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Platform GPL2083 Query DataSets for GPL2083
Status Public on Jun 29, 2005
Title Human tiling array using Nimblegen platform, set 32 of 38
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer NimbleGen
 
Description High density oligonucleotide array of Nimblegen. 50mers designed for non-repetitive regions of human genome based on UCSC HG16. There are a total of 38 arrays. This is set 32.
Keywords = Nimblegen
Keywords = human tiling array
Keywords = LICR renlab
 
Web link http://www.nimblegen.com/
Contributor(s) Kim TH, Barrera LO, Zhang M, Qu C, Singer MA, Richmond TA, Wu Y, Green RD, Ren B
Submission date May 17, 2005
Last update date Oct 27, 2010
Contact name Chunxu Qu
E-mail(s) [email protected]
Phone (858)822-5767
Organization name Ludwig Institute for Cancer Research
Department Gene Regulation
Lab RenLab
Street address
City San Diego
State/province CA
ZIP/Postal code 92093
Country USA
 
Samples (1) GSM51758
Series (1)
GSE2672 A high-resolution map of active promoters in the human genome

Data table header descriptions
ID
Probe ID probe id
Chromosome chromosome
Position position
SEQUENCE probe sequence
Comment comment

Data table
ID Probe ID Chromosome Position SEQUENCE Comment
1 CHR16P029867022 CHR16 29867022 CCTGGCCTTTCAATATTATCTAGATCTGCATCCCTCTACTACCATGTACA SET32
2 CHR16P029868441 CHR16 29868441 AGTGAGGTCCAGGCAGGTATGGTGTACACCACCTCCATCCCTTCCATGTA SET32
3 CHR16P029868541 CHR16 29868541 GCCCGCCTGGACAAGGTGCTGTCGGACATGAAGAGACACAAGAAGCTGGA SET32
4 CHR16P029868641 CHR16 29868641 ACCCCAGCCCCGCCAGCCCCCCACTCCGATCCTCCGGGAGTAGTCTCTTC SET32
5 CHR16P029868741 CHR16 29868741 TGTCCGTACCTGCTGGAGCCTGGGCCCTCCTTCCCCAGCCCAGACATTGA SET32
6 CHR16P029868841 CHR16 29868841 GGAAAGAGGAAGAGAGAGTGTGAGTGTGTGTGTGTGTTTTTTCTATTGAA SET32
7 CHR16P029868941 CHR16 29868941 TGTGTGTGTTTTCTATTGAACATCTATATAGAGAGAGTGTGTGAGTGTGT SET32
8 CHR16P029869041 CHR16 29869041 GAAATAAAAGATGCAGAGCTATCATCTCTTAAAAGGAGGGGCTGTAGCTG SET32
9 CHR16P029869141 CHR16 29869141 CCAGATTGGAAAATGAAAGCCAGATGGGTAGAGGTGCCCTCAGTTAGCAC SET32
10 CHR16P029869241 CHR16 29869241 CAGCTGGCTCCAAGGTAGAAACCCATGAGCACTCAGGGAGCAGTGTGCCT SET32
11 CHR16P029869341 CHR16 29869341 CGGGCCCTTTAACTCCCAAGCCCCACCCCTGGGCTTGGCCTGCCTTGCCC SET32
12 CHR16P029869441 CHR16 29869441 TTGTTGCAGCTACCTGCACTTCTAGATGTGAGTACATTGTACTAGCCCCC SET32
13 CHR16P029869541 CHR16 29869541 TCCTGTCTTGCTTTGAAGGGCCTTGCTTCTGCTGGGGCAGGGAAAACATG SET32
14 CHR16P029869641 CHR16 29869641 TTTCACTTTCCAATAGTTGGGAGTCTTCTGGGTTTTGAAGTAAAGGCAGA SET32
15 CHR16P029869741 CHR16 29869741 TGACTTCAGGGTCCCACCTGGGAAATCAGGTGGGGAACCTTACAGGGTCA SET32
16 CHR16P029869841 CHR16 29869841 TGTCCTGGGGACCTGGGCTCTGGCCTGTCACCTTGAGCTCCAAGAATGTG SET32
17 CHR16P029869941 CHR16 29869941 CCTCCATGCAGGGCTGGGCCAGCTGTTGGTCTCAGTCGATCATTCAGGAA SET32
18 CHR16P029870041 CHR16 29870041 CTTTCCTTTTTGGGAGGAGAAAGTGAAAACTAGGATGCTCAGCTGGACCC SET32
19 CHR16P029870141 CHR16 29870141 ACTTGGGGGTGGAGGTGATAGCGAGGCTGATGGCCCCTGTGTTCTCAGCT SET32
20 CHR16P029870241 CHR16 29870241 GGGTATCAGGTGGCTCTGCCAGAAACTCCCTTGGCACACAGAGCACTGGG SET32

Total number of rows: 389199

Table truncated, full table size 35964 Kbytes.




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Supplementary data files not provided
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