGGACCCTCACCCCCTTA SET31
9 CHR15P055927516 CHR15 55927516 CAGATGCTAATGGGCTATTCCTCTGCTGCTTCTCTCTCAGAGGGGCAGTG SET31
10 CHR15P055927616 CHR15 55927616 GTCTCTGTTCTCTGGGGGATGCCTGTCACTAGTTTCCTTTTGAGTTACCT SET31
11 CHR15P055927716 CHR15 55927716 TCTAGTTCATGAAGAAAGCCTTTAAAAAATTTACATGACCCTGACCTTGT SET31
12 CHR15P055927816 CHR15 55927816 ATACAATGTACATATATTTGCCTACTTTCTGACCGTGTTCATTATAAACA SET31
13 CHR15P055927916 CHR15 55927916 ACCTGTTCAGGATGGAAGGCACTGCCTCCATATAGTTTTCTCTGATGCTT SET31
14 CHR15P055928016 CHR15 55928016 CTCTCCATGGGCATGCTTTTCCTTTAGACTGGAATATTGCTTCTTCCCCA SET31
15 CHR15P055929013 CHR15 55929013 TATTAGGCCTTCCCTCTTATCTAGGTCAGAACTCACTGTATAAACCCTCA SET31
16 CHR15P055929234 CHR15 55929234 TAGTGACCATCTGCCTTGCTCCTTCCACCCATGGGAAATCACCGTTTGAA SET31
17 CHR15P055929398 CHR15 55929398 CTAGTTATGTGCTGTGCTAGCAAAATGTCTACAGATGAGTCAGAAATGCC SET31
18 CHR15P055929498 CHR15 55929498 AATACAGACCACACCAAACTGAGCCAAAGCAGTCATCCTTCTGAAGATGT SET31
19 CHR15P055929616 CHR15 55929616 TATATGATGGGATCCTGGAGGGACCTCAGAACACATCAGGGGTCTCCAAG SET31
20 CHR15P055929716 CHR15 55929716 TAGGAGATGTTTGTGTAAGATACATTTGCCTCATCATTATTTCTTGGGAA SET31

Total number of rows: 389199

Table truncated, full table size 35956 Kbytes.




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