NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL2087 Query DataSets for GPL2087
Status Public on Jun 29, 2005
Title Human tiling array using Nimblegen platform, set 36 of 38
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer NimbleGen
 
Description High density oligonucleotide array of Nimblegen. 50mers designed for non-repetitive regions of human genome based on UCSC HG16. There are a total of 38 arrays. This is set 36.
Keywords = Nimblegen
Keywords = human tiling array
Keywords = LICR renlab
 
Web link http://www.nimblegen.com/
Contributor(s) Kim TH, Barrera LO, Zhang M, Qu C, Singer MA, Richmond TA, Wu Y, Green RD, Ren B
Submission date May 17, 2005
Last update date Oct 27, 2010
Contact name Chunxu Qu
E-mail(s) [email protected]
Phone (858)822-5767
Organization name Ludwig Institute for Cancer Research
Department Gene Regulation
Lab RenLab
Street address
City San Diego
State/province CA
ZIP/Postal code 92093
Country USA
 
Samples (1) GSM51804
Series (1)
GSE2672 A high-resolution map of active promoters in the human genome

Data table header descriptions
ID
Probe ID probe id
Chromosome chromosome
Position position
SEQUENCE probe sequence
Comment comment

Data table
ID Probe ID Chromosome Position SEQUENCE Comment
1 CHR20P047709570 CHR20 47709570 CCTGGTATCGGGACCGCAGGTTCTAATTCACATCTCACCTGGGAATGGCA SET36
2 CHR20P047709670 CHR20 47709670 GGTGGTAAGGCTTAAGAGCAAACACTTGCCTTGCTAGTTCAGCAAGAATC SET36
3 CHR20P047710295 CHR20 47710295 ACGGAAACCATGATCTCTTCCCCAAGATTGCTCAGAGGTATCCACTTGTC SET36
4 CHR20P047710395 CHR20 47710395 AATTCAGACAAATTCCAGGTTGGCTGAAGCATTCAAAGCTAAATCCAGAA SET36
5 CHR20P047710495 CHR20 47710495 AACAGCTGGCTGCCAGGGATTCTGGGTAAGTGTAGCACCCCAGAGGCAAC SET36
6 CHR20P047710935 CHR20 47710935 CGGTTGAGATATCCAGAGTAATTCTTTAATTGTATTCAGTTTATTTTTCA SET36
7 CHR20P047711035 CHR20 47711035 CGGGGATTGCCATTGTGTCTTTTTTGCTACTGCCCATGTAGCCAGGTATG SET36
8 CHR20P047711135 CHR20 47711135 CTGTTCAGGAGACATGGCTCCCTGCAACCCCCGGCCAAGTCCTGGATGCC SET36
9 CHR20P047711235 CHR20 47711235 CACAAGTCGACAGACTGATGTGACTGTATGCAGCGCTGAGCACAACAGCC SET36
10 CHR20P047711335 CHR20 47711335 GAAATAATGGGCCACTGTGGCTTTTTAAAGAGATATGATTTATCTCTGGG SET36
11 CHR20P047711435 CHR20 47711435 GCGAGGAGGCTTTCACACCTTGGCTTGTCTGCAGACGGAGGACAGCTGGG SET36
12 CHR20P047711535 CHR20 47711535 GAGAAGCAGCCAACTCTGCACCCTGAGGAGGGTGGAGATTTGGAGAATTT SET36
13 CHR20P047711635 CHR20 47711635 GTGGAATCTTTGCAGGCAGGGTCATGTGGTTTGGCCGCCTTCATTACTCA SET36
14 CHR20P047711735 CHR20 47711735 AAACAGCTGCACACCCACAAATCCCTTTAGCCAGTTAATTGGACCATGAC SET36
15 CHR20P047711835 CHR20 47711835 GATGATCACGCGCTCCCTGGATGGTGCCCAGCTCTCTGGCTGCTCATCCT SET36
16 CHR20P047711935 CHR20 47711935 TGCAGAACAGGCGGCTACTAGGGATTCTGGGTAAGTGTGGCCTTCTATTT SET36
17 CHR20P047712188 CHR20 47712188 GAGAATCTGGAATAAGGCAACGTCCCCCCGGAGATGCCACCATGCCTGGG SET36
18 CHR20P047712288 CHR20 47712288 AGTGGTCACCCTACCCAGCAACCACCTGCACAGGTATACATTCCAGGTCG SET36
19 CHR20P047713098 CHR20 47713098 GTTGAGGCTGAAACTTCATCGGCCCCTTGGGAAACCTCCAGCCTCCCAGA SET36
20 CHR20P047713198 CHR20 47713198 GTGGGCCTTTCCCACCTCCACGTGGGGCCATTTCCTTCAGCCTAATTCAC SET36

Total number of rows: 389183

Table truncated, full table size 36016 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap