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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Sep 19, 2006 |
| Title |
Okazaki Fly 22k Microarray v2 |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Drosophila melanogaster |
| Manufacturer |
Agilent |
| Manufacture protocol |
see manufacture's website
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| Contributor(s) |
Shigenobu S, Kobayashi S |
| Submission date |
Sep 17, 2006 |
| Last update date |
May 30, 2012 |
| Contact name |
Shuji Shigenobu |
| E-mail(s) |
[email protected]
|
| Phone |
+81-564-55-7670
|
| Organization name |
National Institute for Basic Biology
|
| Lab |
Functional Genomics Facility
|
| Street address |
Nishigonaka 38, Myodaiji
|
| City |
Okazaki |
| State/province |
Aichi |
| ZIP/Postal code |
444-8585 |
| Country |
Japan |
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| Samples (65)
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GSM136784, GSM136788, GSM136789, GSM175764, GSM175765, GSM176606
GSM176611, GSM244662, GSM244663, GSM2203772, GSM2203773, GSM2203774, GSM2203775, GSM2203776, GSM2203777, GSM2203778, GSM2203779, GSM2203780, GSM2203781, GSM2203782, GSM2203783, GSM2203784, GSM2203785, GSM2203786, GSM2203787, GSM2203788, GSM2203789, GSM2203790, GSM2203791, GSM2203792, GSM2203793, GSM2203794, GSM2203795, GSM2203796, GSM2203797, GSM2203798, GSM2203799, GSM2203800, GSM2203801, GSM2203802, GSM2203803, GSM2203804, GSM2203805, GSM2203806, GSM2203807, GSM2203808, GSM2203809, GSM2203810, GSM2203811, GSM2203812, GSM2203813, GSM2203814, GSM2203815, GSM2734362, GSM2734363, GSM2734364, GSM2734365, GSM2734366, GSM2734367, GSM2734368, GSM2734369, GSM2734370, GSM2734371, GSM2734372, GSM2734373
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| Series (5)
|
| GSE5873 |
sva53 mutant ovary |
| GSE7318 |
Overexpression of wild-type and dominant-negative form of tao-1 |
| GSE9679 |
Drosophila pole cell transcriptome in early embryogenesis (stage 4). |
| GSE83460 |
Drosophila PGC transcriptome |
| GSE102307 |
Drosophila melanogaster developmental transcriptome of whole body thorugh embryogenesis |
|
| Data table header descriptions |
| ID |
Feature Number |
| Row |
Feature location row |
| Col |
Feature location column |
| ControlType |
-1: negative control, 1: positive control |
| ProbeName |
An Agilent-assigned identifier for the probe synthesized on the microarray |
| SEQUENCE |
Sequence of oligonucletide probe |
| CLONE_ID |
FlyBase Gene ID |
| GeneSymbol |
Gene symbol |
| GeneFullName |
Gene full name |
| GO |
Gene Ontology terms |
| ProbeUID |
Unique integer for each unique probe in a design |
| ORF |
link to Entrez Gene |
| SPOT_ID |
identifier for spots without FlyBase ID or Gene symbol |
| Data table |
| ID |
Row |
Col |
ControlType |
ProbeName |
SEQUENCE |
CLONE_ID |
GeneSymbol |
GeneFullName |
GO |
ProbeUID |
ORF |
SPOT_ID |
| 1 |
1 |
1 |
1 |
CTRL:(+)Pro25G |
ATCATCGTAGCTGGTCAGTGTATCC |
|
|
|
|
0 |
|
CTRL:(+)Pro25G |
| 2 |
1 |
2 |
1 |
(+)Pro25G_onG3PDH570_10Ts |
ATCATCGTAGCTGGTCAGTGTATCCGTGTGAACCATGAGAAGTATGACAATTTTTTTTTT |
|
|
|
|
1 |
|
(+)Pro25G_onG3PDH570_10Ts |
| 3 |
1 |
3 |
-1 |
(-)3xSLv1 |
GCTAGCGAAAGCTAGCTTTTCGATCGGAAACGATCGTTTTCCAGTGACGAAAGTCACTGG |
|
|
|
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2 |
|
(-)3xSLv1 |
| 4 |
1 |
4 |
-1 |
(-)GD11 |
GCTAGCTAGCTAGCTAGCGCTAGCGAAAGCTAGCGCTAGCTAGCTAGCTAGCTTTTTTTT |
|
|
|
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3 |
|
(-)GD11 |
| 5 |
1 |
5 |
1 |
CTRL:(+)Pro25G |
ATCATCGTAGCTGGTCAGTGTATCC |
|
|
|
|
0 |
|
CTRL:(+)Pro25G |
| 6 |
1 |
6 |
1 |
(+)Pro25G_onG3PDH570_10Ts |
ATCATCGTAGCTGGTCAGTGTATCCGTGTGAACCATGAGAAGTATGACAATTTTTTTTTT |
|
|
|
|
1 |
|
(+)Pro25G_onG3PDH570_10Ts |
| 7 |
1 |
7 |
-1 |
(-)3xSLv1 |
GCTAGCGAAAGCTAGCTTTTCGATCGGAAACGATCGTTTTCCAGTGACGAAAGTCACTGG |
|
|
|
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2 |
|
(-)3xSLv1 |
| 8 |
1 |
8 |
-1 |
(-)GD11 |
GCTAGCTAGCTAGCTAGCGCTAGCGAAAGCTAGCGCTAGCTAGCTAGCTAGCTTTTTTTT |
|
|
|
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3 |
|
(-)GD11 |
| 9 |
1 |
9 |
1 |
CTRL:(+)Pro25G |
ATCATCGTAGCTGGTCAGTGTATCC |
|
|
|
|
0 |
|
CTRL:(+)Pro25G |
| 10 |
1 |
10 |
1 |
(+)Pro25G_onG3PDH570_10Ts |
ATCATCGTAGCTGGTCAGTGTATCCGTGTGAACCATGAGAAGTATGACAATTTTTTTTTT |
|
|
|
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1 |
|
(+)Pro25G_onG3PDH570_10Ts |
| 11 |
1 |
11 |
-1 |
(-)3xSLv1 |
GCTAGCGAAAGCTAGCTTTTCGATCGGAAACGATCGTTTTCCAGTGACGAAAGTCACTGG |
|
|
|
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2 |
|
(-)3xSLv1 |
| 12 |
1 |
12 |
-1 |
(-)GD11 |
GCTAGCTAGCTAGCTAGCGCTAGCGAAAGCTAGCGCTAGCTAGCTAGCTAGCTTTTTTTT |
|
|
|
|
3 |
|
(-)GD11 |
| 13 |
1 |
13 |
1 |
CTRL:(+)Pro25G |
ATCATCGTAGCTGGTCAGTGTATCC |
|
|
|
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0 |
|
CTRL:(+)Pro25G |
| 14 |
1 |
14 |
1 |
(+)Pro25G_onG3PDH570_10Ts |
ATCATCGTAGCTGGTCAGTGTATCCGTGTGAACCATGAGAAGTATGACAATTTTTTTTTT |
|
|
|
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1 |
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(+)Pro25G_onG3PDH570_10Ts |
| 15 |
1 |
15 |
-1 |
(-)3xSLv1 |
GCTAGCGAAAGCTAGCTTTTCGATCGGAAACGATCGTTTTCCAGTGACGAAAGTCACTGG |
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2 |
|
(-)3xSLv1 |
| 16 |
1 |
16 |
-1 |
(-)GD11 |
GCTAGCTAGCTAGCTAGCGCTAGCGAAAGCTAGCGCTAGCTAGCTAGCTAGCTTTTTTTT |
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3 |
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(-)GD11 |
| 17 |
1 |
17 |
1 |
CTRL:(+)Pro25G |
ATCATCGTAGCTGGTCAGTGTATCC |
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0 |
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CTRL:(+)Pro25G |
| 18 |
1 |
18 |
1 |
(+)Pro25G_onG3PDH570_10Ts |
ATCATCGTAGCTGGTCAGTGTATCCGTGTGAACCATGAGAAGTATGACAATTTTTTTTTT |
|
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1 |
|
(+)Pro25G_onG3PDH570_10Ts |
| 19 |
1 |
19 |
-1 |
(-)3xSLv1 |
GCTAGCGAAAGCTAGCTTTTCGATCGGAAACGATCGTTTTCCAGTGACGAAAGTCACTGG |
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2 |
|
(-)3xSLv1 |
| 20 |
1 |
20 |
-1 |
(-)GD11 |
GCTAGCTAGCTAGCTAGCGCTAGCGAAAGCTAGCGCTAGCTAGCTAGCTAGCTTTTTTTT |
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3 |
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(-)GD11 |
Total number of rows: 22575
Table truncated, full table size 3583 Kbytes.
| Supplementary data files not provided |
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