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Series GSE112752 Query DataSets for GSE112752
Status Public on Aug 30, 2018
Title Protein microarray epitope mapping of monoclonal antibody 5H2 raised by human immunization with the 4CMenB vaccine formulation containing the fusion antigen NHBA-NMB1030.
Platform organism Neisseria meningitidis
Sample organism Homo sapiens
Experiment type Protein profiling by protein array
Summary The aim of the study was to determine the epitope targeted by 5H2 human Fab directed against NHBA and the crossreactivity aginst a panel of nine different NHBA long and short peptide variants (p2, p3, p5, p10, p17, p20, p21, p24, p29). 5H2 were diluted at 1:2000 and incubated on a non-commercial Protein Microarray platform printed with NHBAp2 specific recombinant protein fragments and full length NHBA of different variants.
 
Overall design A panel of recombinant fragments of different length spanning the entire sequence of NHBAp2 and NHBAp3 plus different nine different NHBA long and short peptide variants (p2, p3, p5, p10, p17, p20, p21, p24, p29) were printed in 8 replicates on a no-commercial Protein Microarray. All fragments were expressed in E. coli as either glutathione S-transferase-, His-tagged or TRX-fusions, purified from the cytoplasmic fraction as soluble forms. Human IgG (at 8 different concentration points) was distributed in each array copy as control. HuFab 5H2 was profiled for anti-Human IgG specific analysis of reactivity to the spotted proteins.
 
Contributor(s) Bartolini E
Citation(s) 30133484
Submission date Apr 05, 2018
Last update date Sep 01, 2018
Contact name Erika Bartolini
Organization name GSK Vaccines
Department AIMB
Lab Molecular Biology
Street address Via Fiorentina 1
City Siena
State/province Italy
ZIP/Postal code 53100
Country Italy
 
Platforms (1)
GPL24853 Neisseria meningitidis Molecular biology Lab, AIMB, GSK Vaccines Protein Microarray
Samples (1)
GSM3082892 5H2 Fab-anti-NHBA
Relations
BioProject PRJNA448900

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE112752_RAW.tar 210.0 Kb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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