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Status
Public on Aug 17, 2006
Title
Agilent-014810 Yeast Whole Genome ChIP-on-Chip Microarray 4x44K (G4493A)
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Saccharomyces cerevisiae Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Catalog number
G4493A
Description
Submission date
Aug 17, 2006
Last update date
Feb 15, 2018
Organization
Agilent Technologies
E-mail(s)
[email protected] Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (802)
GSM154072 , GSM154074 , GSM154075 , GSM154076 , GSM154079 , GSM154080
GSM154082 ,
GSM154083 ,
GSM205783 ,
GSM205786 ,
GSM205799 ,
GSM205821 ,
GSM234991 ,
GSM235050 ,
GSM235051 ,
GSM235054 ,
GSM274176 ,
GSM274178 ,
GSM274179 ,
GSM274180 ,
GSM274181 ,
GSM274182 ,
GSM274189 ,
GSM274190 ,
GSM274191 ,
GSM274192 ,
GSM274193 ,
GSM274194 ,
GSM274195 ,
GSM274196 ,
GSM274401 ,
GSM274611 ,
GSM274612 ,
GSM274613 ,
GSM274614 ,
GSM274615 ,
GSM274616 ,
GSM274617 ,
GSM274618 ,
GSM274619 ,
GSM287251 ,
GSM287276 ,
GSM287287 ,
GSM322952 ,
GSM322954 ,
GSM339147 ,
GSM339148 ,
GSM339149 ,
GSM339150 ,
GSM339151 ,
GSM339152 ,
GSM339153 ,
GSM339154 ,
GSM339155 ,
GSM339156 ,
GSM339157 ,
GSM339158 ,
GSM339159 ,
GSM339161 ,
GSM339164 ,
GSM339165 ,
GSM339169 ,
GSM339171 ,
GSM339172 ,
GSM339175 ,
GSM339176 ,
GSM339180 ,
GSM339182 ,
GSM339185 ,
GSM339186 ,
GSM339187 ,
GSM339188 ,
GSM339189 ,
GSM339190 ,
GSM339191 ,
GSM339192 ,
GSM339193 ,
GSM339194 ,
GSM339195 ,
GSM339196 ,
GSM339197 ,
GSM339198 ,
GSM339199 ,
GSM339200 ,
GSM339201 ,
GSM339202 ,
GSM339203 ,
GSM339204 ,
GSM339205 ,
GSM339206 ,
GSM339207 ,
GSM339208 ,
GSM339209 ,
GSM339210 ,
GSM339211 ,
GSM339212 ,
GSM339213 ,
GSM339214 ,
GSM404935 ,
GSM405144 ,
GSM405145 ,
GSM405185 ,
GSM405186 ,
GSM405187 ,
GSM405484 ,
GSM405485 ,
GSM405486 ,
GSM405487 ,
GSM405488 ,
GSM405489 ,
GSM421472 ,
GSM421473 ,
GSM421474 ,
GSM421475 ,
GSM421476 ,
GSM428220 ,
GSM428221 ,
GSM428222 ,
GSM428223 ,
GSM428224 ,
GSM428225 ,
GSM428226 ,
GSM428227 ,
GSM428228 ,
GSM428229 ,
GSM428230 ,
GSM428231 ,
GSM428232 ,
GSM428233 ,
GSM428234 ,
GSM428235 ,
GSM428236 ,
GSM428237 ,
GSM428238 ,
GSM428239 ,
GSM428240 ,
GSM428241 ,
GSM428242 ,
GSM428243 ,
GSM428244 ,
GSM428245 ,
GSM428246 ,
GSM428247 ,
GSM428248 ,
GSM428249 ,
GSM428250 ,
GSM428251 ,
GSM428252 ,
GSM428253 ,
GSM428254 ,
GSM428255 ,
GSM428256 ,
GSM428257 ,
GSM428258 ,
GSM428259 ,
GSM428260 ,
GSM428261 ,
GSM428262 ,
GSM428263 ,
GSM428264 ,
GSM428265 ,
GSM428266 ,
GSM428267 ,
GSM428268 ,
GSM428269 ,
GSM428270 ,
GSM428271 ,
GSM428272 ,
GSM428273 ,
GSM428274 ,
GSM428275 ,
GSM428276 ,
GSM428277 ,
GSM436669 ,
GSM436670 ,
GSM436671 ,
GSM436672 ,
GSM436673 ,
GSM436674 ,
GSM436675 ,
GSM436676 ,
GSM436677 ,
GSM436678 ,
GSM436679 ,
GSM436680 ,
GSM454823 ,
GSM454824 ,
GSM454825 ,
GSM454826 ,
GSM454827 ,
GSM454828 ,
GSM454829 ,
GSM454830 ,
GSM454831 ,
GSM454832 ,
GSM454833 ,
GSM454834 ,
GSM454835 ,
GSM454836 ,
GSM454837 ,
GSM454838 ,
GSM454839 ,
GSM454840 ,
GSM454841 ,
GSM454842 ,
GSM454843 ,
GSM454844 ,
GSM454845 ,
GSM454846 ,
GSM494838 ,
GSM494839 ,
GSM494840 ,
GSM494841 ,
GSM494842 ,
GSM494843 ,
GSM494844 ,
GSM494845 ,
GSM494846 ,
GSM494847 ,
GSM494848 ,
GSM494849 ,
GSM494850 ,
GSM494851 ,
GSM509224 ,
GSM509225 ,
GSM509226 ,
GSM509227 ,
GSM509228 ,
GSM509229 ,
GSM509230 ,
GSM509231 ,
GSM509232 ,
GSM509233 ,
GSM509234 ,
GSM509235 ,
GSM509236 ,
GSM509237 ,
GSM542694 ,
GSM542695 ,
GSM542696 ,
GSM542697 ,
GSM561196 ,
GSM561197 ,
GSM561198 ,
GSM561199 ,
GSM561200 ,
GSM561201 ,
GSM561202 ,
GSM561203 ,
GSM561204 ,
GSM561205 ,
GSM561206 ,
GSM561207 ,
GSM561208 ,
GSM561209 ,
GSM561210 ,
GSM561211 ,
GSM561212 ,
GSM561213 ,
GSM561214 ,
GSM561215 ,
GSM561216 ,
GSM561217 ,
GSM561218 ,
GSM561219 ,
GSM561220 ,
GSM561221 ,
GSM561222 ,
GSM561223 ,
GSM561224 ,
GSM561225 ,
GSM561226 ,
GSM561227 ,
GSM561228 ,
GSM561229 ,
GSM561230 ,
GSM561231 ,
GSM561232 ,
GSM561233 ,
GSM561234 ,
GSM561235 ,
GSM561236 ,
GSM561237 ,
GSM561238 ,
GSM561239 ,
GSM561240 ,
GSM561241 ,
GSM561242 ,
GSM561243 ,
GSM561244 ,
GSM561245 ,
GSM561246 ,
GSM561247 ,
GSM561248 ,
GSM561249 ,
GSM561250 ,
GSM561251 ,
GSM561252 ,
GSM561253 ,
GSM561254 ,
GSM561255 ,
GSM561256 ,
GSM561257 ,
GSM561258 ,
GSM561259 ,
GSM561260 ,
GSM561261 ,
GSM561262 ,
GSM561263 ,
GSM561264 ,
GSM561265 ,
GSM561266 ,
GSM561267 ,
GSM561268 ,
GSM561269 ,
GSM561270 ,
GSM561271 ,
GSM561272 ,
GSM561273 ,
GSM561274 ,
GSM561275 ,
GSM561276 ,
GSM561277 ,
GSM561278 ,
GSM561279 ,
GSM561280 ,
GSM562228 ,
GSM562229 ,
GSM562230 ,
GSM562231 ,
GSM562232 ,
GSM562233 ,
GSM562234 ,
GSM562235 ,
GSM562236 ,
GSM562237 ,
GSM562238 ,
GSM562239 ,
GSM562240 ,
GSM562241 ,
GSM562242 ,
GSM562243 ,
GSM562244 ,
GSM562245 ,
GSM563845 ,
GSM563846 ,
GSM563847 ,
GSM563848 ,
GSM727015 ,
GSM727016 ,
GSM727017 ,
GSM727018 ,
GSM727019 ,
GSM727020 ,
GSM727021 ,
GSM727022 ,
GSM727023 ,
GSM727024 ,
GSM727025 ,
GSM727026 ,
GSM727027 ,
GSM727028 ,
GSM727029 ,
GSM727030 ,
GSM727031 ,
GSM727032 ,
GSM727033 ,
GSM727034 ,
GSM727035 ,
GSM727036 ,
GSM727037 ,
GSM727038 ,
GSM727039 ,
GSM727040 ,
GSM727041 ,
GSM727042 ,
GSM727043 ,
GSM727044 ,
GSM727045 ,
GSM727046 ,
GSM727047 ,
GSM727048 ,
GSM727049 ,
GSM727050 ,
GSM727051 ,
GSM727052 ,
GSM727053 ,
GSM727054 ,
GSM727055 ,
GSM727056 ,
GSM727057 ,
GSM727058 ,
GSM727061 ,
GSM727062 ,
GSM727063 ,
GSM727064 ,
GSM727065 ,
GSM727066 ,
GSM727067 ,
GSM727068 ,
GSM727069 ,
GSM727070 ,
GSM727071 ,
GSM727072 ,
GSM727073 ,
GSM727074 ,
GSM727075 ,
GSM727076 ,
GSM727077 ,
GSM727078 ,
GSM727079 ,
GSM727080 ,
GSM727081 ,
GSM727082 ,
GSM727083 ,
GSM727084 ,
GSM727085 ,
GSM727086 ,
GSM727087 ,
GSM727088 ,
GSM727089 ,
GSM727090 ,
GSM727091 ,
GSM727092 ,
GSM727093 ,
GSM727094 ,
GSM727095 ,
GSM727096 ,
GSM727097 ,
GSM727098 ,
GSM727099 ,
GSM727100 ,
GSM727101 ,
GSM727102 ,
GSM727103 ,
GSM727104 ,
GSM727105 ,
GSM727106 ,
GSM727107 ,
GSM727108 ,
GSM727109 ,
GSM727110 ,
GSM727111 ,
GSM727112 ,
GSM727113 ,
GSM727114 ,
GSM727115 ,
GSM727116 ,
GSM727117 ,
GSM727118 ,
GSM727119 ,
GSM727120 ,
GSM727122 ,
GSM727123 ,
GSM727124 ,
GSM727125 ,
GSM727126 ,
GSM727127 ,
GSM727128 ,
GSM727129 ,
GSM727130 ,
GSM727131 ,
GSM727132 ,
GSM727133 ,
GSM727134 ,
GSM727135 ,
GSM727136 ,
GSM727137 ,
GSM727138 ,
GSM727139 ,
GSM727140 ,
GSM727141 ,
GSM727142 ,
GSM727143 ,
GSM727144 ,
GSM727153 ,
GSM727154 ,
GSM727155 ,
GSM727156 ,
GSM727157 ,
GSM727158 ,
GSM727159 ,
GSM727160 ,
GSM727161 ,
GSM727162 ,
GSM727163 ,
GSM727164 ,
GSM727165 ,
GSM727166 ,
GSM727167 ,
GSM727168 ,
GSM727169 ,
GSM727170 ,
GSM727171 ,
GSM727172 ,
GSM731246 ,
GSM731247 ,
GSM825734 ,
GSM825735 ,
GSM825736 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (56)
GSE6680 Dynamics of replication-independent histone turnover in budding yeast
GSE8299 Genome-wide Replication-independent H3 Exchange Occurs Predominantly at Promoters and Implicates H3K56ac and Asf1
GSE9265 Whole genome recruitment of Rpb3 and Rpb4 in S.cerevesiae
GSE10836 Meiotic time course of Histone H3 occupancy
GSE10837 Meiotic time course of the trimethylation of the Lysine 4 of Histone H3 (H3K4me3) in a mutant Spo11F
GSE10838 Meiotic time course of Histone H3 occupancy in a mutant Spo11F
GSE10839 Meiotic time course of the trimethylation of the Lysine 4 of Histone H3 (H3K4me3) in a mutant clb5Delta-clb6Delta
GSE10840 Meiotic time course of the trimethylation of the Lysine 4 of Histone H3 (H3K4me3)
GSE11004 Transcriptomic regulation and methylation of the Lysine4 of Histone H3 during meiosis
GSE11377 The role of the central region of Ada2 in gene regulation
GSE12879 Meiotic DNA double strand breaks in wild-type and set1∆ cells
GSE13435 The Repertoire and Dynamics of Evolutionary Adaptations to Controlled Nutrient-Limited Environments in Yeast
GSE14565 Replication and active demethylation represent partially overlapping mechanisms for erasure of H3K4me3 in budding yeast
GSE16163 Meiotic time course of open chromatin as measured by FAIRE
GSE16784 Yeast RNase III triggers polyadenylation independent transcription termination
GSE17120 MRC1-Dependent Scaling of the Budding Yeast DNA Replication Timing Program
GSE17521 Features of cryptic promoters and their varied reliance on bromodomain-containing factors
GSE18191 Systematic identification of fragile sites via genome-wide location analysis of gamma-H2AX
GSE18256 Meiotic time course: open chromatin and expression profile
GSE19818 Saccharomyces cerevisiae GINS complex progression (Psf2) determined ChIP-chip time course through the cell cycle
GSE21787 Control of chromatin structure by Spt6 has different consequences in coding and regulatory regions
GSE22636 DSIF and RNA polymerase II CTD Phosphorylation Coordinate the Recruitment of Rpd3S to Actively Transcribed Genes
GSE22675 RNA Polymerase mapping during stress responses reveals widespread nonproductive transcription in yeast
GSE29403 A Universal RNA Polymerase II CTD Cycle Is Orchestrated by Complex Interplays Between Kinase, Phosphatase and Isomerase Enzymes Along Genes
GSE36691 Design and use of multiplexed chemostat arrays
GSE36794 A role for the nucleoporin Nup170p in chromatin structure and gene silencing [Agilent ChIP-chip]
GSE36795 A role for the nucleoporin Nup170p in chromatin structure and gene silencing
GSE37487 Histone H3 lysine 56 acetylation is required for formation of normal levels of meiotic DNA breaks in S. cerevisiae
GSE38491 A Key Role for Chd1 in Histone H3 Dynamics at the 3' Ends of Long Genes in Yeast (Flag-tagged histone H3 to total histone H3)
GSE38492 A Key Role for Chd1 in Histone H3 Dynamics at the 3' Ends of Long Genes in Yeast (H3K4me3 or H3K36me3 to input)
GSE38493 A Key Role for Chd1 in Histone H3 Dynamics at the 3' Ends of Long Genes in Yeast (Rpb3 to input)
GSE38540 A Key Role for Chd1 in Histone H3 Dynamics at the 3' Ends of Long Genes in Yeast
GSE39900 Spp1, a member of Set1 complex, promotes meiotic DSB formation by tethering histone H3K4 methylation sites to chromosome axes
GSE40563 The conserved SUMO ligase Zip3 protein associates differentially with meiotic double-strand break sites and reveals regional variations in the outcome of meiotic recombination
GSE47854 The Dynamics of Diverse Segmental Amplifications in Populations of Saccharomyces cerevisiae Adapting to Strong Selection
GSE51017 Polyploidy can drive rapid adaptation in yeast
GSE55082 Feedback control of Set1 protein levels is important for proper H3K4 methylation patterns
GSE58497 High-throughput identification of adaptive mutations in experimentally evolved yeast populations
GSE62880 FACT and Spt6 Prevent Cryptic Transcription by Impeding H2A.Z Loading in Gene Bodies
GSE67769 The Fitness Consequences of Aneuploidy Are Driven by Condition-Dependent Gene Effects
GSE71273 Spatial reorganization of telomeres in long-lived quiescent cells
GSE74443 Origin-Dependent Inverted-Repeat Amplification: Tests of a Model for Inverted DNA Amplification
GSE75258 Meiosis timecourse open chromatin dynamics as measured by FAIRE
GSE75263 Meiosis timecourse Rap1
GSE75623 Aneuploidy shortens replicative lifespan in Saccharomyces cerevisiae
GSE87401 Differential paralog divergence modulates evolutionary outcomes in yeast
GSE99117 Recombination at subtelomeres is regulated by physical distance, double strand break resection and chromatin status
GSE102790 Separable functions of the PHD finger protein Spp1 in the Set1 and the meiotic DSB forming complexes cooperate for meiotic DSB formation
GSE106499 Expanding heterochromatin reveals discrete subtelomeric domains delimited by chromatin landscape transitions
GSE110218 Endogenous single-strand DNA breaks at RNA polymerase II promoters in Saccharomyces cerevisiae
GSE143184 Telomerase function and binding at endogenous G-rich regions (ChIP)
GSE143187 Telomerase function and binding at endogenous G-rich regions
GSE220549 Roerr et al CGH data
Relations Alternative to
GPL10930
Data table header descriptions ID Agilent feature number
COL Column
ROW Row
SPOT_ID Spot identifier
CONTROL_TYPE Control type
GB_ACC GenBankAccession
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
GB_RANGE Accession.Version[start..end] (based on SGD October 2003 genome sequence)
Data table ID COL ROW SPOT_ID CONTROL_TYPE GB_ACC GENE_SYMBOL GENE_NAME ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION GB_RANGE 1
266
170
ScCGHBrightCorner
pos
2
266
168
DarkCorner
pos
3
266
166
DarkCorner
pos
4
266
164
DarkCorner
pos
5
266
162
DarkCorner
pos
6
266
160
DarkCorner
pos
7
266
158
DarkCorner
pos
8
266
156
DarkCorner
pos
9
266
154
DarkCorner
pos
10
266
152
DarkCorner
pos
11
266
150
DarkCorner
pos
12
266
148
A_75_P01725145
FALSE
YLL025W
sgd|YLL025W|sgd|YLL025W:385|sgd|YLL024C:2354
chr12:000095101-000095159
DOWNSTREAM
NC_001144.2[000095101..000095159]
13
266
146
A_75_P01760060
FALSE
RNH203
sgd|YLR154C|sgd|RNH203:-478|sgd|YLR153C:-1217
chr12:000448764-000448823
PROMOTER
NC_001144.2[000448764..000448823]
14
266
144
A_75_P01353403
FALSE
IES1
sgd|YFL013C|sgd|IES1:1947
chr6:000107948-000108007
INSIDE
NC_001138.3[000107948..000108007]
15
266
142
A_75_P01304758
FALSE
AFG3
sgd|YER017C|sgd|AFG3:234
chr5:000191524-000191582
INSIDE
NC_001137.2[000191524..000191582]
16
266
140
A_75_P01688477
FALSE
PAN3
sgd|YKL025C|sgd|PAN3:1737
chr11:000390151-000390210
INSIDE
NC_001143.3[000390151..000390210]
17
266
138
A_75_P02025438
FALSE
TIR4
sgd|YOR009W|sgd|TIR4:1603|sgd|YOR010C:1013
chr15:000345907-000345966
DOWNSTREAM
NC_001147.3[000345907..000345966]
18
266
136
A_75_P01312283
FALSE
FCY2
sgd|YER056C|sgd|FCY2:483
chr5:000267600-000267659
INSIDE
NC_001137.2[000267600..000267659]
19
266
134
A_75_P01431373
FALSE
YGR068C
sgd|YGR068C|sgd|YGR068C:487
chr7:000626569-000626627
INSIDE
NC_001139.3[000626569..000626627]
20
266
132
A_75_P01784551
FALSE
YSH1
sgd|YLR277C|sgd|YSH1:1948
chr12:000697519-000697576
INSIDE
NC_001144.2[000697519..000697576]
45220 6077 Kbytes .Supplementary data files not provided
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