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Platform GPL2084 Query DataSets for GPL2084
Status Public on Jun 29, 2005
Title Human tiling array using Nimblegen platform, set 33 of 38
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer NimbleGen
 
Description High density oligonucleotide array of Nimblegen. 50mers designed for non-repetitive regions of human genome based on UCSC HG16. There are a total of 38 arrays. This is set 33.
Keywords = Nimblegen
Keywords = human tiling array
Keywords = LICR renlab
 
Web link http://www.nimblegen.com/
Contributor(s) Kim TH, Barrera LO, Zhang M, Qu C, Singer MA, Richmond TA, Wu Y, Green RD, Ren B
Submission date May 17, 2005
Last update date Oct 27, 2010
Contact name Chunxu Qu
E-mail(s) [email protected]
Phone (858)822-5767
Organization name Ludwig Institute for Cancer Research
Department Gene Regulation
Lab RenLab
Street address
City San Diego
State/province CA
ZIP/Postal code 92093
Country USA
 
Samples (1) GSM51808
Series (1)
GSE2672 A high-resolution map of active promoters in the human genome

Data table header descriptions
ID
Probe ID probe id
Chromosome chromosome
Position position
SEQUENCE probe sequence
Comment comment

Data table
ID Probe ID Chromosome Position SEQUENCE Comment
1 CHR17P027613602 CHR17 27613602 ACACGGGCAGGCCCACTTACTGCCCCACTGCCATCAGCACACAGGGGACA SET33
2 CHR17P027613702 CHR17 27613702 GACGCCAGGGACTGCACAGGCAGAGAGGAGGGTGGGGTGGGCCTCAGCCC SET33
3 CHR17P027613802 CHR17 27613802 TGAAAAGCCAGTGTTTCTTGTGAAGAGAAATCCTGGCCTGGCTCTCCAGT SET33
4 CHR17P027613902 CHR17 27613902 AATGGGAGCTGGAGAACAGAATGTCAAGGGGCCAAAAGACAGGGAGAGCA SET33
5 CHR17P027614010 CHR17 27614010 TCTTTAGGAAAAAAAAAAAATGGGGTGGGGGTGGTGCTAGGAAGCCCTGA SET33
6 CHR17P027614110 CHR17 27614110 CTGGCCAGCTCTAAGGGCCATTGGTTCTATACATTGTCTGACTTTCTCCA SET33
7 CHR17P027614210 CHR17 27614210 CCTACCTGCCATGCGCTGTCCAAGTCTCACTGTCATATAGTCACATACAC SET33
8 CHR17P027614310 CHR17 27614310 CCCCCCAGGGGAAGCATCTGGCCCTTCTGAAGCACGTGCAGTGTCACAGG SET33
9 CHR17P027614879 CHR17 27614879 TGCAAGACTCTAAGGCCAGCATAAGGCCTAGCACAGAAATGTCCATTTGT SET33
10 CHR17P027616122 CHR17 27616122 TTAATACATTTTAACTATTATTATCTACCTATGATCATAAGCGGGGGAAA SET33
11 CHR17P027616222 CHR17 27616222 TAAGGGATAAAAGATTTAAGTCATTTTCTAAATTCTATACTATTTATAAT SET33
12 CHR17P027616322 CHR17 27616322 AATTCATCTCAAAGATCTCACACTCTGAGCTTTCCTTCTTGAACCCAATC SET33
13 CHR17P027616422 CHR17 27616422 CTCCTGACTTCCTGGCCTGGCTACAGCAGCCTGGCTTCTGCCCCACCAAT SET33
14 CHR17P027616522 CHR17 27616522 GAAGCCTTGCATATGCCTATATTAGGAAGGCCAGATGCCCTTTGTGGCCA SET33
15 CHR17P027616622 CHR17 27616622 GTCACTCGTCTGTCAGTGTGCCTGTCTCCACTCAGCTTCACATGCAACTA SET33
16 CHR17P027616722 CHR17 27616722 GTCCATTTCTTTGATGAGTCTAACTGATGGCTCCAGAGGCCATGTGGACA SET33
17 CHR17P027616822 CHR17 27616822 CAGCTGGAAGCTATAATCTGGCCCCTCCTCAGACTTTACTTTCACTTTTC SET33
18 CHR17P027616922 CHR17 27616922 CCCTTGTCACCACCAGAGCCATTCCTTACGAATGTGTCTCTACCTTGGCT SET33
19 CHR17P027617291 CHR17 27617291 CATAAACCATAGCACTCACTGTCCACACCTGAACACATTACATACATACG SET33
20 CHR17P027617391 CHR17 27617391 CACTATGTGGGGTTAGATTCCAAAGTCAGCACGTAAGGCAAAAATAGAAT SET33

Total number of rows: 389199

Table truncated, full table size 35962 Kbytes.




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