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GEO help: Mouse over screen elements for information. |
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| Status |
Public on May 12, 2009 |
| Title |
SMD Print_1548 Saccharomyces cerevisiae |
| Technology type |
spotted DNA/cDNA |
| Distribution |
non-commercial |
| Organism |
Saccharomyces cerevisiae |
| Manufacturer |
Stanford Functional Genomics Facility, Stanford School of Medicine |
| Manufacture protocol |
Material is transferred from microtiter plate wells to the slide surface by an automated print head
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| Support |
glass |
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| Submission date |
May 12, 2009 |
| Last update date |
May 12, 2009 |
| Contact name |
Andre Gerber |
| E-mail(s) |
[email protected]
|
| Phone |
+41 44 6337378
|
| Fax |
+41 44 6337364
|
| Organization name |
Swiss Federal Institute of Technology
|
| Department |
Institute of Pharmaceutical Science
|
| Street address |
Wolfgang Pauli Str. 10, HCI H396
|
| City |
ETH Hoenggerberg, Zuerich |
| ZIP/Postal code |
ZH |
| Country |
Switzerland |
| |
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| Samples (27)
|
GSM402426, GSM402427, GSM402428, GSM402429, GSM402430, GSM402431
GSM402432, GSM402433, GSM402959, GSM402962, GSM402963, GSM402965, GSM402966, GSM543587, GSM543588, GSM543589, GSM591191, GSM591192, GSM591193, GSM591194, GSM591198, GSM591199, GSM591200, GSM675166, GSM675167, GSM675168, GSM675169
|
| Series (10)
|
| GSE13654 |
Affinity purification of ribosomes and associated RNAs using tagged Rpl16a and Rpl16b |
| GSE13682 |
Affinity purification of ribosomes and associated RNAs from stress-treated cells using tagged Rpl16a and Rpl16b |
| GSE16103 |
Wild-type versus trf4, trf5, and trf4-DADA mutant cells |
| GSE16107 |
trf4, trf5, and trf4-DADA mutant cells gene expression; Trf4p X-RIP-Chip |
| GSE21850 |
Map1p overexpression versus control cells microarrays |
| GSE24002 |
Gis2 overexpression versus control cells |
| GSE24004 |
Gis2 mutant versus wild-type cells |
| GSE24005 |
Gis2 studies |
| GSE27311 |
SLF1 overexpression versus control cells |
| GSE27312 |
Slf1p and Sro9p affinity isolations; SLF1 overexpression |
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| Data table header descriptions |
| ID |
|
| MetaColumn |
|
| MetaRow |
|
| Column |
|
| Row |
|
| Reporter Name |
|
| Reporter Species |
|
| Reporter BioSequence [length] |
|
| SEQUENCE |
|
| Repoter Biosequence Type |
|
| Repoter BioSequence PolymerType |
|
| Reporter Group[role] |
|
| Reporter ControlType |
|
| ORF |
|
| CompositeSequence BioSequence [Standard Name] |
|
| SPOT_ID |
|
| Data table |
| ID |
MetaColumn |
MetaRow |
Column |
Row |
Reporter Name |
Reporter Species |
Reporter BioSequence [length] |
SEQUENCE |
Repoter Biosequence Type |
Repoter BioSequence PolymerType |
Reporter Group[role] |
Reporter ControlType |
ORF |
CompositeSequence BioSequence [Standard Name] |
SPOT_ID |
| 1 |
1 |
1 |
1 |
1 |
YAR002C-A_ORF |
Saccharomyces cerevisiae |
70 |
CTGGTGGCTGGTTGATTAAGGCTAAAACGAAGATTGACGTTGAATTCCAAGTGGGCTCTGATGAAAAGTT |
ss_oligo |
DNA |
Experimental |
|
YAR002C-A |
ERP1 |
|
| 172 |
1 |
1 |
1 |
10 |
MCD037853_CDP |
Methanococcus jannaschii |
|
|
unknown_sequence |
DNA |
Control |
control_unknown_type |
|
|
CONTROL |
| 177 |
1 |
1 |
6 |
10 |
YBR111W-A_JXN_EE20_2_ORF |
Saccharomyces cerevisiae |
70 |
GGTTTAAAATAGGTGCGTAGAACCCAAAGCATTAGAAATGGTATCGGATTCAACATCCCTTTGGCAAAAT |
ss_oligo |
DNA |
Experimental |
|
YBR111W-A |
SUS1 |
|
| 2925 |
1 |
3 |
18 |
10 |
YLR149C_ORF |
Saccharomyces cerevisiae |
70 |
TTTCTTCAGACTATCATGGTGTTTCCGCAAGAGCTTTTGAAAGTTTTCTCAGACCACCTTCAACGCCAGA |
ss_oligo |
DNA |
Experimental |
|
YLR149C |
|
|
| 8042 |
4 |
6 |
5 |
10 |
YLR367W_JXN_IE_1_ORF |
Saccharomyces cerevisiae |
70 |
AGATTCTTCAATACTAACATTTACTCCTTATTTAGGTTACATTGGCGAATTCGAATACATTGACGACCAC |
ss_oligo |
DNA |
Experimental |
|
YLR367W |
RPS22B |
|
| 8061 |
4 |
6 |
5 |
11 |
YMR063W_ORF |
Saccharomyces cerevisiae |
70 |
GGACTCACCTGAGATGTTATTGTTCACGGCCCTTTTTTCGCTGCCAACGTTCATGCTATGTCTTTTATGT |
ss_oligo |
DNA |
Experimental |
|
YMR063W |
RIM9 |
|
| 8080 |
4 |
6 |
5 |
12 |
IGR_CHR12:(COMPLEMENT(708167..708338))_8 |
Saccharomyces cerevisiae |
70 |
GTTTTTATAATCGACTACTTTATATCTATAACGAATTATTTAATTTTCTTCGATTTACTGTGTTTCTACC |
ss_oligo |
DNA |
Experimental |
|
|
|
IGR_CHR12:(COMPLEMENT(708167..708338))_8 |
| 8099 |
4 |
6 |
5 |
13 |
YOL086C_ORF |
Saccharomyces cerevisiae |
70 |
TTATTCAGATCCATCGGTGGTGAAGTCTTCATTGACTTCACTAAGGAAAAGGACATTGTCGGTGCTGTTC |
ss_oligo |
DNA |
Experimental |
|
YOL086C |
ADH1 |
|
| 8118 |
4 |
6 |
5 |
14 |
YPL250C_TIL_7_0_US200_ORF |
Saccharomyces cerevisiae |
70 |
TATTACTCATTTCACTGTTATTTTGCATCCACATCCACACCCGGGTGGTTTTGCAATTCGGTAATTACTC |
ss_oligo |
DNA |
Experimental |
|
YPL250C |
ICY2 |
|
| 8137 |
4 |
6 |
5 |
15 |
YPR014C_ORF |
Saccharomyces cerevisiae |
70 |
AAAATCTTTTCTGCGAAATTTCTAGCCGCTCTTCAGTTTCCGAAGTAAAGTCGCTGAGGGCGAAAAACAA |
ss_oligo |
DNA |
Experimental |
|
YPR014C |
|
|
| 8156 |
4 |
6 |
5 |
16 |
EMPTY |
Saccharomyces cerevisiae |
|
|
unknown_sequence |
DNA |
Control |
control_empty |
|
|
EMPTY |
| 8175 |
4 |
6 |
5 |
17 |
EMPTY |
Saccharomyces cerevisiae |
|
|
unknown_sequence |
DNA |
Control |
control_empty |
|
|
EMPTY |
| 8194 |
4 |
6 |
5 |
18 |
YCONTROL57 |
Saccharomyces cerevisiae |
|
|
unknown_sequence |
DNA |
Control |
control_unknown_type |
|
|
CONTROL |
| 7872 |
4 |
6 |
6 |
1 |
YBR078W_ORF |
Saccharomyces cerevisiae |
70 |
TTCTTCCTCTTCTTCTAAGAAGTCTAAGGGTGCTGCTCCAGAACTTGTTCCAGCCACTTCATTCATGGGT |
ss_oligo |
DNA |
Experimental |
|
YBR078W |
ECM33 |
|
| 2944 |
1 |
3 |
18 |
11 |
MCD037853_CDP |
Methanococcus jannaschii |
|
|
unknown_sequence |
DNA |
Control |
control_unknown_type |
|
|
CONTROL |
| 7891 |
4 |
6 |
6 |
2 |
MCD036998_CDP |
Methanococcus jannaschii |
|
|
unknown_sequence |
DNA |
Control |
control_unknown_type |
|
|
CONTROL |
| 7910 |
4 |
6 |
6 |
3 |
YDR130C_ORF |
Saccharomyces cerevisiae |
70 |
TAAACTGAATTCCATGCTGGCGAACGAAGGTAAGATACACAAAGCTAGTTTCCAGAAAAGTGTAAAATTT |
ss_oligo |
DNA |
Experimental |
|
YDR130C |
FIN1 |
|
| 7929 |
4 |
6 |
6 |
4 |
MCD037234_MORPH111011 |
Methanococcus jannaschii |
|
|
unknown_sequence |
DNA |
Control |
control_unknown_type |
|
|
CONTROL |
| 7948 |
4 |
6 |
6 |
5 |
YFL063W_ORF |
Saccharomyces cerevisiae |
70 |
ACGGCATACGCACACGGATGCTACAATAGTATATACTATCTCAACTTACCCTACTTTCACATTCCACTCC |
ss_oligo |
DNA |
Experimental |
|
YFL063W |
|
|
| 7967 |
4 |
6 |
6 |
6 |
MCM038579_CMM |
Methanococcus jannaschii |
|
|
unknown_sequence |
DNA |
Control |
control_unknown_type |
|
|
CONTROL |
Total number of rows: 10944
Table truncated, full table size 1653 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL8546_Print_1548.adf.gz |
1.0 Mb |
(ftp)(http) |
ADF |
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