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Platform GPL24853 Query DataSets for GPL24853
Status Public on Aug 30, 2018
Title Neisseria meningitidis Molecular biology Lab, AIMB, GSK Vaccines Protein Microarray
Technology type spotted peptide or protein
Distribution non-commercial
Organism Neisseria meningitidis
Manufacturer Molecular biology Lab, AIMB, GSK Vaccines
Manufacture protocol Purified recombinant proteins were diluted at final concentration of 0.5 mg/ul in 40% glycerol and transferred into 384-well microtiterplates. One droplet of 0.2 nL protein solution was deposited per spot on nitrocellulose-coated slides (FAST slides, Schleicher and Schuell) using the non-contact printer Marathon Spotter (Arrayjet, Edinburgh, UK). Printing was performed in a cabinet with controlled humidity and temperature (55-60% and 12 °C respectively), resulting in spots of 90-110 μm in diameter range. Each protein was printed in 8 replicates on each slide. Printed protein microarrays were kept at room temperature for 5 hours, dried under a stream of nitrogen and store a 4°C.
 
 
Submission date Apr 05, 2018
Last update date Aug 30, 2018
Contact name Erika Bartolini
Organization name GSK Vaccines
Department AIMB
Lab Molecular Biology
Street address Via Fiorentina 1
City Siena
State/province Italy
ZIP/Postal code 53100
Country Italy
 
Samples (1) GSM3082892
Series (1)
GSE112752 Protein microarray epitope mapping of monoclonal antibody 5H2 raised by human immunization with the 4CMenB vaccine formulation containing the fusion antigen NHBA-NMB1030.

Data table header descriptions
ID
Name common protein name
aminoacid region the aminoacid region of NHBA long and short peptide variants (p2, p3, p5, p10, p17, p20, p21, p24, p29) spotted on the protein array
SPOT_ID sequence accession number

Data table
ID Name aminoacid region SPOT_ID
[102] NHBAp2 full lenght gi|254547343|ref|ACT66702.1
[111] NHBAp2 full lenght gi|254547343|ref|ACT66702.1
[168] NHBAp2 1-470 gi|254547343|ref|ACT66702.1
[169] NHBAp2 192-240 gi|254547343|ref|ACT66702.1
[170] NHBAp2 204-486 gi|254547343|ref|ACT66702.1
[171] NHBAp2 228-315 gi|254547343|ref|ACT66702.1
[172] NHBAp2 270-318 gi|254547343|ref|ACT66702.1
[174] NHBAp2 400-520 gi|254547343|ref|ACT66702.1
[176] NHBAp2 420-498 gi|254547343|ref|ACT66702.1
[177] NHBAp2 520-568 gi|254547343|ref|ACT66702.1
[179] NHBAp2 84-151 gi|254547343|ref|ACT66702.1
[181] NHBAp2 351-466 gi|254547343|ref|ACT66702.1
[183] NHBAp2 159-255 gi|254547343|ref|ACT66702.1
[193] NHBAp20 full lenght gi|7228672|ref|AAF42570.1
[195] NHBAp21 full lenght gi|504394500|ref|WP_014581602.1
[196] NHBAp17 full lenght gi|645201933|ref|WP_025458874.1
[197] NHBAp3 full lenght gi|7228704|ref|AAF42586.1
[198] NHBAp2 1-287 gi|254547343|ref|ACT66702.1
[200] NHBAp2 181-470 gi|254547343|ref|ACT66702.1
[201] NHBAp2 286-470 gi|254547343|ref|ACT66702.1

Total number of rows: 48

Table truncated, full table size 2 Kbytes.




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